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Search results for: optical coherence tomography, magnetic resonance imaging
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Optical coherence tomography and magnetic resonance imaging visual pathway evaluation in Wolfram syndrome
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Latent fingerprint imaging by spectroscopic optical coherence tomography
PublicationOptical coherence tomography (OCT) is a non-contact and non-invasive optical method for evaluating semitransparent and scattering objects. Its unique features, such as non-destructive 3D measurements of tested objects with a fast scanning rate, make this technique interesting for latent fingerprint reading, which is the subject of this paper. So far, OCT has not found widespread use for reading fingerprints directly from surfaces...
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Optical method for verification of homogeneity of phantoms for calibration of magnetic resonance
PublicationThe primary purpose of this study was to develop a laboratory photonic set-up for characterisation of homogeneity of gel phantoms for calibration of magnetic resonance. In this system, optical coherence tomography allows the detection of micro- and macroscopic heterogeneities of a structure. The set-up was used to perform measurements of agar and agar-carrageenan gels, which are the basis for more complex phantoms for magnetic...
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1D portable optical coherence tomography system
Publication—Imaging methods are an expanding branch of technology, which involves data acquisition and analysis of images for research and diagnostics. This paper has been devoted to the description of the optical design for a one-dimensional, portable optical coherence tomography (OCT) system. The Mach-Zehnder interferometer has been designed in the presented study. The description of the construction and applied hardware solutions have...
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Polarization-sensitive optical coherence tomography for ceramic materials inspection
PublicationCeramics production is looking for a fast, reliable and non-destructive method that can be implemented on site for defect detection and analysis. In this paper we present polarization-sensitive optical coherence tomography (PS-OCT) as a method for defect inspection. Proposed extensions to standard OCT provide additional information for complete characterization of tested object. We compare OCT and microscope imaging that can easily...
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Nanoparticles displacement analysis using optical coherence tomography
PublicationOptical coherence tomography (OCT) is a versatile optical method for cross-sectional and 3D imaging of biological and non-biological objects. Here we are going to present the application of polarization sensitive spectroscopic OCT system (PS-SOCT) for quantitative measurements of materials containing nanoparticles. The PS-SOCT combines the polarization sensitive analysis with time-frequency analysis. In this contribution the benefits...
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Advanced polarization sensitive analysis in optical coherence tomography
PublicationThe optical coherence tomography (OCT) is an optical imaging method, which is widely applied in variety applications. This technology is used to cross-sectional or surface imaging with high resolution in non-contact and non-destructive way. OCT is very useful in medical applications like ophthalmology, dermatology or dentistry, as well as beyond biomedical fields like stress mapping in polymers or protective coatings defects detection....
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Efficient signal processing in spectroscopic optical coherence tomography
PublicationSpectroscopic optical coherence tomography (SOCT) is an extension of a standard OCT technique, which allows to obtain depth-resolved, spectroscopic information on the examined sample. It can be used as a source of additional contrast in OCT images e.g. by encoding certain features of the light spectrum into the hue of the image pixels. However, SOCT require computation of time-frequency distributions of each OCT A-scan, what is...
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Advanced Monte Carlo simulator of the polarization-sensitive optical coherence tomography systems
PublicationSimulations of the optical coherence tomography (OCT) systems using the Monte Carlo method is a widely explored research area. However, there are several difficulties that need to be overcome in order to properly model the OCT imaging with the Monte Carlo algorithm. First of all, the temporal and the spatial coherence of the scattered light need to be considered, since OCT is based on the interference phenomenon. For the same reason,...
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Nanodiamonds Doped with Manganese for Applications in Magnetic Resonance Imaging
PublicationNanodiamonds (NDs) are emerging with great potential in biomedical applications like biomarking through fluorescence and magnetic resonance imaging (MRI), targeted drug delivery, and cancer therapy. The magnetic and optical properties of NDs could be tuned by selective doping. Therefore, we report multifunctional manganese-incorporated NDs (Mn-NDs) fabricated by Mn ion implantation. The fluorescent properties of Mn-NDs were tuned...
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Molecular Imaging and Nanotechnology—Emerging Tools in Diagnostics and Therapy
PublicationPersonalized medicine is emerging as a new goal in the diagnosis and treatment of diseases. This approach aims to establish differences between patients suffering from the same disease, which allows to choose the most effective treatment. Molecular imaging (MI) enables advanced insight into molecule interactions and disease pathology, improving the process of diagnosis and therapy and, for that reason, plays a crucial role in personalized...
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Simulating coherent light propagation in a random scattering materials using the perturbation expansion
PublicationMultiple scattering of a coherent light plays important role in the optical metrology. Probably the most important phenomenon caused by multiple scattering are the speckle patterns present in every optical imaging method based on coherent or partially coherent light illumination. In many cases the speckle patterns are considered as an undesired noise. However, they were found useful in various subsurface imaging methods such as...
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Computational Methods for Liver Vessel Segmentation in Medical Imaging: A Review
PublicationThe segmentation of liver blood vessels is of major importance as it is essential for formulating diagnoses, planning and delivering treatments, as well as evaluating the results of clinical procedures. Different imaging techniques are available for application in clinical practice, so the segmentation methods should take into account the characteristics of the imaging technique. Based on the literature, this review paper presents...
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Special techniques and future perspectives: Simultaneous macro- and micro-electrode recordings
PublicationThere are many approaches to studying the inner workings of the brain and its highly interconnected circuits. One can look at the global activity in different brain structures using non-invasive technologies like positron emission tomography (PET) or functional magnetic resonance imaging (fMRI), which measure physiological changes, e.g. in the glucose uptake or blood flow. These can be very effectively used to localize active patches...
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Obrazowanie parametryczne w badaniach mózgu metodami MRI/PET
PublicationCelem tej monografii jest przedstawienie technik obrazowania metodami tomografii rezonansu magnetycznego (MRI - Magnetic Resonance Imaging) i pozytonowej tomografii emisyjnej (PET - Positron Emission Tomography) w kontekście badań dynamicznych mózgu, szczególnie w zakresie syntezy obrazów parametrycznych opisujących jakościowo lub ilościowo przepływ mózgowy. Obrazowanie parametryczne określa technikę syntezy obrazów na podstawie...
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New method to monitor changes in the subarachnoid width and pial artery pulsation for physiological and clinical research
PublicationThere are several medical conditions associated with brain oedema such as traumatic brain injury, intoxication or tumors. Brain edema and related brain parenchyma expansion may lead to compression and subsequent injury of several brain structures. So far, the only method enabling detection and monitoring of the progress a cerebral oedema in a patient, has been monitoring of intracranial pressure (ICP) with a pressure probe inserted...
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Gold nanoparticles evaluation using functional optical coherence tomography
PublicationThe main object of this research was to assess the ability to characterize the gold nanoparticles using optical modalities like optical coherence tomography. Since the nanoparticles, especially gold one, have been very attractive for medical diagnosis and treatment the amount of research activities have been growing rapidly. The nanoparticles designed for different applications like contrast agents or drugs delivery change the...
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Detection of petroleum products using optical coherence tomography
PublicationIn this work, we present a novel method developed for the analysis of the properties of thin layers for detecting petroleum products on a water surface using a commercially available optical coherence tomography (OCT) system. The spectral density analysis of the signal from a spectroscopic OCT (S-OCT) enables us to perform the precision calculation of the thin layer thickness and other properties like homogeneity, and dispersion,...
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Microcrystalline diamond film evaluation by spectroscopic optical coherence tomography
PublicationThis study has focused on the microcrystalline diamond film (MCD) thickness evaluation. For this purpose, optical coherence tomography (OCT) enhanced by spectroscopic analysis has been used as a method of choice. The average thickness of the tested layer was about 1.5 µm, which is below the standard 2-point OCT resolution. In this case, the usefulness of the spectroscopic analysis was confirmed for the evaluation of the thickness...
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Optical Coherence Tomography for nanoparticles quantitative characterization
PublicationThe unique features of nanocomposite materials depend on the type and size of nanoparticles, as well as their placement in the composite matrices. Therefore the nanocomposites manufacturing process requires inline control over certain parameters of nanoparticles such as dispersion and concentration. Keeping track of nanoparticles parameters inside a matrix is currently a difficult task due to lack of a fast, reliable and cost effective...
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Detection system for optical coherence tomography: Czerny-Turner spectrometer
PublicationResearch methods based on spectral analysis have powerful impact on development in many field of science. Signal spectrum can be a source of useful and important data. It enables to obtain information about physical and chemical properties of tested materials. This paper has been devoted to describe optical design for high resolution spectrometer, which is significant element of optical coherence tomography (OCT) systems. Designed...
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Parallel multithread computing for spectroscopic analysis in optical coherence tomography
PublicationSpectroscopic Optical Coherence Tomography (SOCT) is an extension of Optical Coherence Tomography (OCT). It allows gathering spectroscopic information from individual scattering points inside the sample. It is based on time-frequency analysis of interferometric signals. Such analysis requires calculating hundreds of Fourier transforms while performing a single A-scan. Additionally, further processing of acquired spectroscopic information...
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Novel approach to modeling spectral-domain optical coherence tomography with Monte Carlo method
PublicationNumerical modeling Optical Coherence Tomography (OCT) systems is needed for optical setup optimization, development of new signal processing methods and assessment of impact of different physical phenomena inside the sample on OCT signal. The Monte Carlo method has been often used for modeling Optical Coherence Tomography, as it is a well established tool for simulating light propagation in scattering media. However, in this method...
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The Optical Coherence Tomography and Raman Spectroscopy for Sensing of the Bone Demineralization Process
PublicationThe presented research was intended to seek new optical methods to investigate the demineralization process of bones. Optical examination of the bone condition could facilitate clinical trials and improve the safety of patients. The authors used a set of complementary methods: polarization-sensitive optical coherence tomography (PS-OCT) and Raman spectroscopy. Chicken bone samples were used in this research. To stimulate in laboratory...
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Time-frequency analysis in optical coherence tomography for technical objects examination
PublicationOptical coherence tomography (OCT) is one of the most advanced optical measurement techniques for complex structure visualization. The advantages of OCT have been used for surface and subsurface defect detection in composite materials, polymers, ceramics, non-metallic protective coatings, and many more. Our research activity has been focused on timefrequency spectroscopic analysis in OCT. It is based on time resolved spectral analysis...
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Robert Bogdanowicz dr hab. inż.
PeopleRobert Bogdanowicz received his Ph.D. degree with honours in Electronics from the Gdansk University of Technology. He worked as a post-doc researcher in Ernst-Moritz-Arndt-Universität Greifswald Institut für Physik. He has initiated optical emission imaging of muti-magnetron pulsed plasma and contributed to the development of antibacterial implant coatings deposited by high-power impulse magnetron sputtering. He moved back to...
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Comment on "Quantitative comparison of analysis methods for spectroscopic optical coherence tomography"
PublicationIn a recent paper by Bosschaart et al. [Biomed. Opt. Express 4, 2570 (2013)] various algorithms of time-frequency signal analysis have been tested for their performance in blood analysis with spectroscopic optical coherence tomography sOCT). The measurement of hemoglobin concentration and oxygen saturation based on blood absorption spectra have been considered. Short time Fourier transform (STFT) was found as the best method for...
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Spectroscopic Optical Coherence Tomography for Thin Layer and Foil Measurements
PublicationThe main goal of this research was to assess if it is possible to evaluate the thickness of thin layers (both thin films on the surface and thin layers below the surface of the tested object) and foils using optical coherence tomography (OCT) for thickness assessment under the resolution of the standard commercially available OCT measurement system. In the proposed solution, light backscattered from the evaluated thin layer has...
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Nanodiamond phantoms mimicking human liver: perspective to calibration of T1 relaxation time in magnetic resonance imaging
PublicationPhantoms of biological tissues are materials that mimic the properties of real tissues. This study shows the development of phantoms with nanodiamond particles for calibration of T1 relaxation time in magnetic resonance imaging. Magnetic resonance imaging (MRI) is a commonly used and non-invasive method of detecting pathological changes inside the human body. Nevertheless, before a new MRI device is approved for use, it is necessary...
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Dispersion compensation in optical coherence tomography
PublicationDyspersja wprowadzana przez system optycznej tomografii koherentnej (OCT) oraz badane obiekty powoduje zniekształcenia fazowe w zależności od długości fali widma promieniowania zastosowanego źródła optycznego. powoduje to rozmycie obrazów otrzymanych przekrojów badanych materiałów pogarszając właściwości metrologiczne systemu OCT. W artykule przedstawiono metody kompensacji dyspersji w systemie OCT oraz przedyskutowano ich właściwości.
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Measurement of selected characteristics of low-coherence optical signal sources for optical coherence tomography
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Measurement of selected characteristics of low-coherence optical signal sources for optical coherence tomography
PublicationOCT to nowa metoda badania wewnętrznych struktur materiałów. Wśród wielu technik detekcji sygnału optycznego wykorzystywanych w OCT najpopularniejszą i najbardziej obiecującą jest OLCR (Opticla-Low Coherence Reflectomerty - reflektometria niskokoherentna). OLCR wykorzystuje szerokopasmowe źródła, których parametry, jak np.: charakterystyka widmowa, charakterystyka szumowa, determinują właściwości metrologiczne systemu OCT. W artykule...
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Polarization state analysis in optical coherence tomography
PublicationW artykule zaprezentowano metody analizy stanu polaryzacji światła w systemach optycznej tomografii kohererentnej. Przedstawiono różne konfiguracje systemu PS-OCT wraz z ich parametrami oraz właściwościami. Omówiono zasadę pomiaru stanu polaryzacji ściatła przy użyciu systemu PS-OCT oraz przeprowadzono dyskusję nad przydatnością metody do badania struktury materiałów silnie rozpraszających promieniowanie.
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Polarization sensitive optical coherence tomography system
PublicationW pracy pokazano system OCT czuły na stan polaryzacji do pomiaru właściwości dwójłomnych wybranych ośrodków rozpraszających światło. W systemie zastosowano detekcję zrównoważoną. Pokazano wstępne wyniki pomiarowe.
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Synthesized light source for optical coherence tomography
PublicationW artykule omówiono wpływ parametrów źródła promieniowania optycznego na właściwości systemu OCT. Szczególną uwagę zwrócono na źródła syntezowane. Omówiono charakterystykę źródła zbudowanego z dwóch różnych diod SLD. Przedstawiono wyniki pomiarów, które wskazują na możliwości znacznego polepszenia czułości i rozdzielczości systemu OCT wykorzystującego takie źródło.
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MAGNETIC RESONANCE IN CHEMISTRY
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Reactivation of seizure‐related changes to interictal spike shape and synchrony during postseizure sleep in patients
PublicationOBJECTIVE: Local field potentials (LFPs) arise from synchronous activation of millions of neurons, producing seemingly consistent waveform shapes and relative synchrony across electrodes. Interictal spikes (IISs) are LFPs associated with epilepsy that are commonly used to guide surgical resection. Recently, changes in neuronal firing patterns observed in the minutes preceding seizure onset were found to be reactivated during postseizure...
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Polarization sensitive optical coherence tomography with spectroscopic analysis
PublicationOptyczna tomografia koherentna (OCT) jest nieinwazyjną, nieniszczącą i bezkontaktową metodą obrazowania wewnętrznej struktury obiektów i materiałów rozpraszających. Dodatkowo w połączeniu z analizą stanu polaryzacji metoda ta umożliwia badanie lokalnych zmian optycznej anizotropii występującej w badanym obiekcie. W artykule przedstawiono zalety oraz ograniczenia metody oraz przedstawiono propozycję rozszerzenia analizy o badanie...
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Topics in Magnetic Resonance Imaging
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JOURNAL OF MAGNETIC RESONANCE IMAGING
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Nano-particle doped hydroxyapatite material evaluation using Spectroscopic Polarization Sensitive Optical Coherence Tomography
PublicationBio-ceramics such as hydroxyapatite (HAp) are widely used materials in medical applications, especially as an interface between implants and living tissues. There are many ways of creating structures from HAp like electrochemical assisted deposition, biomimetic, electrophoresis, pulsed laser deposition or sol-gel processing. Our research is based on analyzing the parameters of the sol-gel method for creating thin layers of HAp....
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Polarization sensitive optical coherence tomography for technical materials investigation
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Polarization sensitive optical coherence tomography for technical materials investigation
PublicationZaprezentowano system optycznej tomografii koherentnej z analizą stanu polaryzacji światła. System umożliwia nieniszczące i bezkontaktowe badanie wewnętrznej struktury materiałów warstwowych. Przedstawiono zastosowaną metodę analizy stanu polaryzacji promieniowana wstecznie rozproszonego od badanego obiektu.
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An Optical Low-Coherence System for 2-Dimensional Visualization of Thin Polymer Layers
PublicationW artykule omówiono zasadę działania i przedstawiono podstawowe właściwości systemu OCT (Optical Coherence Tomography). Na przykładzie folii polietylenowej przedyskutowano możliwości wykorzystania systemu do badanie wewnętrznej struktury warstwowej obiektów niebiologicznych. Przedstawiono i omówiono wyniki przeprowadzonych badań nad warstwowymi materiałami przeźroczystymi.
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Multilayered structures examination using polarization sensitive optical coherence tomography
PublicationW artykule przedstawiono wstępne wyniki badań struktur warstwowych z użyciem systemu optycznej tomografii koherentnej z analizą stanu poaryzacji (PS-OCT). Omówiono budowę systemu oraz zakres stosowalności metody do badania złożonych struktur warstwowych.
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Smart Approach for Glioma Segmentation in Magnetic Resonance Imaging using Modified Convolutional Network Architecture (U-NET)
PublicationSegmentation of a brain tumor from magnetic resonance multimodal images is a challenging task in the field of medical imaging. The vast diversity in potential target regions, appearance and multifarious intensity threshold levels of various tumor types are few of the major factors that affect segmentation results. An accurate diagnosis and its treatment demand strict delineation of the tumor affected tissues. Herein, we focus on...
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Reply to Comment on ‘Nanodiamond incorporated human liver mimicking phantoms: prospective calibration medium of magnetic resonance imaging’
PublicationDependence of the spin–lattice (T1) relaxation times on the nanodiamond concentration in human liver phantoms is discussed. Factors affecting stability and and reproducibility of these phantoms are presented. The need for comparative measurements on multiple MRI scanners for better understanding of potential variations in the obtained imaging data is emphasised.
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Małgorzata Szczerska prof. dr hab. inż.
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Internal imaging of concrete fracture based on elastic waves and ultrasound computed tomography
PublicationThe condition assessment of concrete structures belongs to the greatest challenges of non-destructive testing. Monitoring the fracture process of concrete and detecting cracks at the earliest possible stage is a vital aspect to ensure the safety of civil engineering objects. The use of ultrasound tomography enables imaging the internal structure of a tested element. This study aims at the visualization of fracture damage in concrete...
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Magnetic Resonance
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