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dr inż. Tomasz Kocejko
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- Assistant professor at Department of Biomedical Engineering
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total: 67
Catalog Publications
Year 2025
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Follow-up assessment of the microvascular function in patients with long COVID
PublicationLong COVID is a complex pathophysiological condition. However, accumulating data suggests that COVID-19 is a systemic microvascular endothelial dysfunction with different clinical manifestations. In this study, a microvascular function was assessed in long COVID patients (n = 33) and healthy controls (n = 30) using flow-mediated skin fluorescence technique (FMSF), based on measurements of nicotinamide adenine dinucleotide fluorescence...
Year 2024
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Continuous Biomedical Monitoring in VR Scenarios of Socially Smart and Safe Autonomous Vehicle Interaction
PublicationPedestrians, as vulnerable road users, pose safety challenges for autonomous vehicles (AVs). Their behavior, often unpredictable and subject to change, complicates AV-pedestrian interactions. To address this uncertainty, AV s can enhance safety by communicating their planned trajectories to pedestrians. In this research, we explore the interaction between pedestrians and autonomous vehicles within an industrial environment, focusing...
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Evaluating the Use of Edge Device Towards Fall Detection in Smart City Environment
PublicationThis paper presents the development and preliminary testing of a fall detection algorithm that leverages OpenPose for real-time human pose estimation from video feeds. The system is designed to function optimally within a range of up to 7 meters from ground-level cameras, focusing exclusively on detected human silhouettes to enhance processing efficiency. The performance of the proposed approach was evaluated using accuracy values...
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Evaluating the Use of Edge Devices for Detection and Tracking of Vehicles in Smart City Environment
PublicationThis paper introduces a Smart City solution designed to run on edge devices, leveraging NVIDIA's DeepStream SDK for efficient urban surveillance. We evaluate five object-tracking approaches, using YOLO as the baseline detector and integrating three Nvidia DeepStream trackers: IOU, NvSORT, and NvDCF. Additionally, we propose a custom tracker based on Optical Flow and Kalman filtering. The presented approach combines advanced machine...
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How Integration of a Brain-Machine Interface and Obstacle Detection System Can Improve Wheelchair Control via Movement Image
PublicationThis study presents a human-computer interaction combined with a brain-machine interface (BMI) and obstacle detection system for remote control of a wheeled robot through movement imagery, providing a potential solution for individuals facing challenges with conventional vehicle operation. The primary focus of this work is the classification of surface EEG signals related to mental activity when envisioning movement and deep relaxation...
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Real-Time Skin Quality Assessment System
PublicationThis thesis presents a real-time skin assessment system with the main aim of detecting inflammatory acne lesions and tracking skin conditions. A facial acne lesion detection algorithm was developed, using a pre-trained YOLOv8 model for lesion detection and a Mediapipe detector for face detection. The proposed solution aims to create a system used in smart mirrors to help users self-monitor and monitor their skin condition in real...
Year 2023
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Analysis of the Capability of Deep Learning Algorithms for EEG-based Brain-Computer Interface Implementation
PublicationMachine learning models have received significant attention for their exceptional performance in classifying electroencephalography (EEG) data. They have proven to be highly effective in extracting intricate patterns and features from the raw signal data, thereby contributing to their success in EEG classification tasks. In this study, we explore the possibilities of utilizing contemporary machine learning algorithms in decoding...
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Federated Learning in Healthcare Industry: Mammography Case Study
PublicationThe paper focuses on the role of federated learning in a healthcare environment. The experimental setup involved different healthcare providers, each with their datasets. A comparison was made between training a deep learning model using traditional methods, where all the data is stored in one place, and using federated learning, where the data is distributed among the workers. The experiment aimed to identify possible challenges...
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Optimization of the System for Determining the Volume of Tissue Needed for Breast Reconstruction
PublicationThis article presents techniques for reconstructing surfaces and volume calculations using a point cloud generated from 3D imaging. The main objective of this article was to optimize the voxel size for the most accurate representation of the surface of the female breast. We experimented with different methods for determining volume using images from the Intel D435i camera. In addition, we designed application and measurement station...
Year 2022
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Deep learning approach on surface EEG based Brain Computer Interface
PublicationIn this work we analysed the application of con-volutional neural networks in motor imagery classification for the Brain Computer Interface (BCI) purposes. To increase the accuracy of classification we proposed the solution that combines the Common Spatial Pattern (CSP) with convolutional network (ConvNet). The electroencephalography (EEG) is one of the modalities we try to use for controlling the prosthetic arm. Therefor in this...
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Educational Dataset of Handheld Doppler Blood Flow Recordings
PublicationVital signals registration plays a significant role in biomedical engineering and education process. Well acquired data allow future engineers to observe certain physical phenomena as well learn how to correctly process and interpret the data. This dataset was designed for students to learn about Doppler phenomena and to demonstrate correctly and incorrectly acquired signals as well as the basic methods of signal processing. This...
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Eye-tracking everywhere - software supporting disabled people in interaction with computers
PublicationIn this paper we present comprehensive system for communication with computer by gaze. One of the main assumptions behind this work was to provide solution that can be used with standard RGB webcam. The proposed comprehensive system included the eye tracking module and user interface for convenient gaze interaction with computer. As a result a fully functional application was developed. The average accuracy of the eye tracking...
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Using Convolutional Neural Networks for Corneal Arcus Detection Towards Familial Hypercholesterolemia Screening
PublicationFamilial hypercholesterolemia (FH) is a highly undiagnosed disease. Among FH patients, the onset of premature coronary artery disease is 13 times higher than in the general population. Early diagnosis and treatment is essential to prevent cardiovascular diseases and their complications, and to prolong life. One of the clinical criteria of FH is the occurrence of a corneal arcus (CA) among patients, especially those under 45 years...
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Using Disparity Map for Moving Object Position Estimation in Pan Tilt Camera Images
PublicationIn this paper we present the algorithm for rapid moving object position estimation in an images acquired from pan tilt camera. Detection of a moving object in a image acquired from a moving camera might be quite challenging. Standard methods that relay on analyzing two consecutive frames are not applicable due to the changing background. To overtake this problem we decided to evaluate the possibility of calculating a disparity...
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Using Synchronously Registered Biosignals Dataset for Teaching Basics of Medical Data Analysis – Case Study
PublicationMedical data analysis and processing strongly relies on the data quality itself. The correct data registration allows many unnecessary steps in data processing to be avoided. Moreover, it takes a certain amount of experience to acquire data that can produce replicable results. Because consistency is crucial in the teaching process, students have access to pre-recorded real data without the necessity of using additional equipment...
Year 2021
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Influence of preprocessing techniques on pulse pressure velocity determination
PublicationPulse Wave Velocity (PWV) is measured and utilized in many clinical applications. Recently, a wide research has been led to develop a cuff-less and continuous blood pressure method basing on PWV. However, in this application a decision on choosing an appropriate fiducial point of pulse wave (PW) waveform is necessary and substantial. It would allow to measure time parameters necessary to determine PWV. An influence of sampling...
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THE ROLE OF INFERENCE IN MOBILE MEDICAL APPLICATION DESIGN
PublicationIn the early 21st century, artificial intelligence began to be used to process medical information. However, before this happened, predictive models used in healthcare could only consider a limited number of variables, and only in properly structured and organised medical data. Today, advanced tools based on machine learning techniques - which, using artificial neural networks, can explore extremely complex relationships - and...
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Using deep learning to increase accuracy of gaze controlled prosthetic arm
PublicationThis paper presents how neural networks can be utilized to improve the accuracy of reach and grab functionality of hybrid prosthetic arm with eye tracing interface. The LSTM based Autoencoder was introduced to overcome the problem of lack of accuracy of the gaze tracking modality in this hybrid interface. The gaze based interaction strongly depends on the eye tracking hardware. In this paper it was presented how the overall the...
Year 2020
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Blood Pressure - Pulse Transit Time Relationships: Comparative Studies
PublicationA non-invasive and continuous blood pressure estimation could allow a better diagnosis and an earlier detection of various diseases. It could be performed using a photoplethysmography. However, it requires that a relation between blood pressure and pulse transit time is known. Eleven theoretical formulas were used in obtaining the simulated and noise free synthetic data. Then, they were utilized in validation of three, commonly...
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Deep Instance Segmentation of Laboratory Animals in Thermal Images
PublicationIn this paper we focus on the role of deep instance segmentation of laboratory rodents in thermal images. Thermal imaging is very suitable to observe the behaviour of laboratory animals, especially in low light conditions. It is an non-intrusive method allowing to monitor the activity of animals and potentially observe some physiological changes expressed in dynamic thermal patterns. The analysis of the recorded sequence of thermal...
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Design aspects of a low-cost prosthetic arm for people with severe movement disabilities
PublicationIn this paper the main aspects of mechanical design behind the low-cost prosthetic arm are presented. The fundamentals of a proper design has been defined to obtain functional 3D printed 5 degree of freedom (DOF) prosthesis. The designed prosthetic arm is a part of the hybrid interface with eye tracking movement control. The main focus was to create affordable but usable prosthesis which corresponds in size and weights to the human...
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Neural network based algorithm for hand gesture detection in a low-cost microprocessor applications
PublicationIn this paper the simple architecture of neural network for hand gesture classification was presented. The network classifies the previously calculated parameters of EMG signals. The main goal of this project was to develop simple solution that is not computationally complex and can be implemented on microprocessors in low-cost 3D printed prosthetic arms. As the part of conducted research the data set EMG signals corresponding...
Year 2019
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A Wearable System Developed to Monitor People Suffering from Vasovagal Syncope
PublicationA wearable system for monitoring non-invasively signals invaluable when examining person suffering from vasovagal syncope is presented in the paper. Following signals are continuously recorded: electrocardiogram, photopletysmogram, impedance cardiogram and electrodermal resistance.
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Can we rely on the pulse transit time - pressure relationship - models comparison
PublicationAn unobtrusive, noninvasive and continuous pressure measurement is invaluable however, still being under research and development. There are many attempts proposing an appropriate relationship between pulse pressure velocity and pressure. Fifteen different formulas, both theoretical and experimental, describing relation between blood pressure and crosssectional area of the vessel were examined. Using these formulas the relation...
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Evaluation of Facial Pulse Signals Using Deep Neural Net Models
PublicationThe reliable measurement of the pulse rate using remote photoplethysmography (PPG) is very important for many medical applications. In this paper we present how deep neural networks (DNNs) models can be used in the problem of PPG signal classification and pulse rate estimation. In particular, we show that the DNN-based classification results correspond to parameters describing the PPG signals (e.g. peak energy in the frequency...
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Optimal ECG lead for deriving respiratory signal
PublicationEDR is an interesting measuring technique that allows an indirect assessment of respiratory activity. This is an alternative solution to direct methods that are based on the measurement of air flow, which require a specialized sensor or even a system. However, due to inter-personal anatomical differences, the optimal ECG lead (placement of the electrodes) ensuring the best EDR signal quality is not fixed. An influence of ECG lead...
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Sensors integration in the smart home environment - a proposal to solve the problem with user identification
PublicationIn this preliminary study we, investigate the possibility of user recognition techniques suitable on smart home devices like chairs, beds, aiming for low–power, high accuracy and quick response time. We propose the two well know technique: voice speaker recognition and accelerometer signal from device mounted on the chair, and the third one optical system basing on IR LED transmitter/receiver circuit. The preliminary results proved...
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Using Eye-tracking to get information on the skills acquisition by the radiology residents
PublicationThis paper describes the possibility of monitoring the progress of knowledge and skills acquisition by the students of radiology. It is achieved by an analysis of a visual attention distribution patterns during image-based tasks solving. The concept is to use the eye-tracking data to recognize the way how the radiographic images are read by recognized experts, radiography residents involved in the training program, and untrained...
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Wykorzystanie interfejsów człowiek komputer w medycynie i rehabilitacji
PublicationRozwój technologii diametralnie zmienia niemal każdy aspekt ludzkiego życia. Maszyny, systemy informatyczne i komputery stały się codziennością, a interakcja między nimi jest możliwa dzięki staranie zaprojektowanym urządzeniom i programom, które stopniowo zacierają barierę w komunikacji pomiędzy człowiekiem i maszyną. Te urządzenia i programy nazywamy interfejsami człowiek-komputer.
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ZINTEGROWANY SYSTEM DOMOWEGO MONITORINGU PARAMETRÓW MEDYCZNYCH OSÓB STARSZYCH I CHORYCH
PublicationProponowane rozwiązania mają na celu wspomaganie osób starszych i chorych, tak by mogły jak najdłużej mieszkać i żyć samodzielnie ze zwiększonym poczuciem bezpieczeństwa, iż są nadzorowane i w razie nagłego zagrożenia życia nie pozostaną bez pomocy. System jednocześnie nie narusza poczucia zachowania prywatności i intymności, gdyż nie są używane do monitoringu kamery wizyjne czy też stały nasłuch audio. Dodatkowo gromadzone informacje...
Year 2018
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A Meta-Analysis of Pulse Arrival Time Based Blood Pressure Estimation
PublicationThe paper presents a preliminary meta-analysis of the sample correlation between pulse arrival time (PAT) and blood pressure (BP). The aim of the study was to verify sample correlation coefficient between PAT and BP using an affine model BP = a · P AT + b for systolic and diastolic blood pressure. The databases included in the search were the IEEE Xplore Digital Library, Springer Link and Google Scholar. Only papers from 2005 to...
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Blood Pressure Estimation Based on Blood Flow, ECG and Respiratory Signals Using Recurrent Neural Networks
PublicationThe estimation of systolic and diastolic blood pressure using artificial neural network is considered in the paper. The blood pressure values are estimated using pulse arrival time, and additionally RR intervals of ECG signal together with respiration signal. A single layer recurrent neural network with hyperbolic tangent activation function was used. The average blood pressure estimation error for the data obtained from 21 subjects...
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Electrical Propterties of Solution Mixtures for Bath Supervision in Ambient Assisted Living
PublicationImpedance properties of bath solution are compared. Any ingredient such as soap, shampoo or bathing salt changes bath-solution’s electrical properties eg. impedance. We have measured and analysed influence of typical bathing ingredients on electrical properties of the solution. We investigate impedance changes over frequency range from 100Hz tu 100kHz as it is most applicable for person detection. Electrical properties of bath...
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ReFlexeNN - the Wearable EMG Interface with Neural Network Based Gesture Classification
PublicationThe electromyographic activity of muscles was measured using a wireless biofeedback device. The aim of the study was to examine the possibility of creating an automatic muscle tension classifier. Several measurement series were conducted and the participant performed simple physical exercises - forcing the muscle to increase its activity accordingly to the selected scale. A small wireless device was attached to the electrodes placed...
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Smart Weighing Scale with Feet-Sampled ECG
PublicationIn a smart home, health and well-being monitoring systems could be embedded in everyday devices providing a pervasive care. A home bathroom scale is an example of such a device, typically used to measure body weight and very often its composition (e.g. body water/fat percentage). In this paper, we analyzed a potential use of the bathroom scale to measure electrocardiogram (ECG) from electrodes located on the scale's tile. In particular...
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Using Wearable Electronics to Estimate Usefulness of Heart Rate Variability for Bathing Person Identif Cation
PublicationIn this paper the possibility of person identification based on biosignal is investigated. The work focus on the analysis of the changes in intervals between successive R-waves of electrocardiogram (ECG) recorded by wearable electronics in form of a necklaces. The main idea behind this project is to find efficient tool which may prevent sudden consciousness loss episodes or even sudden death episodes related to rapid temperature...
Year 2017
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A body position influence on ECG derived respiration
PublicationAn influence of a human body position on ECG derived respiration (EDR) signal is presented in the paper. Examinations were performed during deep, suspended and normal breathing for eight people in four different body positions. EDR and thoracic impedance signals were compared using correlation and standard deviation coefficients. Obtained results have shown that it is possible to monitor breath activity of people being in different...
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Extending touch-less interaction with smart glasses by implementing EMG module
PublicationIn this paper we propose to use temporal muscle contraction to perform certain actions. Method: The set of muscle contractions corresponding to one of three actions including “single-click”, “double-click” “click-n-hold” and “non-action” were recorded. After recording certain amount of signals, the set of five parameters was calculated. These parameters served as an input matrix for the neural network. Two-layer feedforward neural...
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The role of EMG module in hybrid interface of prosthetic arm
PublicationNearly 10% of all upper limb amputations concern the whole arm. It affects the mobility and reduces the productivity of such a person. These two factors can be restored by using prosthetics. However, the complexity of human arm makes restoring its basic functions quite difficult. When the osseointegration and/or targeted muscle reinnervation (TMR) are not possible, different modalities can be used to control the prosthesis. In...
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Using wearable device for biomedical signal acquisition and processing
PublicationIn this paper we present the research conducted on synchronous measurements of biosignals. The experiment was conducted to evaluate the possibility of estimating vital signs based on eye tracking. Method: The eGlasses platform was used for acquisition of ECG, respiration rate, eye and pupil movement and blood pressure. Data were acquired in three 5 min. intervals during which a subject was performing certain tasks. The signals...
Year 2016
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Balance recognition on the basis of EEG measurement.
PublicationAlthough electroencephalography (EEG) is not typically used for verifying the sense of balance, it can be used for analysing cortical signals responsible for this phenomenon. Simple balance tasks can be proposed as a good indicator of whether the sense of balance is acting more or less actively. This article presents preliminary results for the potential of using EEG to balance sensing....
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EMG and gaze based interaction with graphic interface of smart glasses application
PublicationIn this paper we investigate the effectiveness of the interaction using eye tracking and electromyography. Smart glasses requires reliable interfaces for controlling the graphic content displayed directly in front of the user's eye. Presented research is related with the eGlasses project, which is focused on the development of an open platform in the form of multisensory electronic glasses and related interaction methods. One of...
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Enhanced Eye-Tracking Data: a Dual Sensor System for Smart Glasses Applications
PublicationA technique for the acquisition of an increased number of pupil positions, using a combined sensor consisting of a low-rate camera and a high-rate optical sensor, is presented in this paper. The additional data are provided by the optical movement-detection sensor mounted in close proximity to the eyeball. This proposed solution enables a significant increase in the number of registered fixation points and saccades and can be used...
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Estimation of blood pressure parameters using ex-Gaussian model
PublicationThe paper presents an example of model-based estimation of blood pressure parameters (onset, systolic and diastolic pressure) from continuous measurements. First, the signal was low pass filtered and its quality was estimated. Good quality periods were divided into beats using an electrocardiogram. Next, the beginning of each beat of the blood pressure signal was approximated basing on the function created from the sum of two independent...
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Estimation of respiration rate using an accelerometer and thermal camera in eGlasses
PublicationRespiration rate is a very important vital sign. Different methods of respiration rate measurement or estimation have been developed. However, especially interesting are those that enable remote and unobtrusive monitoring. In this study, we investigated the use of smart glasses for the estimation of respiration rate especially useful for indoors applications. Two methods were analyzed. The first one is based on measurements of...
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Performance Analysis of Interaction between Smart Glasses and Smart Objects Using Image-Based Object Identification
PublicationWe propose the use of smart glasses to collaborate with smart objects in the Internet of Things environment. Particularly we are focusing on new interaction methods and the analysis of acceptable reaction times in the process of object recognition using smart glasses. We evaluated the proposed method using user studies and experiments with three different smart glasses: Google Glass, Epson Moverio, and the developed eGlasses platform....
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Self diagnostics using smart glasses - preliminary study
Publicationn this preliminary study we analyzed the possibility of the reliable measurement of biomedical signals with some potential hardware extensions of smart glasses. Using specially designed experimental prototypes four category of biomedical signals were measured: electrocardiograms, electromyograms, electroencephalograms and respiration waveforms. Experi- ments with volunteers proved that using even simple construc- tion of sensors...
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The data exchange between smart glasses and healthcare information systems using the HL7 FHIR standard
PublicationIn this study we evaluated system architecture for the use of smart glasses as a viewer of information, as a source of medical data (vital sign measurements: temperature, pulse rate, and respiration rate), and as a filter of healthcare information. All activities were based on patient/device identification procedures using graphical markers or features based on visual appearance. The architecture and particular use cases were implemented...
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The evaluation of eGlasses eye tracking module as an extension for Scratch
PublicationIn this paper we present the possibility of using eGlasses eye tracking module as an extension for Scratch programming tool which is a visual programming language supporting computer skills learning. The main concept behind this project is to setup the interface for rapid interaction design. Eye tracking is a powerful tool for hands free communication but for that requires a dedicated software. This software is rarely tailored...
Year 2015
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A telemedical and an outpatient thoracic impedance measurements - a validation algorithm of the electrodes placement
PublicationThis paper presents the algorithm for validation of electrodes locations for the thoracic impedance measurements. In particular the presented algorithm was designed to perform the telemetric sleep apnea monitoring. One of the problems, during the clinical tests of a developed device, was to preserve the repeatability of measurements. It strongly depended on the appropriate electrodes placement on the examined person’s thorax. It...
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