Search results for: phylogenetics

• MOLECULAR PHYLOGENETICS AND EVOLUTION

  Journals

  ISSN: 1055-7903 , eISSN: 1095-9513

• Ahmer Bin Hafeez

  People

  I have experience in Microbiology & Computational Biology, particularly bioinformatics, homology modeling, phylogenetics, structural biology, and drug discovery. Currently, my interest lies in translatable omics studies and drug discovery against novel protein targets involved in cancer and infectious diseases and Host-Pathogen PPIs. My aim involves the use of computational methods for the identification of novel targets and to...

• Analyzing sets of phylogenetic trees obtained from bayesian MCMC process using topology metrics

  Publication

  • D. Bogdanowicz

  - Year 2009

  The reconstruction of evolutionary trees is one of the primary objectives in phylogenetics. Such a tree represents historical evolutionary relationship between different species or organisms. Tree comparisons are used for multiple purposes, from unveiling the history of species to deciphering evolutionary associations amongorganisms and geographical areas.In the paper, we describe a general method for comparing hylogenetic trees....

• Analyzing sets of phylogenetic trees using metrics

  Publication

  • D. Bogdanowicz

  - Applicationes Mathematicae - Year 2011

  The reconstruction of evolutionary trees is one of the primary objectives in phylogenetics. Such a tree represents historical evolutionary relationships between different species or organisms. Tree comparisons are used for multiple purposes, from unveiling the history of species to deciphering evolutionary associations among organisms and geographical areas. In this paper, we describe a general method for comparing phylogenetictrees...

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• TreeCmp: Comparison of Trees in Polynomial Time

  Publication

  • D. Bogdanowicz
  • K. Giaro
  • B. Wróbel

  - Evolutionary Bioinformatics - Year 2012

  Metryki filogenetyczne umożliwiają ocenę jakości wyników analizy filogenetycznej oraz wiarygodności algorytmów przeprowadzających taką analizę. Aplikacja TreeCmp oferuje efektywne, wielomianowe implementacje ośmiu takich metryk (dla drzew nieukorzenionych i zawierających korzeń) zdefiniowanych dla dowolnych filogenez (nie koniecznie binarnych). Program ten jako pierwszy umożliwia wyznaczanie nowych metryk, definiowanych w oparciu...

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