matK sequences alignment of Oncidium Sw. species - Open Research Data - Bridge of Knowledge

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matK sequences alignment of Oncidium Sw. species

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Description

Comparison of matK gene sequences of 28 species of Oncidium Sw..  Alignment was created using Clustal Omega ver.1.2.4 in SnapGene software 7.1.1.   

Consensus Threshold: >50%,  Compare to: the consensus

Samples were obtained from the Department of Plant Taxonomy and Nature Conservation, University of Gdańsk. 

The list of samples:

O.sphacelatum, O.odoratum, O.croesus, O.longipes, O.plymotodium, O.hastatum_2, O.edwallii, O.pulvinatum, O.heteranthum, O.bauert, O.incuvum, O.lineoligerum, O.maculatum, O.hastilabium, O.leucochilum, O.toachicum, O.altissimum, O.warscewicit, O.endocharis, O.tipuloides, O.obryzatum, O.ochmatochilum, O.pardothyrsus, O.planilabre, O.hyphaematicum:, O.cheirophorum, O.macrorhynchum, O.ornithorhynchum

Dataset file

matK_Oncidium.nxs
228.5 kB, S3 ETag 08fa665dc40cdc1f2bffbfb24dcce59a-1, downloads: 39
The file hash is calculated from the formula
hexmd5(md5(part1)+md5(part2)+...)-{parts_count} where a single part of the file is 512 MB in size.

Example script for calculation:
https://github.com/antespi/s3md5

File details

License:
Creative Commons: by 4.0 open in new tab
CC BY
Attribution

Details

Year of publication:
2024
Verification date:
2024-02-29
Dataset language:
English
Fields of science:
  • biological sciences (Natural sciences)
DOI:
DOI ID 10.34808/37w9-5n83 open in new tab
Verified by:
Gdańsk University of Technology

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Version this document has several versions

DOI 10.34808/wq8k-wj90 represents the latest version of the data.

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