Wyszukiwarka
Performance of extended Lagrangian schemes for molecular dynamics simulations with classical polarizable force fields and density functional theory
Abstrakt
Iterative energy minimization with the aim of achieving self-consistency is a common feature of Born-Oppenheimer molecular dynamics (BOMD) and classical molecular dynamics with polarizable force fields. In the former, the electronic degrees of freedom are optimized, while the latter often involves an iterative determination of induced point dipoles. The computational effort of the self-consistency procedure can be reduced by re-using converged solutions from previous time steps. However, this must be done carefully, as not to break time-reversal symmetry, which negatively impacts energy conservation. Self-consistent schemes based on the extended Lagrangian formalism, where the initial guesses for the optimized quantities are treated as auxiliary degrees of freedom, constitute one elegant solution. We report on the performance of two integration schemes with the same underlying extended Lagrangian structure, which we both employ in two radically distinct regimes—in classical molecular dynamics simulations with the AMOEBA polarizable force field and in BOMD simulations with the Onetep linear-scaling density functional theory (LS-DFT) approach. Both integration schemes are found to offer significant improvements over the standard (unpropagated) molecular dynamics formulation in both the classical and LS-DFT regimes.
Cytowania
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2 6
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Web of Science
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2 6
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Autorzy (6)
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Valerio Vitale
- University of Southampton School of Chemistry
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Alex Albaugh
- University of California, Berkeley Department of Chemical and Biomolecular Engineering
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Anders Niklasson
- Los Alamos National Laboratory Theoretical Division
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Teresa Head-Gordon
- University of California, Berkeley Department of Chemical and Biomolecular Engineering
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Chris-Kriton Skylaris
- University of Southampton .
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Pełna treść
- Wersja publikacji
- Accepted albo Published Version
- DOI:
- Cyfrowy identyfikator dokumentu elektronicznego (otwiera się w nowej karcie) 10.1063/1.4978684
- Licencja
- Copyright (2017 AIP Publishing)
Słowa kluczowe
Informacje szczegółowe
- Kategoria:
- Publikacja w czasopiśmie
- Typ:
- artykuł w czasopiśmie wyróżnionym w JCR
- Opublikowano w:
-
JOURNAL OF CHEMICAL PHYSICS
nr 146,
wydanie 12,
strony 1 - 17,
ISSN: 0021-9606 - Język:
- angielski
- Rok wydania:
- 2017
- Opis bibliograficzny:
- Vitale V., Dziedzic J., Albaugh A., Niklasson A., Head-Gordon T., Skylaris C.: Performance of extended Lagrangian schemes for molecular dynamics simulations with classical polarizable force fields and density functional theory// JOURNAL OF CHEMICAL PHYSICS. -Vol. 146, iss. 12 (2017), s.1-17
- DOI:
- Cyfrowy identyfikator dokumentu elektronicznego (otwiera się w nowej karcie) 10.1063/1.4978684
- Weryfikacja:
- Politechnika Gdańska
wyświetlono 115 razy
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