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Gdański Uniwersytet Medyczny
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Open Research Data
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Vident-real: an intra-oral video dataset for multi-task learning
Open Research DataWe introduce Vident-real, a large dataset of 100 video sequences of intra-oral scenes from real conservative dental treatments performed at the Medical University of Gdańsk, Poland. The dataset can be used for multi-task learning methods including:
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Genetic and Proteomic data
Open Research DataGenetic and Proteomic data (shotgun proteomics) for Uroseptic and UTI E. coli strains.
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Validation of lumbar spine finite element model
Open Research DataThe functional biomechanics of the lumbar spine have been better understood by finite element method (FEM) simulations. However, there are still areas where the behavior of soft tissues can be better modeled or described in a different way. The purpose of this research is to develop and validate a lumbar spine section intended for biomechanical research....
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Results of nanoindentation, XRD and microscopic studies of bacterial cellulose
Open Research DataThe archive contains the results of research on BNC bacterial biocellulose, which was modified in two ways. When BNC was synthesized, it was subjected to in situ modification involving the addition of hyuloronic acid to the bacterial medium. The second way of ex situ modification consisted of soaking the BNC in water and then convectionally drying it...
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3D intact knee model used in analysis of the medial meniscus biomechanics in the osteoarthritic knee joint - input text file for computation
Open Research DataThe finite element method was used to simulate the stance phase of the gait cycle. An intact knee model with original geometry and material parametetrs was prepared based on magnetic resonance scans of the left knee joint of a healthy volunteer. The file was created in Abaqus 6.14-2, but can be read in a text editor.
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3D knee model M with decreased material parameters of the cartilage and menisci - input text file for computation
Open Research DataThe finite element method was used to simulate the stance phase of the gait cycle. An intact knee model was prepared based on magnetic resonance scans of the left knee joint of a healthy volunteer. In the model M the material parameters of cartilage and menisci were reduced to simulate degenerative changes in the medial knee osteoarthritis. The file...
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Bending test results of first metatarsophalangeal joint after arthrodesis with medially or dorsally positioned locking plate and lag screw.
Open Research DataThe Dataset contains the results of the bending test of first metatarsophalangeal (MTP1) joint specimens after arthrodesis.
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Displacements of bones during bending test of first metatarsophalangeal joint after arthrodesis with medially or dorsally positioned locking plate and lag screw.
Open Research DataThe Dataset contains the values of displacements of bone control points during the bending test of first metatarsophalangeal (MTP1) joint specimens after arthrodesis.
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3D model of osteoarthritic (OA) knee joint for analysis of the medial meniscus biomechanics - input text file for computation
Open Research DataThe finite element method was used to simulate the stance phase of the gait cycle. An intact knee model was prepared based on magnetic resonance scans of the left knee joint of a healthy volunteer. In the OA model thickness of articular cartilage and material parameters of the cartilage and menisci were reduced to simulate degenerative changes in the...
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The topography of various sialoliths by scanning electron microscopy
Open Research DataThis dataset contains SEM micrographs taken for salivary gland stones (sialolith) extracted during joint studies between the Medical University of Gdansk and Gdansk University of Technology. Three different types of stones were examined, as discussed in the article: 10.1111/odi.13708
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Maximum forces in tendon connections for an anchor without pin in the single-side sample experiment
Open Research DataThe main objective of the all study was to assess the load capacity of a new implant device for knotless tendon anastomosis. During this series of experiments the load capacity of the anchoring element without a pin (see figure 1) was examined. Tendons from fresh swine legs (commercially available) served as the biological material. All samples were...
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Maximum forces in tendon connections for an anchor with pin in the single-side sample experiment
Open Research DataThe main objective of the all study was to assess the load capacity of a new implant device for knotless tendon anastomosis. During this series of experiments the load capacity of the anchoring element with a pin (see figure 1) was examined. Tendons from fresh swine legs (commercially available) served as the biological material. All samples were subjected...
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Forming of the gap in tendon sutures with the Kessler suture
Open Research DataThe main objective of the all study was to assess the load capacity of a new implant device for knotless tendon anastomosis. During this series of experiments the gap formation process between the fronts of the connected tendons was observed. Tendons from fresh swine legs (commercially available) served as the biological material. The tendon juncture...
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Forming of the gap in tendon sutures with an anchor without a pin
Open Research DataThe main objective of the all study was to assess the load capacity of a new implant device for knotless tendon anastomosis. During this series of experiments the gap formation process between the fronts of the connected tendons was observed. Tendons from fresh swine legs (commercially available) served as the biological material. The tendon juncture...
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Forming of the gap in tendon sutures with an anchor with a pin
Open Research DataThe main objective of the all study was to assess the load capacity of a new implant device for knotless tendon anastomosis. During this series of experiments the gap formation process between the fronts of the connected tendons was observed. Tendons from fresh swine legs (commercially available) served as the biological material. The tendon juncture...
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Maximum forces in tendon connections for an anchor with a pin in the full sample experiment
Open Research DataThe main objective of the all study was to assess the load capacity of a new implant device for knotless tendon anastomosis. During this series of experiments the load capacity of the anchoring element with a pin (see figure 1) was examined. Tendons from fresh swine legs (commercially available) served as the biological material. All samples were subjected...
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Bacteria in water and bottom sediments in Puck Bay area (Baltic Sea)
Open Research DataThe samples for testing were collected from 5th of November 2007 to 14th of December 2007. In total, there were 147 samples collected from 30 sites, including 57 water samples and 90 sediment samples. Water was sampled from the surface and directly above the layer of bottom sediment. Sediments, regardless of length of the sample core were sampled from...
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Bacteriological monitoring of coastal sea waters – Gulf of Gdańsk (Baltic Sea) in 2009
Open Research DataThe dataset contains the results of a bacteriological and physicochemical studies of Gdansk Bay coastal waters within the administrative boundaries of Gdańsk city in 2009. The examined material consisted of water samples collected from 15 sampling points. The aim of this study was to determine the number of Escherichia coli and the number of intestinal...
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Bacteriological monitoring of coastal sea waters – Gulf of Gdańsk (Baltic Sea) in 2010
Open Research DataThe dataset contains the results of a bacteriological and physicochemical studies of Gdansk Bay coastal waters within the administrative boundaries of Gdańsk city in 2010. The examined material consisted of water samples collected from 15 sampling points. The aim of this study was to determine the number of Escherichia coli and the number of intestinal...
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Bacteria in the area of influence of sewage tretment plant Gdynia - Dębogórze in 2009
Open Research DataThe dataset contains the results of microbiological testing of water from Gulf of Puck in surrounding area of Mechelinki town. The aim of the test was to assess the influence of discharging communal sewage into the waters of Gulf of Gdańsk by sewage pipeline located in Mechelinki town area, on the sanitary condition of these waters. The samples were...
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Microbiological analysis of sea water and bottom sediments in Kosakowo – Gdańsk profile
Open Research DataThis dataset contains the results of microbiological analysis of sea water and bottom sediments in Kosakowo – Gdańsk profile in 2013 - 2014 . The tested material consisted of water samples (surface water and bottom water) and bottom sediment samples. Water and sediment samples were analysed for the following: number of Enterobacteriaceae genus bacteria,...
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Microbiological condition of sediments and bottom water in the area of Gdańsk Deep in Gulf of Gdańsk
Open Research DataThis dataset contains the results of microbiological analysis of bottom water and bottom sediments in the area of Gdańsk Deep in Gulf of Gdańsk. The tested samples were collected at 5 sites on 15th of December 2007. 5 samples of bottom water and 10 samples of sediments were collected for microbiological testing. Each of these samples were analysed for...
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Bacteriological monitoring of coastal sea waters – Gulf of Gdańsk (Baltic Sea) in 2008
Open Research DataThe dataset contains the results of a bacteriological and physicochemical studies of Gdansk Bay coastal waters within the administrative boundaries of Gdańsk city in 2008. The examined material consisted of water samples collected from 15 sampling points. The aim of this study was to determine the number of Escherichia coli and the number of intestinal...
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Bacteria in the area of influence of sewage tretment plant Gdynia - Dębogórze
Open Research DataThe dataset contains the results of microbiological analysis of sea waters from Gulf of Puck in area of municipal sewage discharges from the Gdynia Dębogórze sewage treatment plant. The tested material consisted of water samples (surface water and bottom water) collected in 2012. The number of Enterobacteriaceae genus bacteria, number of Escherichia...
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Microorganisms in the air within the Gdańsk-Szadółki landfill and adjacent area in 2015
Open Research DataThis data set contains the results of microbiological examination of air samples collected at Gdańsk Szadółki Landfill (Poland) in 2015. The range of examination included qualitative and quantitative assesment of selected species of bacteria and mold fungi, with particular focus on pathogenic and potentially pathogenic fungi and bacteria. The collected...
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Microorganisms in the air within the Gdańsk-Szadółki landfill and adjacent area in 2018
Open Research DataThis data set contains the results of microbiological examination of air samples collected at Gdańsk Szadółki Landfill (Poland) in 2018. The range of examination included qualitative and quantitative assesment of selected species of bacteria and mold fungi, with particular focus on pathogenic and potentially pathogenic fungi and bacteria. The collected...
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Microorganisms in the air within the Gdańsk-Szadółki landfill and adjacent area in 2016
Open Research DataThe data collection contains the results of microbiological examination of air samples collected at Gdańsk Szadółki Landfill (Poland). The Gdańsk Szadółki Landfill is one of the biggest of facilities of this type in the country. It occupies an area of 75 hectares and serves around 500 thousand of local residents. The landfill receives around 250 million...
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Microorganisms in the air within the Gdańsk-Szadółki landfill and adjacent area in 2017
Open Research DataThis data set contains the results of microbiological examination of air samples collected at Gdańsk Szadółki Landfill (Poland) in 2017. The range of examination included qualitative and quantitative assesment of selected species of bacteria and mold fungi, with particular focus on pathogenic and potentially pathogenic fungi and bacteria. The collected...
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Microorganisms in the air within the Gdańsk-Szadółki landfill and adjacent area in 2019
Open Research DataThis data set contains the results of microbiological examination of air samples collected at Gdańsk Szadółki Landfill (Poland) in 2019. The range of examination included qualitative and quantitative assesment of selected species of bacteria and mold fungi, with particular focus on pathogenic and potentially pathogenic fungi and bacteria. The collected...
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The results of physico – chemical and microbiological testing of watercourses around the municipality of Gdańsk in 2009
Open Research DataThe dataset contains the results of a bacteriological and physico-chemical study of watercourses waters within the administrative boundaries of Gdańsk city in 2009. The examined material consisted of water samples collected from 16 watercourses within the administrative boundaries of Gdańsk, Poland.
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The results of physico – chemical and microbiological testing of watercourses around the municipality of Gdańsk in 2011
Open Research DataThe dataset contains the results of a bacteriological and physico-chemical study of watercourses waters within the administrative boundaries of Gdańsk city in 2011. The examined material consisted of water samples collected from 16 watercourses within the administrative boundaries of Gdańsk, Poland.
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The results of physico – chemical and microbiological testing of watercourses around the municipality of Gdańsk in 2009
Open Research DataThe dataset contains the results of a bacteriological and physico-chemical study of watercourses waters within the administrative boundaries of Gdańsk city in 2009. The examined material consisted of water samples collected from 16 watercourses within the administrative boundaries of Gdańsk, Poland.
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Bacteriological and physicochemical monitoring of inland surface waters within the administrative boundaries of Gdańsk city in 2010
Open Research DataThe dataset containst the results of a bacteriological and physico-chemical study of inland surface waters within the administrative boundaries of Gdańsk city in 2010.The examined material consisted of water samples collected from four lakes located within the administrative boundaries of Gdańsk, Poland.
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The results of physico – chemical and microbiological testing of watercourses around the municipality of Gdańsk in 2010
Open Research DataThe dataset contains the results of a bacteriological and physico-chemical study of watercourses waters within the administrative boundaries of Gdańsk city in 2010. The examined material consisted of water samples collected from 16 watercourses within the administrative boundaries of Gdańsk, Poland.
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Bacteriological and physicochemical monitoring of inland surface waters within the administrative boundaries of Gdańsk City in 2008
Open Research DataThe dataset containst the results of a bacteriological and physico-chemical study of inland surface waters within the administrative boundaries of Gdańsk city in 2008. The examined material consisted of water samples collected from four lakes located within the administrative boundaries of Gdańsk, Poland.
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Bacteriological and physicochemical monitoring of inland surface waters within the administrative boundaries of Gdańsk City in 2009
Open Research DataThe dataset containst the results of a bacteriological and physico-chemical study of inland surface waters within the administrative boundaries of Gdańsk city in 2009. The examined material consisted of water samples collected from four lakes located within the administrative boundaries of Gdańsk, Poland.
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Bacteriological and physicochemical monitoring of inland surface waters within the administrative boundaries of Gdańsk City in 2011
Open Research DataThe dataset containst the results of a bacteriological and physico-chemical study of inland surface waters within the administrative boundaries of Gdańsk city in 2011. The examined material consisted of water samples collected from four lakes located within the administrative boundaries of Gdańsk, Poland.
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X-ray Photoelectron Spectroscopy studies of salivary gland stones
Open Research DataThis dataset contains the high-resolution XPS studies for 23 cross-sections of salivary gland stones. The sialoliths were cut to determine the differences in composition between various regions: core (labeled as R), interlayer (labeled as P) and sialolith surface (labeled as Z).
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SEM micrographs and photos of salivary gland stones
Open Research DataThis dataset contains SEM micrographs and high-resolution photographs taken for salivary gland stones (sialolith) extracted during joint studies between Medical University of Gdansk and Gdansk University of Technology.