Search results for: Bioinformatics
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BIOINFORMATICS
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PROTEINS-STRUCTURE FUNCTION AND BIOINFORMATICS
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BRIEFINGS IN BIOINFORMATICS
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Current Bioinformatics
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Trends in Bioinformatics
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Advances in Bioinformatics
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Comparison of mass spectrometry data and bioinformatics predictions to assess the bona fide localization of proteins identified in cell wall proteomics studies
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BMC BIOINFORMATICS
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Bioinformatics and Biology Insights
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Journal of Integrative Bioinformatics
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GENOMICS PROTEOMICS & BIOINFORMATICS
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Current Protocols in Bioinformatics
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IPSJ Transactions on Bioinformatics
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Mathematical Biology and Bioinformatics
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NAR Genomics and Bioinformatics
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Open Bioinformatics Journal
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International Journal of Bioinformatics Research
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Journal of Bioinformatics and Computational Biology
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Advances and Applications in Bioinformatics and Chemistry
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Evolutionary Bioinformatics
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Elements of Bioinformatics
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EURASIP Journal on Bioinformatics and Systems Biology
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International Journal of Bioinformatics Research and Applications
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International Journal of Data Mining and Bioinformatics
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IEEE-ACM Transactions on Computational Biology and Bioinformatics
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Network Modeling and Analysis in Health Informatics and Bioinformatics
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Elements of Bioinformatics 2021/22
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Elements of Bioinformatics 2022/23
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Elements of Bioinformatics 24-25
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Elements of Bioinformatics 2023/24
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International Journal of Bioscience, Biochemistry and Bioinformatics
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Bioinformatics Visualization
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IEEE Bioinformatics and Bioengineering
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Workshop on Algorithms in Bioinformatics
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Asia-Pacific Bioinformatics Conference
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IEEE Computational Systems Bioinformatics Conference
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International Journal of Computational Bioinformatics and In Silico Modeling
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Gene set enrichment for reproducible science: comparison of CERNO and eight other algorithms
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BatchI: Batch effect Identification in high-throughput screening data using a dynamic programming algorithm
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Performance of protein-structure predictions with the physics-based UNRES force field in CASP11
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UNRES-Dock—protein–protein and peptide–protein docking by coarse-grained replica-exchange MD simulations
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AQUA-DUCT 1.0: structural and functional analysis of macromolecules from an intramolecular voids perspective
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AQUA-DUCT: a ligands tracking tool
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CAVER Analyst 1.0: graphic tool for interactive visualization and analysis of tunnels and channels in protein structures
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Molywood: streamlining the design and rendering of molecular movies
PublicationMotivation High-quality dynamic visuals are needed at all levels of science communication, from the conference hall to the classroom. As scientific journals embrace new article formats, many key concepts – particularly in structural biology – are also more easily conveyed as videos than still frames. Notwithstanding, the design and rendering of a complex molecular movie remain an arduous task. Here, we introduce Molywood, a robust...
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UNRES-GPU for Physics-Based Coarse-Grained Simulations of Protein Systems at Biological Time- and Size-Scales
PublicationThe dynamics of the virus like particles (VLPs) corresponding to the GII.4 Houston, GII.2 SMV, and GI.1 Norwalk strains of human noroviruses (HuNoV) that cause gastroenteritis was investigated by means of long-time (about 30 μs in the laboratory timescale) molecular dynamics simulations with the coarse-grained UNRES force field. The main motion of VLP units turned out to be the bending at the junction between the P1 subdomain (that...
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IEEE Symposium on Computational Intelligence in Bioinformatics and Computational Biology
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International Conference on Practical Applications of Computational Biology & Bioinformatics
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Ranking metrics in gene set enrichment analysis: do they matter?
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Adaptive filtering of microarray gene expression data based on Gaussian mixture decomposition
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