Jacek Czub - Publications - Bridge of Knowledge

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  • A first-principles study of electron attachment to the fully hydrated bromonucleobases
    Publication

    - CHEMICAL PHYSICS LETTERS - Year 2014

    Degradation mechanism of four brominated nucleobases (BrX), potential DNA radiosensitizers, is studied in explicit water solution, using ab initio molecular dynamics. Several fs long dynamics is needed to localize an electron on the nucleobase. Produced by electron attachment BrX anion radical degrades through the bromide anion abstraction, barrier-free (purines) or with low barrier (pyrimidines), to a reactive nucleobase radical....

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  • Molecular Recognition in Complexes of TRF Proteins with Telomeric DNA
    Publication

    - PLOS ONE - Year 2014

    Telomeres are specialized nucleoprotein assemblies that protect the ends of linear chromosomes. In humans and many other species, telomeres consist of tandem TTAGGG repeats bound by a protein complex known as shelterin that remodels telomeric DNA into a protective loop structure and regulates telomere homeostasis. Shelterin recognizes telomeric repeats through its two major components known as Telomere Repeat-Binding Factors, TRF1...

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