Publikacje
Filtry
wszystkich: 500
Katalog Publikacji
Rok 2020
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Modeling of wood frame structures with different insulation materials under damaging dynamic loading
PublikacjaWood frame buildings are very popular in regions that are exposed to different dynamic excitations, such as damaging earthquakes. Their seismic resistance is really important in order to prevent structural damages and human losses. This paper presents the results of advanced numerical investigation carried out using the FEM. Based on the models of wall panels, the numerical model of real structure of the wood frame building has...
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Modelling of heat and mass transfer through wooden buildings
PublikacjaThe aim of this review paper is to examine the most recent available studies dealing with theoretical, numerical and experimental aspects related to modelling of heat and mass transfer through wooden buildings. The main thermophysical, mechanical and hygrometric properties of wood are firstly discussed. Then, the basic governing equations of heat and mass transfer phenomena are presented. A detailed description of the physical...
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Near Field Coupled Wireless Microwave Sensor
PublikacjaThis paper presents a wireless planar microwave sensor operating at industrial scientific and medical (ISM) frequency for the detection of dielectric materials. The microwave sensor consists of a reader (ground defected microstrip coupled line) and a passive tag where a complementary split-ring resonator (CSRR) is made on the commercially available copper-foil. The CSRR is a peel-off type tag that is excited using the near field...
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Nonlinear numerical simulation of earthquake-induced pounding between timber frame buildings
PublikacjaEarthquakes may induce serious dynamic loads acting on buildings, which can lead to damage or even destruction of the whole structure. In densely populated areas, it is quite common that buildings are located very close one to another which can result in pounding between them during ground motions. Due to the environmental awareness, multi-story timber frame buildings are gaining popularity and therefore there is a need to investigate...
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Novel MNZ-type microwave sensor for testing magnetodielectric materials
PublikacjaA novel microwave sensor with the mu-near-zero (MNZ) property is proposed for testing magnetodielectric material at 4.5 GHz. The sensor has a double-layer design consisting of a microstrip line and a metal strip with vias on layers 1 and 2, respectively. The proposed sensor can detect a unit change in relative permittivity and relative permeability with a difference in the operating frequency of 45 MHz and 78 MHz, respectively....
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Numerical investigation on behaviour of cylindrical steel tanks during mining tremors and moderate earthquakes
PublikacjaCylindrical steel tanks are important components of industrial facilities. Their safety becomes a crucial issue since any failure may cause catastrophic consequences. The aim of the paper is to show the results of comprehensive FEM numerical investigation focused on the response of cylindrical steel tanks under mining tremors and moderate earthquakes. The effects of different levels of liquid filling, the influence of non-uniform...
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Photosensitive and pH-dependent activity of pyrazine-functionalized carbazole derivative as promising antifungal and imaging agent
PublikacjaCarbazole skeleton plays a significant role as a structural scaffold of many pharmacologically active compounds. Pyrazine-functionalized carbazole derivative was constructed by coupling 2-amino-5-bromo-3-methylaminepyrazine (ABMAP) into 3 and 6 positions of the carbazole ring. Multi-experimental methods were used, e.g., potentiometric, spectroscopic (ATR, UV, XRD powder,1H and13C NMR), electrochemical (cyclic voltammetry), and...
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Probabilistic seismic assessment of RC box-girder highway bridges with unequal-height piers subjected to earthquake-induced pounding
PublikacjaThis paper uses the probabilistic seismic assessment to study the effects of pounding and irregularity on the seismic behavior of typical concrete box-girder bridges with four levels of altitudinal irregularity. To extend the results for all bridges in the same class, uncertainty related to the earthquake, structural geometries, and materials are considered. Pounding is likely to take place in two cases: the first one concerns...
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Residue-Pole Methods for Variability Analysis of S-parameters of Microwave Devices with 3D FEM and Mesh Deformation
PublikacjaThis paper presents a new approach for variability analysis of microwave devices with a high dimension of uncertain parameters. The proposed technique is based on modeling an approximation of system by its poles and residues using several modeling methods, including ordinary kriging, Adaptive Polynomial Chaos (APCE), and Support Vector Machine Regression (SVM). The computational cost is compared with the traditional Monte-Carlo...
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Response of cylindrical steel tank under stochastically generated non-uniform earthquake excitation
PublikacjaCylindrical steel tanks are very important structures in industrial facilities since their application is related to storing different types of products. Their safety and reliability have become a crucial issue because any damage may cause significant consequences, including ecological disaster. The most dangerous dynamic load acting on cylindrical steel tanks is related to earthquakes, especially that the seismic excitation may...
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Step on It Bringing Fullwave Finite-Element Microwave Filter Design up to Speed
PublikacjaThere are many steps in the design of a microwave filter: mathematically describing the filter characteristics, representing the circuit as a network of lumped elements or as a coupling matrix, implementing the distributed elements, finding the initial dimensions of the physical structure, and carrying out numerical tuning using electromagnetic (EM) simulators. The whole process is painstaking and time-consuming, and it requires...
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Study on Methods to Control Interstory Deflections
PublikacjaOne of the possibilities to prevent building pounding between two adjacent structures is to consider appropriate in-between separation distance. Another approach might be focused on controlling the relative displacements during seismic excitations. Although the majority of building codes around the world recommend the use of some equations of various distances between structures to avoid pounding; a lot of reports after earthquakes...
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Study on Polymer Elements for Mitigation of Earthquake-Induced Pounding Between Buildings in Complex Arrangements
PublikacjaPounding between neighboring structures during seismic events has been revealed as one of the most commonly observed reasons for severe damage or even total collapse of the adjacent buildings. Therefore, pounding effects have recently become an issue of great interest of many numerical and experimental investigations in many earthquake-prone regions of the world. It has also been observed that the differences in dynamic characteristics...
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Utilizing Genome-Wide mRNA Profiling to Identify the Cytotoxic Chemotherapeutic Mechanism of Triazoloacridone C-1305 as Direct Microtubule Stabilization
PublikacjaRational drug design and in vitro pharmacology profiling constitute the gold standard in drug development pipelines. Problems arise, however, because this process is often dicult due to limited information regarding the complete identification of a molecule’s biological activities. The increasing aordability of genome-wide next-generation technologies now provides an excellent opportunity to understand a compound’s diverse eects...
Rok 2019
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An Enhanced Reduced Basis Method for Wideband Finite Element Method Simulations
PublikacjaIn this paper, we present a novel strategy for selecting expansion points in the reduced basis method. A single computation of the error estimator is used to select a few expansion points in the multi-parameter space simultaneously. The number of selected points is determined adaptively, based on the accuracy of the current reduced model. The reliability and efficiency of this proposed approach are illustrated by numerical tests...
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Comparison of Compact Reduced Basis Method with Different Model Order Reduction Techniques
PublikacjaDifferent strategies suitable to compare the performance of different model order reduction techniques for fast frequency sweep in finite element analysis in Electromagnetics are proposed and studied in this work. A Frobenius norm error measure is used to describe how good job a reduced-order model is doing with respect to the true system response. In addition, the transfer function correct behavior is monitored by studying the...
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Compressed Projection Bases for Model-Order Reduction of Multiport Microwave Components Using FEM
PublikacjaThis paper presents a projection basis compression technique for generating compact reduced-order models (ROM) in the FE analysis of microwave devices. In this approach redundancy is removed from the projection basis by means of the proper orthogonal decomposition technique applied to the projected system of linear equations. Compression allows for keeping the size of a reduced-order model as small as possible without compromising...
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Design of Microwave-Based Angular Displacement Sensor
PublikacjaThis letter presents a novel microwave-based rotation sensor having a wide dynamic range to detect and measure the angular displacement in terms of the change in resonant frequency. The proposed sensor is based on the microstrip technology, where a rotor comprised of a complementary splitring resonator (CSRR) placed on the ground plane of the microstrip line is free to rotate around its axis. The mechanical rotation of CSRR determines...
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Determination of Peak Impact Force for Buildings Exposed to Structural Pounding during Earthquakes
PublikacjaStructural pounding between adjacent, insufficiently separated buildings, or bridge segments, has been repeatedly observed during seismic excitations. Such earthquake-induced collisions may cause severe structural damage or even lead to the collapse of colliding structures. The aim of the present paper was to show the results of the study focused on determination of peak impact forces during collisions between buildings exposed...
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Earthquake-Induced Pounding of Medium-to-High-Rise Base-Isolated Buildings
PublikacjaDuring earthquakes, out-of-phase vibrations in adjacent buildings with limited distance may cause pounding between them. In recent years, the use of seismic isolation has expanded considerably as an effective approach to reduce seismic damage. However, the isolated building experiences large displacements during earthquakes, and there is a possibility of collisions with adjacent structures. The research on earthquake-induced pounding...
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Effective Formula for Impact Damping Ratio for Simulation of Earthquake-induced Structural Pounding
PublikacjaStructural pounding during earthquakes may cause substantial damage to colliding structures. The phenomenon is numerically studied using different models of collisions. The aim of the present paper is to propose an effective formula for the impact damping ratio, as a parameter of the impact force model used to study different problems of structural pounding under seismic excitations. Its accuracy has been verified by four various...
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Experimental Study on Dynamics of Wooden House Wall Panels with Different Thermal Isolation
PublikacjaWood frame buildings are very popular in regions that are exposed to different dynamic excitations including earthquakes. Therefore, their seismic resistance is really important in order to prevent structural damages and human losses. The aim of the present paper is to show the results of experimental tests focused on the dynamic response of wall panels of a wooden frame building with thermal isolation made of mineral wool and...
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Experimental study on models of cylindrical steel tanks under mining tremors and moderate earthquakes
PublikacjaThe aim of the study is to show the results of complex shaking table experimental investigation focused on the response of two models of cylindrical steel tanks under mining tremors and moderate earthquakes, including the aspects of diagnosis of structural damage. Firstly, the impact and the sweep-sine tests have been carried out, so as to determine the dynamic properties of models filled with different levels of liquid. Then,...
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Increasing the Seismic Resistance of Wood-frame Buildings by Applying PU Foam as Thermal Insulation
PublikacjaWood-frame buildings are very common in regions that are exposed to earthquakes. Most of residential buildings are constructed using this technology; therefore, the seismic resistance of them is really essential in order to prevent human losses and structural damage. The aim of the present article is to show the results of the detailed numerical FEM analysis focused on the seismic behaviour of the wood-frame house with different...
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Influence of soil–structure interaction on seismic pounding between steel frame buildings considering the effect of infill panels
PublikacjaThe present research aims to study the influence of the soil-structure interaction (SSI) and existence or absence of masonry infill panels in steel frame structures on the earthquake-induced pounding-involved response of adjacent buildings. The study was further extended to compare the pounding-involved behavior versus the independent behavior of structures without collisions, focusing much on dynamic behavior of single frames....
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Letter to the Editor: Discussion on the Paper “State-of-the-Art of Research on Seismic Pounding Between Buildings with Aligned Slabs”
PublikacjaThe paper “State-of-the-art of research on seismic pounding between buildings with aligned slabs” (by Kharazian and López-Almansa) has recently been published in the journal of Archives of Computational Methods in Engineering. It can be considered as a kind of continuation of previous ‘state-of-the-art’ publications, including two papers and a book. Unfortunately, the paper contains a number of misleading or wrong statements as...
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Non-Linear Analysis of Inter-Story Pounding between Wood-Framed Buildings during Ground Motion
PublikacjaPounding between adjacent buildings during ground motion may result in structural damage or lead to total destruction of structures. The research on the phenomenon has recently been much advanced; however, the analyses have been carried out only for concrete, steel, and masonry structures, while pounding between wooden buildings has not been studied so far. The aim of this paper is to show the results of detailed non-linear seismic...
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Planar Microwave Bragg Reflector Resonant Dielectric Sensor
PublikacjaIn this paper, a periodic structure is used to design a microwave Bragg reflector with the help of hexagonal lattice, which provides a 5 GHz wide stopband between the low-pass band with cut-off frequency 2.6 GHz and the bandpass response with start and stop frequency 7.8 GHz and 10.5 GHz, respectively. A defect in lattice allows passing a narrowband signal at 6 GHz which is found, from the dispersion relation, to be in the region...
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Regularized Local Multivariate Reduced-Order Models With Nonaffine Parameter Dependence
PublikacjaThis paper addresses a singular problem, not yet discussed in the literature, which occurs when parametric reduced-order models are created using a subspace projection approach with multiple concatenated projection bases. We show that this technique may lead to the appearance of localized artifacts in the frequency characteristics of a system, even when the reduced-order projection basis is rich enough to describe the original...
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Seismic Response of High-Rise Buildings Equipped with Base Isolation and Non-Traditional Tuned Mass Dampers
PublikacjaOne of the methods in structural control is the application of combinational control systems in order to reduce the response of structures during earthquakes. The aim of the present paper is to verify the effectiveness of a hybrid control strategy, combining base isolation and non-traditional tuned mass dampers (TMDs) (i.e., TMDs with dashpots directly connected to the ground) in suppressing structural vibrations of high-rise buildings....
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Structural, functional, and stability change predictions in human telomerase upon specific point mutations,
PublikacjaOverexpression of telomerase is one of the hallmarks of human cancer. Telomerase is important for maintaining the integrity of the ends of chromosomes, which are called telomeres. A growing number of human disease syndromes are associated with organ failure caused by mutations in telomerase (hTERT or hTR). Mutations in telomerase lead to telomere shortening by decreasing the stability of the telomerase complex, reducing its accumulation,...
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The Idea of Using Bayesian Networks in Forecasting Impact of Traffic-Induced Vibrations Transmitted through the Ground on Residential Buildings
PublikacjaTraffic–induced vibrations may constitute a considerable load to buildings. In this paper, vibrations transmitted through the ground caused by wheeled vehicles are considered. This phenomenon may cause cracking of plaster, cracks in load-bearing elements or even, in extreme cases, collapse of the whole structure. Measurements of vibrations of real structures are costly and laborious. Therefore, the aim of the present paper is to...
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Verification of Formulas for Periods of Adjacent Buildings Used to Assess Minimum Separation Gap Preventing Structural Pounding during Earthquakes
PublikacjaInsufficient separation distance between adjacent buildings may lead to serious damages during earthquakes due to structural pounding. The best way to prevent collisions is to provide sufficiently large separation distance between the structures. In this paper, the periods of two closely-spaced linear and nonlinear buildings have been investigated so as to accurately assess the minimum in-between separation gap. A new equation...
Rok 2018
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A Compact Basis for Reliable Fast Frequency Sweep via the Reduced-Basis Method
PublikacjaA reliable reduced-order model (ROM) for fast frequency sweep in time-harmonic Maxwell’s equations by means of the reduced-basis method is detailed. Taking frequency as a parameter, the electromagnetic field in microwave circuits does not arbitrarily vary as frequency changes, but evolves on a very low-dimensional manifold. Approximating this low-dimensional manifold by a low dimension subspace, namely, reduced-basis space, gives...
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A GPU Solver for Sparse Generalized Eigenvalue Problems with Symmetric Complex-Valued Matrices Obtained Using Higher-Order FEM
PublikacjaThe paper discusses a fast implementation of the stabilized locally optimal block preconditioned conjugate gradient (sLOBPCG) method, using a hierarchical multilevel preconditioner to solve nonHermitian sparse generalized eigenvalue problems with large symmetric complex-valued matrices obtained using the higher-order finite-element method (FEM), applied to the analysis of a microwave resonator. The resonant frequencies of the low-order...
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A Stabilized Complex LOBPCG Eigensolver for the Analysis of Moderately Lossy EM Structures
PublikacjaThis letter proposes a stabilized locally optimal block preconditioned conjugate gradient method for computing selected eigenvalues for complex symmetric generalized non-Hermitian eigenproblems. Effectiveness of the presented approach is demonstrated for a moderately lossy dual-mode dielectric resonator, modeled using finite-element method with higher order elements
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Advanced Hysteretic Model of a Prototype Seismic Isolation System Made of Polymeric Bearings
PublikacjaThe present paper reports the results of acomprehensive study designed to verify the effectiveness of an advanced mathematical model in simulating the complex mechanical behaviour of a prototype seismic isolation system made of polymeric bearings (PBs). Firstly, in order to construct the seismic bearings considered in this research, a specially prepared flexible polymeric material with increased damping properties was employed....
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Analysis of temporary steel grandstand with different bracing systems exposed to crowd load
PublikacjaGrandstands are structures which are regularly subjected to dynamic loads generated by crowd motions. It is a dangerous situation when spectators induce rhythmic jumping, dancing, stamping, etc. If the synchronized movement of spectators excites a natural frequency of the structure, resonant response might occur. To avoid such situations, temporary steel grandstands are commonly strengthened using additional elements that create...
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Application of Support Vector Machine for Determination of Impact of Traffic-Induced Vibrations on Buildings
PublikacjaThe aim of the article is to present an algorithm of Support Vector Machine created to forecast the impact of traffic-induced vibrations on residential buildings. The method is designed to classify the object into one of two classes. The classification into the first class means that there is no impact of vibrations on the building, while classification to the second class indicates the possible influence and suggests the execution...
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Automatic Reduction-Order Selection for Finite-Element Macromodels
PublikacjaAn automatic reduction-order selection algorithm for macromodels in finite-element analysis is presented. The algorithm is based on a goal-oriented a posteriori error estimator that operates on low-order reduced blocks of matrices, and hence, it can be evaluated extremely quickly.
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Block Conjugate Gradient Method with Multilevel Preconditioning and GPU Acceleration for FEM Problems in Electromagnetics
PublikacjaIn this paper a GPU-accelerated block conjugate gradient solver with multilevel preconditioning is presented for solving large system of sparse equations with multiple right hand-sides (RHSs) which arise in the finite-element analysis of electromagnetic problems. We demonstrate that blocking reduces the time to solution significantly and allows for better utilization of the computing power of GPUs, especially when the system matrix...
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Cell Density-Dependent Cytological Stage Profile and Its Application for a Screen of Cytostatic Agents Active Toward Leukemic Stem Cells
PublikacjaProliferation and expansion of leukemia is driven by leukemic stem cells (LSCs). Multidrug resistance (MDR) of LSCs is one of the main reasons of failure and relapses in acute myeloid leukemia (AML) treatment. In this study, we show that maintaining HL-60 at low cell culture density or applying a 240-day treatment with anthrapyridazone (BS-121) increased the percentage of primitive cells, which include LSCs determining the overall...
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Comparative analysis of different numerical models of a steel radial gate
PublikacjaHydrotechnical structures are important components in water management system and general flooding safety. Their reliability should be ensured since potential damage might lead to catastrophic consequences. Weir gates are considered to be highly vulnerable elements of each hydro power plant, with regard to its dynamic resistance. The aim of the paper is to compare different numerical models and their influence on the results of...
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Experimental study of the effect of vertical acceleration component on the slope stability
PublikacjaThe paper deals with the stability of earth dams subjected to seismic and paraseismic excitations occurring in the close distance to the dam. The Newmark’s stability approach, classified as a simplified dynamic method, has been extended for two directional dynamic loading case and the evolution of the friction coefficient. The paper is focused on the experimental verification of the proposed method for harmonic and cyclic excitations...
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Extracting functional groups of ALLINI to design derivatives of FDA‐approved drugs: Inhibition of HIV‐1 integrase
PublikacjaHIV‐1 integrase (IN) is crucial for integration of viral DNA into the host genome and a promising target in development of antiretroviral inhibitors. In this work, six new compounds were designed by linking the structures of two different class of HIV‐1 IN inhibitors (active site binders and allosteric IN inhibitors (ALLINIs)). Among newly designed compounds, INRAT10b was found most potent HIV‐1 IN inhibitor considering different...
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Future of medicine: personalized oncology
PublikacjaUnderstanding genetic and epigenetic mechanisms of tumorigenesis allows identifying many vital mutations affected the formation of various malignancies. This led to the discovery of a new therapeutic approach, based on molecular mechanisms in the world of medicine, which is called personalized medicine (PM). This review aims to outline the state of the art of the personalized medicine in treatment, taking into account anti-cancer...
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Modal analysis of a fish-belly flap type of steel water gate
PublikacjaABSTRACT: The results of a modal analysis of the fish-belly flap type of steel water gate are presented in the paper. The analysis was conducted for a detailed numerical model of the structure using four-node quadrilateral shell elements. The study was focused on the examination of the influence of positioning of the flap gate and hydrostatic pressure of water on the eigenvalues and eigenmodes of the structure. The results of the study...
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Modal analysis of temporary steel grandstand equipped with different bracing systems
PublikacjaThe aim of this paper is to present the results of numerical analysis focused on temporary steel scaffolding grandstand. The investigation has been devoted to modal analysis where modes of free vibrations and corresponding natural frequencies have been estimated and compared. The structure was equipped with different types of stiffener members. One on them is a typical tubular stiffener, while the second one is spe-cially designed...
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Numerical investigation on dynamic performance of a multi-storey steel structure model and comparison with experimental results
PublikacjaShaking table testing is the most commonly adopted method to simulate earthquake forces. This approach allows us to analyze the dynamic performance and provides a valuable insight into the dynamics of building structures, which helps to improve their future safety and reliability. The present study aims to conduct a numerical evaluation of dynamic response of a multi-storey steel structure model, which was previously examined during...
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Numerical Investigation on Dynamic Performance of a Multi-storey Steel Structure Model and Comparison with Experimental Results
PublikacjaShaking table testing is the most commonly adopted method to simulate earthquake forces. This approach allows us to analyze the dynamic performance and provides a valuable insight into the dynamics of building structures, which helps to improve their future safety and reliability. The present study aims to conduct a numerical evaluation of dynamic response of a multi-storey steel structure model, which was previously examined during...
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Parametrized Local Reduced-Order Models With Compressed Projection Basis for Fast Parameter-Dependent Finite-Element Analysis
PublikacjaThis paper proposes an automated parametric local model-order reduction scheme for the expedited design of microwave devices using the full-wave finite-element method (FEM). The approach proposed here results in parameterized reduced-order models (ROMs) that account for the geometry and material variation in the selected subregion of the structure. In each subregion, a parameter-dependent projection basis is generated by concatenating...
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Polymeric Bearings as a new base isolation system suitable for mitigating machine-induced vibrations
PublikacjaThe present paper summarizes the preliminary results of the experimental shaking table investigation conducted in order to verify the effectiveness of a new base isolation system consisting of Polymeric Bearings in reducing strong horizontal machine-induced vibrations. Polymeric Bearing considered in the present study is a prototype base isolation system, which was constructed with the use of a specially prepared flexible polymer...
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Preconditioners with Low Memory Requirements for Higher-Order Finite-Element Method Applied to Solving Maxwell’s Equations on Multicore CPUs and GPUs
PublikacjaThis paper discusses two fast implementations of the conjugate gradient iterative method using a hierarchical multilevel preconditioner to solve the complex-valued, sparse systems obtained using the higher order finite-element method applied to the solution of the time-harmonic Maxwell equations. In the first implementation, denoted PCG-V, a classical V-cycle is applied and the system of equations on the lowest level is solved...
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Reliable Greedy Multipoint Model-Order Reduction Techniques for Finite-Element Analysis
PublikacjaA new greedy multipoint model-order reduction algorithm for fast frequency-domain finite-element method simulations of electromagnetic problems is proposed. The location of the expansion points and the size of the projection basis are determined based on a rigorous error estimator. Compared to previous multipoint methods, the quality of the error estimator is significantly improved by ensuring the orthogonality of the projection...
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Single and Dual-GPU Generalized Sparse Eigenvalue Solvers for Finding a Few Low-Order Resonances of a Microwave Cavity Using the Finite-Element Method
PublikacjaThis paper presents two fast generalized eigenvalue solvers for sparse symmetric matrices that arise when electromagnetic cavity resonances are investigated using the higher-order finite element method (FEM). To find a few loworder resonances, the locally optimal block preconditioned conjugate gradient (LOBPCG) algorithm with null-space deflation is applied. The computations are expedited by using one or two graphical processing...
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Structural and dynamic insights on the EmrE protein with TPP+ and related substrates through molecular dynamics simulations
PublikacjaEmrE is a bacterial transporter protein that forms an anti-parallel homodimer with four transmembrane helices in each monomer. EmrE transports positively charged aromatic compounds, such as TPP+ and its derivatives. We performed molecular dynamics (MD) simulations of EmrE in complex with TPP+, MeTPP+, and MBTPP+ embedded in a membrane. The detailed molecular properties and interactions were analysed for all EmrE-ligand complexes....
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Study on 19th-century cast iron columns from the former financial office building in Kwidzyn
PublikacjaThe article presents the results for cast iron columns used as floor supports in the former financial office building in Kwidzyn (Poland).The stocktaking drawings provided the general and detailed data about the 19th century designer’s decisions. During the research, architectural and structural analysis was carried out. The graphics were used as a starting material for preparing 3D calculation models. The FEM-based numerical simulations...
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The effectiveness of polymer adhesive in reduction of vibrations of structural members
PublikacjaIn this paper, the idea of using polymer adhesive as a damping layer is proposed. An experimental study of two aluminium cantilevered beams has been conducted. One of them presents a plain cantilevered beam, while the second one considers two aluminium beams bonded with a polymer adhesive of different thickness (0,5; 1,2; 1,75; 3,1 and 5 mm). The polymer adhesive considered in the study is a specially designed flexible...
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The structurally similar TRFH domain of TRF1 and TRF2 dimers shows distinct behaviour towards TIN2
PublikacjaThe telomere repeat binding-factor 1 and 2 (TRF1 and TRF2) proteins of the shelterin complex bind to duplex telomeric DNA as homodimers, and the homodimerization is mediated by their TRFH (TRF-homology) domains. We performed molecular dynamic (MD) simulations of the dimer forms of TRF1TRFH and TRF2TRFH in the presence/absence of the TIN2TBM (TIN2, TRF-interacting nuclear protein 2, TBM, TRF-binding motif) peptide. The MD results...
Rok 2017
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Communication and Load Balancing Optimization for Finite Element Electromagnetic Simulations Using Multi-GPU Workstation
PublikacjaThis paper considers a method for accelerating finite-element simulations of electromagnetic problems on a workstation using graphics processing units (GPUs). The focus is on finite-element formulations using higher order elements and tetrahedral meshes that lead to sparse matrices too large to be dealt with on a typical workstation using direct methods. We discuss the problem of rapid matrix generation and assembly, as well as...
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Comparing the Effectiveness of ANNs and SVMs in Forecasting the Impact of Traffic-Induced Vibrations on Building
PublikacjaTraffic - induced vibrations may cause damage to structural elements and may even lead to structural collapse. The aim of the article is to compare the effectiveness of algorithms in forecasting the impact of vibrations on buildings using the Machine Learning (ML) methods. The paper presents two alternative approaches by using Artificial Neural Networks (ANNs) and Support Vector Machines (SVMs). Factors that may affect traffic-induced...
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Damage-Involved Structural Pounding in Bridges under Seismic Excitation
PublikacjaDuring severe earthquakes, pounding between adjacent superstructure segments of highway elevated bridges was often observed. It is usually caused by the seismic wave propagation effect and may lead to significant damage. The aim of the present paper is to show the results of the numerical analysis focused on damage-involved pounding between neighbouring decks of an elevated bridge under seismic excitation. The analysis was carried...
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Experimental and numerical analysis of an aluminum cantilevered beam with polymer adhesive
PublikacjaIn this paper, experimental and numerical investigation on a composite cantilevered aluminum beam has been conducted. The subject of the study consists of two plain aluminum elements bonded with polymer adhesive of different thickness. It has been proven in the previous study that this kind of material has high damping properties. During an experimental investigation, value of damping ratios have been obtained. The aim of a numerical...
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Experimental Study on Effectiveness of a Prototype Seismic Isolation System Made of Polymeric Bearings
PublikacjaSeismic isolation is identified as one of the most popular and effective methods of protecting structures under strong dynamic excitations. Base isolators, such as Lead Rubber Bearings, High Damping Rubber Bearings, and Friction Pendulum Bearings, are widely used in practice in many earthquake-prone regions of the world to mitigate structural vibrations, and therefore minimize loss of life and property damage during seismic events....
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GPU-Accelerated 3D Mesh Deformation for Optimization Based on the Finite Element Method
PublikacjaThis paper discusses a strategy for speeding up the mesh deformation process in the design-byoptimization of high-frequency components involving electromagnetic field simulations using the 3D finite element method (FEM). The mesh deformation is assumed to be described by a linear elasticity model of a rigid body; therefore, each time the shape of the device is changed, an auxiliary elasticity finite-element problem must be solved....
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GPU-Accelerated LOBPCG Method with Inexact Null-Space Filtering for Solving Generalized Eigenvalue Problems in Computational Electromagnetics Analysis with Higher-Order FEM
PublikacjaThis paper presents a GPU-accelerated implementation of the Locally Optimal Block Preconditioned Conjugate Gradient (LOBPCG) method with an inexact nullspace filtering approach to find eigenvalues in electromagnetics analysis with higherorder FEM. The performance of the proposed approach is verified using the Kepler (Tesla K40c) graphics accelerator, and is compared to the performance of the implementation based on functions from...
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Investigation of behaviour of metal structures with polymer dampers under dynamic loads
PublikacjaA large number of accidents concerning structures subjected to dynamic loads have been recently observed. One of the examples of such a structure is a temporary steel grandstand erected using scaffolding system. Dynamic load that is generated by crowd movement has a significant influence on the behaviour of the structure and may lead to excessive structural vibrations. The aim of the study is to consider the idea of using polymer...
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Local Mesh Deformation for accelerated parametric studies based on the Finite Element Method
PublikacjaThis paper presents an approach for enhancing the efficiency of two-dimensional Finite Element Method analysis in parametric studies or optimisation process of microwave components. The new approach involves local mesh deformation applied near the elements that are modified during computations. Since in the proposed approach the topology of the mesh remains unchanged, a new mesh does not have to be generated from scratch when the...
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Local mesh morphing technique for parametrized macromodels in the finite element method
PublikacjaThis paper presents a novel approach for enhancing the efficiency of the design process of microwave devices by means of the finite element method. It combines mesh morphing with local model order reduction (MOR) and yields parametrized macromodels that can be used to significantly reduce the number of variables in the FEM system of equations and acceleration of computer simulation. A projection basis for local reduction is generated...
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MATCHED FILTER APPROACH FOR MICROSEISMIC SIGNAL PROCESSING OF REAL DATA FROM EAST POMERANIA SHALE GAS
PublikacjaThe microseismic monitoring is a method of monitoring of fracture propagation during hydraulic fracturing (HF)process. An array of several hundred geophones is placed on the surface to record little ground tremors induced by fracturing process. Filtration and summation of signals from geophones is essential to identify and locate fracturing events from underground. Authors propose a method of matched filtering, that is usually...
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MICROSEISMIC EVENT DETECTION USING DIFFERENT ALGORITHMS ON REAL DATA FROM PATCH ARRAY GEOPHONE GRID FROM EASTERN POMERANIA FRACTURING JOB
PublikacjaThe microseismic monitoring is a method of monitoring of fracture propagation during hydraulic fracturing process. Hydraulic fracturing is a method of reservoir stimulation used especially for unconventional gas recovery. A matrix of several thousand geophones is placed on the surface of earth to record every little tremor of ground induced by fracturing process. Afterwards, the signal is analysed and the place of tremor occurrence...
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Microseismic Monitoring of Hydraulic Fracturing - Data Interpretation Methodology With an Example from Pomerania
PublikacjaMicroseismic monitoring is a method for localizing fractures induced by hydraulic fracturing in search for shell gas. The data is collected from an array of geophones deployed on the surface or underground. Ground vibrations are recorded and analysed for fracture location, magnitude and breakage mechanism. For successful microseismic monitoring one need a velocity model of underlying formations. The model is further tuned with...
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Modal Analysis of a Steel Radial Gate Exposed to Different Water Levels
PublikacjaWith the increase in water retention needs and planned river regulation, it might be important to investigate the dynamic resistance of vulnerable elements of hydroelectric power plants, including steel water locks. The most frequent dynamic loads affecting hydroengineering structures in Poland include vibrations caused by heavy road and railway traffic, piling works and mining tremors. More destructive dynamic loads, including...
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Molecular basis and potential activity of HIV-1 reverse transcriptase toward trimethylamine-based compounds
PublikacjaReverse transcriptase (RT) inhibitors are currently used to treat human immunodeficiency virus (HIV)-1 infections. In this work, novel triethylamine derivatives were designed and studied by rigid and flexible docking and molecular dynamics (MD) approaches. An apo form of HIV-1 RT was also studied by MD simulation to analyze comparative response of protein in ligand-bound and ligand-unbound forms. Among newly designed HIV-1 RT inhibitors,...
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Molecular basis and quantitative assessment of TRF1 and TRF2 protein interactions with TIN2 and Apollo peptides
PublikacjaShelterin is a six-protein complex (TRF1, TRF2, POT1, RAP1, TIN2, and TPP1) that also functions in smaller subsets in regulation and protection of human telomeres. Two closely related proteins, TRF1 and TRF2, make high-affinity contact directly with double-stranded telomeric DNA and serve as a molecular platform. Protein TIN2 binds to TRF1 and TRF2 dimer-forming domains, whereas Apollo makes interaction only with TRF2. To elucidate...
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Molecular basis for the DNA damage induction and anticancer activity of asymmetrically substituted anthrapyridazone PDZ-7
Publikacjanthrapyridazones, imino analogues of anthraquinone, constitute a family of compounds with remarkable anti-cancer activity. To date, over 20 derivatives were studied, of which most displayed nanomolar cytotoxicity towards broad spectrum of cancer cells, including breast, prostate and leukemic ones. BS-154, the most potent derivative, had IC50 values close to 1 nM, however, it was toxic in animal studies. Here, we characterize another...
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Numerical Evaluation of Dynamic Response of a Steel Structure Model under Various Seismic Excitations
PublikacjaThe present paper reports the results of the study, which was designed to perform a numerical evaluation of dynamic response of a single-storey steel structure model. The experimental model was previously subjected to a number of different earthquake ground motions during an extensive shaking table investigation. The analyzed structure model was considered as a 1-DOF system with lumped parameters, which were determined by conducting...
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Numerical modal analysis of a vertical rising steel water gate
PublikacjaVertical rising steel water gates are very common not only in Poland and Germany but also in other countries of the world. Their popularity is mainly attributed to their simplicity of construction, which makes their production process cheaper and faster when compared to other solutions. The aim of this paper is to conduct a numerical modal analysis to examine the eigenvalues and eigenmodes of a vertical rising steel gate. Two cases...
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Planning, Configuration and Usefulness of Microseismic Monitoring on Eastern-Europe Platform – Example from East Pomerania
PublikacjaThe microseismic monitoring is a method of monitoring of fracture propagation during hydraulic fracturing process. The method uses array of geophones to localize micro tremors induced by liquid pumped underground at high rate and pressure. The acquired information helps to optimize fracturing process and prevents fracture growth to aquifer levels. It proved to be useful on several unconventional hydrocarbon reservoirs in the USA....
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Powierzchniowe badania mikrosejsmiczne na odwiercie w północnej Polsce, optymalizacja modelu prędkościowego
PublikacjaCelem wykonanych prac było potwierdzenie możliwości wykorzystania mikrosejsmicznego pomiaru powierzchniowego ze schematem rozłożenia typu patch array dla polskich warunków geologicznych. Artykuł zawiera opis przeprowadzonych prac mikrosejsmiki powierzchniowej wykonanych na odwiercie w północnej Polsce wraz z procedurą optymalizacji modelu prędkościowego.
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Preventing of earthquake-induced pounding between steel structures by using polymer elements – experimental study
PublikacjaPounding between two, or more, adjacent buildings during earthquakes has been identified as one of the reasons for substantial damage or even total collapse of colliding structures, so it has been the subject of numerous studies in the recent years. A major reason leading to interactions between adjacent, insufficiently separated structures results from the differences in their dynamic properties. A number of different methods...
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REVERSE MODELLING OF MICROSEISMIC WAVES PROPAGATION FOR THE INTERPRETATION OF THE DATA FROM HYDRAULIC FRACTURING MONITORING IN POLAND
PublikacjaA hydraulic fracturing job was performed to stimulate gas flow from a horizontal wellbore located in Poland. The whole operation was overseen by means of microseismic monitoring. For this purpose, an array of 12000 geophones was deployed on ground in form of patches distributed unevenly in a region of 4km from the wellbore. The array was constantly recording seismic signals during whole fracturing processed. Such recorded signals...
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Seismic pounding behavior of multi-story buildings in series considering the effect of infill panels
PublikacjaThe aim of the present paper is to study the influence of the infill panels on the seismic pounding response of adjacent structures in series. The contribution of the masonry infill has been simulated using equivalent diagonal compression struts. Steel frames have been assumed to have elastic-plastic behavior with 1% linear strain hardening. The dynamic contact analysis has been utilized where contact surface model (target and...
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Study on polymer elements for mitigation of earthquake-induced pounding between buildings in complex arrangements
PublikacjaPounding between neighbouring buildings during earthquakes has been identified as one of the reasons for substantial damage or even total collapse of colliding structures, so it has been the subject of numerous studies in the recent years. A major reason leading to interactions between adjacent, insufficiently separated structures results from the differences in their dynamic properties. The problem is much more complicated for...
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The Processing Procedure for the Interpretation of Microseismic Signal Acquired from a Surface Array During Hydraulic Fracturing in Pomerania Region in Poland
PublikacjaHydraulic fracturing is a procedure of injecting high pressure fluid into the wellbore in order to break shell rock and facilitate gas flow. It is a very costly procedure and, if not conducted properly, it may lead to environmental pollution. To avoid costs associated with pumping fluid outside the perspective (gas rich) zone and improve one’s knowledge about the reservoir rock, microseismic monitoring can be applied. The method...
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Timber Frame Houses with Different Insulation Materials - Seismic Analysis
PublikacjaThe aim of this article is to present results of a dynamic numerical analysis focused on the response of two timber frame building structures exposed to seismic excitations. The first structure was insulated with mineral wool, while the second one with polyurethane foam. Specifications and technology involved in the models' construction are based on the previously conducted experimental study, upon which numerical structural models...
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Zero-Pole Electromagnetic Optimization
PublikacjaA fast technique for the full-wave optimization of transmission or reflection properties of general linear timeinvariant high-frequency components is proposed. The method is based on the zeros and poles of the rational function representing the scattering parameters of the device being designed and it is the generalization of the technique developed for the design by optimization of microwave filters. The performance of the proposed...
Rok 2016
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Akceleracja metody elementów skończonych przy użyciu procesora graficznego
PublikacjaArtykuł przedstawia rezultaty akceleracji obliczeń metody elementów skończonych z użyciem procesora graficznego. Dzięki zastosowaniu masowo zrównoleglonych obliczeń na procesorze graficznym dwóch najbardziej kosztownych obliczeniowo etapów generacji macierzy współczynników i rozwiązywania układu równań przy użyciu metody gradientów sprzężonych z wielopoziomowym prekondycjonerem o schemacie V udało się pięciokrotnie skrócić czas...
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Application of polymer element in reduction of temporary steel grandstand vibrations
PublikacjaThe numerical analysis focused on reduction of vibrations of a temporary steel scaffolding grandstand has been conducted in this paper. These types of structures are regularly subjected to dynamic loads which, in conjunction with light and quite slender structural members, may induce dangerous vibrations. To increase their safety, temporary steel grandstands are usually strengthened with the diagonal stiffeners of tubular cross...
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Behaviour of Asymmetric Structure with Base Isolation Made of Polymeric Bearings
PublikacjaEarthquake-induced ground motions are the most severe and unpredictable threats to the structures all around the world. Seismic excitations cause a lot of damage in a wide variety of ways, leaving thousands of casualties in their wake. Due to randomness of earthquake occurrence, lack of visible causes and their power of destructiveness, structural engineers need to develop new technical solutions and protection systems against...
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Earthquake-Induced Pounding Between Asymmetric Steel Buildings
PublikacjaEarthquake-induced pounding between buildings has been the subject of numerous numerical and experimental studies in the resent years. The phenomenon may cause severe damage to structural elements as well as may also lead to the total collapse of colliding structures. A major reason leading to pounding between adjacent, insufficiently separated buildings results from the differences in their dynamic properties. The aim of this...
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Effect of mesh deformation on the accuracy of 3D FEM electromagnetic analysis
PublikacjaIn this paper, the accuracy of 3D FEM electromagnetic simulations in parametric analysis using mesh deformation techniques is discussed. Mesh deformation techniques allow one to preserve the mesh topology while the geometry is changed. It is shown that the application of mesh deformation can provide accurate simulation results even for very large deformations. On the other hand, it is also shown that the technique has to be used...
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Effectiveness of a mathematical model in simulating nonlinear mechanical behaviour of a seismic isolation system made of polymeric bearings
PublikacjaThe present study was focused on determining the effectives of a nonlinear mathematical model in simulating complex mechanical behaviour of a seismic isolation system made of Polymeric Bearings. The proposed mathematical model defines the lateral force as a nonlinear function of the shear displacement and the deformation velocity. The effectiveness of the proposed mathematical model was verified by comparing the seismic response...
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Experimental and numerical study on polymer element used for reduction of temporary steel grandstand vibrations
PublikacjaThe purpose of the paper is to analyse the effectiveness of a polymer damper in reduction of a temporary steel grandstand vibrations through the experimental and numerical study. The damper considered in the investigation is constructed out of two L-shape steel members bonded with polymer mass of high damping properties. The element has been installed as a diagonal one at the back part of the structure. The method has been compared...
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Fast Full-Wave Multilevel Zero-Pole Optimization of Microwave Filters
PublikacjaA new concept is proposed for the full-wave computer-aided design of microwave filters. The method consists of two stages and operates on the zeros and poles of the transfer function and their derivatives. These quantities are evaluated from the response computed by a full-wave electromagnetic solver with two levels of accuracy. The two stages make use of different models that are optimized using a low-accuracy electromagnetic...
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Geometry Parametric Model Order Reduction with Randomly Generated Projection Bases
PublikacjaIn this work, a reduced-order model for geometry parameters and fast frequency sweep is proposed. The Finite Element Method is used to solve time-harmonic Maxwell’s equations. Taking into account the electromagnetic field does not arbitrarily vary as a function of frequency and geometry parameters, a low dimension system manifold is identified. Thus, the original Finite Element problem can be approximated by a model of reduced...
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GPU-accelerated finite element method
PublikacjaIn this paper the results of the acceleration of computations involved in analysing electromagnetic problems by means of the finite element method (FEM), obtained with graphics processors (GPU), are presented. A 4.7-fold acceleration was achieved thanks to the massive parallelization of the most time-consuming steps of FEM, namely finite-element matrix-generation and the solution of a sparse system of linear equations with the...
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Greedy Multipoint Model-Order Reduction Technique for Fast Computation of Scattering Parameters of Electromagnetic Systems
PublikacjaThis paper attempts to develop a new automated multipoint model-order reduction (MOR) technique, based on matching moments of the system input–output function, which would be suited for fast and accurate computation of scattering parameters for electromagnetic (EM) systems over a wide frequency band. To this end, two questions are addressed. Firstly, the cost of the wideband reduced model generation is optimized by automating a...
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Identification of 1H‐indene‐(1, 3, 5, 6)‐tetrol derivatives as potent pancreatic lipase inhibitors using molecular docking and molecular dynamics approach
PublikacjaPancreatic lipase is a potential therapeutic target to treat diet-induced obesity in humans, as obesity-related diseases continue to be a global problem. Despite intensive research on finding potential inhibitors, very few compounds have been introduced to clinical studies. In this work, new chemical scaffold 1H-indene-(1,3,5,6)-tetrol was proposed using knowledge-based approach, and 36 inhibitors were derived by modifying its...
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Influence of separation gap on the response of colliding models of steel structures under seismic and paraseismic excitations
PublikacjaAs a result of high urbanization, the need to erect closely-spaced buildings forces designers to consider collisions between structures taking place during ground motions. Experimental and numerical studies have confirmed that such collisions (often referred to as structural pounding) may cause serious damage to the structural elements and even lead to total collapse of colliding structures. The main reason of earthquake-induced...