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Search results for: PERSONALIZED ONCOLOGY
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Future of medicine: personalized oncology
PublicationUnderstanding genetic and epigenetic mechanisms of tumorigenesis allows identifying many vital mutations affected the formation of various malignancies. This led to the discovery of a new therapeutic approach, based on molecular mechanisms in the world of medicine, which is called personalized medicine (PM). This review aims to outline the state of the art of the personalized medicine in treatment, taking into account anti-cancer...
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Personalized Medicine
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The Effect of Personalized Ventilation on Work Productivity
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Personalized avatar animation for virtual reality
PublicationThe paper presents a method for creating a personalized animation of avatar for virtual reality application such as multiplayer on-line games. Animation is stored in a simplified version, containing only keyframes for important avatar poses. This version defines key movements, i.e. roughly describes the avatar's action. Animation is enriched by the user with new motion phases utilizing fuzzy descriptors.Various degrees of motion...
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Electroporation in Modern Oncology
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Effect of personalized ventilation on individual employee performance and productivity
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Pharmacogenomics & Personalized Medicine
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Personalized Medicine in Psychiatry
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Ontology clustering by directions algorithm to expand ontology queries
PublicationThis paper concerns formulating ontology queries. It describes existing languages in which ontologies can be queried. It focuses on languages which are intended to be easily understood by users who are willing to retrieve information from ontologies. Such a language can be, for example, a type of controlled natural language (CNL). In this paper a novel algorithm called Ontology Clustering by Directions is presented. The algorithm...
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Ontology Visualization
PublicationOntologie bardzo często są reprezentowane w postaci grafu, którego wierzchołkami są obiekty występujące w prezentowanej ontologii a krawędziami relacje i powiązania pomiędzy tymi obiektami. Grafy reprezentujące ontologie mogą być złożone już dla średniego rozmiaru ontologii. Stąd niezbędna jest pełna i czytelna reprezentacja elementów takiego grafu. Dostępne rozwiązania zazwyczaj nie oferują reprezentacji pełnego zbioru elementów...
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Increasing the Efficiency of Ontology Alignment by Tracking Changes in Ontology Evolution
PublicationIn this paper we present a development of our ontology alignment framework based on varying semantics of attributes. Emphasising the analysis of explicitly given descriptions of how attributes change meanings they entail while being included within different concepts have been proved useful. Moreover, we claim that it is consistent with the intuitive way how people see the real world and how they find similarities and correspondences...
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Recent advances in 3D bioprinted tumor models for personalized medicine
PublicationCancerous tumors are among the most fatal diseases worldwide, claiming nearly 10 million lives in 2020. Due to their complex and dynamic nature, modeling tumors accurately is a challenging task. Current models suffer from inadequate translation between in vitro and in vivo results, primarily due to the isotropic nature of tumors and their microenvironment's relationship. To address these limitations, hydrogel-based 3D bioprinting...
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Postbiotics in oncology: science or science fiction?
PublicationThe gut microbiome has been increasingly understood to play a critical role in carcinogenesis and cancer disease progression. The most recent research advancements have shown that different tools of microbiota manipulation contribute to gut microbiome–immune–oncology axis modulation, offering exciting opportunities for targeted interventions aimed at improving the efficacy of established anti-cancer therapy. Postbiotics are a new...
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Journal of Personalized Medicine
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Current Pharmacogenomics and Personalized Medicine
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Drug Metabolism and Personalized Therapy
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Preoperative Ultrasonographic Assessment of the Anterior Pelvic Plane for Personalized Total Hip Replacement
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Extendable Safety and Security Ontology
PublicationSecurity plays an increasingly important role in our everyday life, and research and users of computer systems point out that the need arises for a common, formalised model capable of integrating different solutions. In this paper we show that an ontology can be designed and created in a way that will make it suitable for interoperability and integration. A security and safety ontology and the methodology for creating a common...
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Contextual ontology for tonality assessment
Publicationclassification tasks. The discussion focuses on two important research hypotheses: (1) whether it is possible to construct such an ontology from a corpus of textual document, and (2) whether it is possible and beneficial to use inferencing from this ontology to support the process of sentiment classification. To support the first hypothesis we present a method of extraction of hierarchy of contexts from a set of textual documents...
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Ontology-Aided Software Engineering
PublicationThis thesis is located between the fields of research on Artificial Intelligence (AI), Knowledge Representation and Reasoning (KRR), Computer-Aided Software Engineering (CASE) and Model Driven Engineering (MDE). The modern offspring of KRR - Description Logic (DL) [Baad03] is considered here as a formalization of the software engineering Methods & Tools. The bridge between the world of formal specification (governed by the mathematics)...
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IT Business Standards as an Ontology Domain
PublicationThe aim of this paper is to report a selection of Semantic Web aspects pertaining to ontology development activities in the domain of the IT business standard (TOGAF 9) such as formulating competency questions, conceptualization of the domain, resolution of the source knowledge deficiency and applying common design patterns in the OWL formalization. Authors also try to determine target groups that may benefit from such ontology...
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Security ontology construction and integration
PublicationThere are many different levels on which we can examine security. Each one is different from others, all of them are dependent on the context. Hence the need to bear additional knowledge enabling efficient utilization of the knowledge by the computers. Such information can be provided by ontologies. The paper presentsgathered requirements needed to be taken into account when creating an ontology. The method of ontology creation...
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Application of Ontology In the ITIL Domain
PublicationBusiness standards tend to be less formal in description then strict technical norms. Authors of this chapter suggest applying ontological description (powered by the capabilities of the OWL language) to express Information Technology Infrastructure Library (ITIL). One of the goals of this initial study is to determine the usefulness of such semantic model in organizations that adopted or plan to adopt ITIL.
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Accurate, robust and harmonized implementation of morpho-functional imaging in treatment planning for personalized radiotherapy
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Sensitivity of personalized ventilation air terminal device geometry with regard to a human thermal sensation
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Ontology oriented threat detection system
PublicationW niniejszym artykule przedstawiony jest projekt opartego o ntologię systemu wykrywania zagrożeń w różnego typu monitorowanych środowiskach (OOTDS). Zakłada się, że umieszczone w środowisku czujniki na bieżąco dostarczają systemowi zdarzeń odzwierciedlających zmiany zachodzące w środowisku. Korzystając z sieci asynchronicznych bloków rosnącej złożoności OOTDS dokonuje analizy otrzymanych zdarzeń. Bloki wstępnego przetwarzania konwertują...
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Ontology as a Tool for the IT Management Standards Support
PublicationIn this paper the authors discuss the initial idea of using ontologies to model requirements of the standards that support IT management processes. The Open Group Architecture Framework (TOGAF) is set as an example. A need for transition from the generic model do the organization-specific one is indicated. The described example serves as a ground for considering the usefulness of such modeling approach in the wider spectrum of...
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Algebra of ontology modules for semantic agents
PublicationW środowisku Sieci Semantycznej problem precyzyjnego manipulowania jednostkami wiedzy nabiera szczególnego znaczenia. W tej publikacji dyskutujemy możliwość zaadaptowania do tego celu elastycznego aparatu algebry relacyjnej. Na bazie dysksji szkicujemy pewną szczególną analogię pomiędzy bazami danych a bazami wiedzy i używamy tej analogii do wprowadzenia algebry modułów semantycznych.
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Hybrid approach to ontology specification and development
PublicationIn this chapter a first draft of a hybrid ontology development approach is presented. The context of this method encompasses the multi-agent system equipped with knowledge bases and inferring engine. The process of ontology engineering appears as a complex issue, as it addresses different point-views of both, a client and a modeler with a requirements/system analyst. Regarding this, an approach based on the knowledge preprocessing...
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Towards Use of OntoClean for Ontology Contextualization
PublicationOntologies are formal systems of concepts used to describe numerous domains of interest. Ontologies are usually very expressive, but it comes at a price of computationally expensive reasoning over them. In our previous work we discussed the possible performance benefits that can be obtained by decomposing an ontology into contexts. While the benefits are appealing, we discovered that, in our case, the main obstacle against using...
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Treatment of chronic pain in oncology: cooperation between the oncologist and psychooncologist
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Attitudes of oncology patients’ towards biospecimen donation for biobank research
PublicationBackground Since the biological material that remains after diagnostic and therapeutic procedures plays crucial role in biobank research, this study aims to explore cancer patients’ views on the donation of biospecimens for research purposes. Methods 548 oncology patients from two hospitals with oncology treatment units in Poznan, Poland,...
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Value of Personalized Dementia-Specific Quality of Life Scales: An Explorative Study in 3 European Countries
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A personalised approach to prostate cancer screening based on genotyping of risk founder alleles
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Influence and selection of basic concepts on ontology design
PublicationOntologies as entities representing individual point of view on surrounding world introduce heterogeneity to knowledge representation. Common set of core concepts can introduce similarity big enough for further interoperability between ontologies. In this paper an experiment is presented proving that despite differences in detail ontologies stay similar in regard of core concepts. During the experiments NOIA methodology enhanced...
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Ontology Engineering Aspects in the Intelligent Systems Development
PublicationThe ontology engineering encompasses both, artificial intelligence methods and software engineering discipline. The paper tries to address a selection of aspects pertaining to development activities such as choice of the environmental framework, functionality description, specification methods and roles definition. Authors refer to the ontology development projects they were involved in.
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Cartometric: semantic ontology evaluation with cartographic methods
PublicationW ostatnich latach, głównie dzięki rozwojowi inicjatywy Sieci Semantycznej (ang. Semantic Web), staliśmy się świadkami powstawania coraz większej liczby gwałtownie ewoluujących ontologii. W takiej sytuacji zarówno użytkownicy Sieci, jak i komputerowe agenty potrzebują metody oceny właściwości ontologii, w szczególności takiej, która uwzględni jej cechy semantyczne, czyli kształt przestrzeni dozwolonych modeli. Niniejsza praca prezentuje...
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Developing an Ontology from Set of Experience KnowledgeStructure
PublicationWhen referring to knowledge forms,collecting for all decision eventsin a knowledge-explicit way becomes a significant ask for any company. Set of experience knowledge structure can assis in accomplishing this purpose.However,after collecting,distributing and sharing that knowledge as adecisional DNA is even a more important advance.Distributing and sharing companies' decisional DNA through an efficient development of Ontologies...
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Ontology management in the multi-agent system for the it evaluation
PublicationThe team of researchers at the Gdańsk University of Technology is currently developing a model of the multi-agent system (MAS_IT) that would aid the IT managers to find the most appropriate technology to the goals assumed. The knowledge is to be provided by experts and stored in the facts and rules bases. The responsibility of the verification process-on the input and query stages-is given to the ontology, making it to some extend...
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OSC - domain oriented ontology creation system
PublicationOntologies are, as part of semantic web, a basic component to enrich content available in the Internet with a meaning understandable for computers. In this publication an architecture and functionality of a domain oriented web portal for collaborative creation and storage of ontologies is presented. The system is being created by Gdańsk University of Technology Electronics, Telecommunications and Informatics faculty's Department...
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Who Is a Pathologist According to Oncology Patients and Internet Users? A Survey Study
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Application of computational intelligence models in IoMT big data for heart disease diagnosis in personalized health care
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Immunoscore, circulating tumor cells and human-derived organoids as potential predictive tools in personalized cancer medicine
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Pharmacomicrobiomics of cell-cycle specific anti-cancer drugs – is it a new perspective for personalized treatment of cancer patients?
PublicationIntestinal bacteria are equipped with an enzyme apparatus that is involved in the active biotrans-formation of xenobiotics, including drugs. Pharmacomicrobiomics, a new area of pharmacology, analyses interactions between bacteria and xenobiotics. However, there is another side to the coin. Pharmacotherapeutic agents can significantly modify the microbiota, which consequently affects their efficacy. In this review, we comprehensively...
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Fluent Editor and Controlled Natural Language in Ontology Development
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Ontology of the Design Pattern Language for Smart Cities Systems
PublicationThe paper presents the definition of the design pattern language of Smart Cities in the form of an ontology. Since the implementation of a Smart City system is difficult, expensive and closely linked with the problems concerning a given city, the knowledge acquired during a single implementation is extremely valuable. The language we defined supports the management of such knowledge as it allows for the expression of a solution...
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The Use of an Ontotrigger for Designing the Ontology of a Model Maturity Capsule
PublicationThe aim of this work is to give the definition and present the possibility of applying (introduced and defined here) ontotriggers to design the ontology of a maturity capsule used in the assessment of IT projects. The complexity of designing ontology processes raises the question of whether there is a need for designing ontologies in a situation where it is possible to map them. The work is divided into four main parts. The first...
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Communications, Multimedia, Ontology, Photonics and Internet Engineering 2012
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Lexicon Based Algorithm for Domain Ontology Merging and Alignment
PublicationMore and more systems contain some kind of knowledge describing their field of operation. Such knowledge in many cases is stored as an ontology. A need arises for ability to quickly match those ontologies to enable interoperability of such systems. The paper presents a lexicon based algorithm for merging and aligning of OWL ontologies. The proposed similarity levels are being presented and the proposed algorithm is being described....
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Ontology of economy as the basis of Peter Koslowsk's ''Ethical economy''
PublicationArtykuł daje prezentacje i komentarz rozdziału o ontologicznych przesłankach teorii ekonomicznych z pracy Petera Koslowskiego ''Zasady etycznej ekonomii (''Princiles''of Ethical Economy, Kluwer Academic Publishers, 2001).