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Search results for: fragment okazaki
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On the time behaviour of Okazaki fragments
PublicationW pracy wyprowadzono wzory na prawdopodobieństwo, że podczas procesu replikacji DNA w chwili t pojawi się n fragmentów Okazaki.
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Bidirectional Fragment to Fragment Links in Wikipedia
PublicationThe paper presents a WikiLinks system that extends the Wikipedia linkage model with bidirectional links between fragments of the articles and overlapping links’ anchors. The proposed model adopts some ideas from the research conducted in a field of nonlinear, computer-aided writing, often called a hypertext. WikiLinks may be considered as a web augmentation tool but it presents a new approach to the problem that addresses the specific...
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A new assay based on terminal restriction fragment length polymorphism of homocitrate synthase gene fragments for Candida species identification
PublicationCandida sp. have been responsible for an increasing number of infections, especially in patients with immunodeficiency. Species specific differentiation of the Candida sp. is difficult in routine diagnosis. This identification can have a highly significant association in therapy and prophylaxis. This work has shown a new application of terminal restriction fragment length polymorphism (t-RFLP) method in molecular identification...
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Aula Politechniki Gdańskiej – fragmenty historii
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Structural Analysis of a Peptide Fragment of Transmembrane Transporter Protein Bilitranslocase
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Construction of glucosamine-6-phosphate synthase with an internal hexahistydyl fragment
PublicationL-Glutamine: D-fructose-6-phosphate aminotransferase (EC 2.6.1.16), known also as glucosamine-6-phosphate (GlcN-6-P) syntase, catalyzes the first committed step in the amino sugar biosynthetic pathway in prokaryotic and eukaryotic organisms. The enzyme carries out a complex reaction involving ammonia transfer and sugar phosphate isomerization. GlcN-6-P syntase is an important point of metabolic control of amino sugar biosynthesis...
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Copper binding by the cystatin C fragment. The role of histidine residues
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Ergonomics Assessment of Composite Ballistic Inserts for Bullet- and Fragment-Proof Vests
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Influence of the fragment size on the recycling process of thin-film modules based on CdTe
PublicationFor several years, the production of second generation cells (the so-called thin film), produced from amorphous silicon, cadmium telluride (CdTe) or copper indium (gallium) diselenide (CI(G)S), has been increasing. The total number of end-of-life panels by 2050 is expected to reach 9.57 million tonnes. They contain heavy metals that can be leached into the environment at the land field. The EU directive on waste electrical and...
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Conformational changes of peptidoglycan fragments during their interactions with vancomycin
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ALIS-FLP: amplified ligation selected fragment-length polymorphism method for microbial genotyping
PublicationA DNA fingerprinting method known as ALIS-FLP (amplified ligation selected fragment-length polymorphism) has been developed for selective and specific amplification of restriction fragments from TspRI restriction endonuclease digested genomic DNA. The method is similar to AFLP, but differs in that only one specific restriction enzyme (TspRI) is used. The cohesive ends of the DNA fragments are ligated with two types of oligonucleotide....
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Sposób obliczania parametrów impedancji operatorowej fragmentu obiegu krwi
PublicationPrzedstawiono etapy opracowania przebiegów rejestrowanych w czasie badań medycznych, które mogą służyć do określenia parametrów zastępczej impedancji operatorowej odwzorowującej wybrany fragment obiegu krwi. Na podstawie tak otrzymanej impedancji, możliwe jest określenie konfiguracji zastępczego obwodu elektrycznego fragmentu krwiobiegu. Z zastosowaniem programu, np. PSprice, możliwe jest symulacyjne badanie fizjologicznych zaburzeń...
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Fragrant films on the basis of potato starch
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Fragrant starch-based films with limonene
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Improved Consensus-Fragment Selection in Template-Assisted Prediction of Protein Structures with the UNRES Force Field in CASP13
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Fragment prywatnego księgozbioru gdańskiego kupca George'a Tönnigesa zachowany w zbiorach Biblioteki Gdańskiej PAN
PublicationIn the present holdings of the Gdańsk Library of the Polish Academy of Sciences beside the historical book collections once belonging to Gdańsk patricians (e.g. J. Uphagen, M. Hanow, W. Schlieff and A. Rosenberg), there are remains of a less known private book collection belonging in the 18th century to George Tönniges, a representative of the Gdańsk patriciate. On the one side, these several prints, fortunately survived up till...
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Species - specific detection of the toxic mushrooms Amanita virosa and Amanita verna by PCR amplification of the gpd gene fragment
PublicationZaprojektowano dwie pary starterów do reakcji PCR, które umożliwiają gatunkowo specyficzną amplifikację unikalnych fragmentów genów gpd dla dwóch grzybów kapeluszowych: muchomora wiosennego (Amanita verna) i muchomora jadowitego (Amanita virosa).
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Influence of Fragment Size on the Time and Temperature of Ethylene Vinyl Acetate Lamination Decomposition in the Photovoltaic Module Recycling Process
PublicationPhotovoltaics is a commercially available and reliable technology with significant potential for long-term growth in nearly all global regions. Several research institutes and companies are working on recycling concepts for thin film modules and modules with crystalline cells. The establishment of recycling and reuse technologies appropriate and applicable to all photovoltaics (PV) modules is a key issue to be addressed as part...
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Rola fragmentów wyodrębnionych w języku UML 2
PublicationPrzedmiotem rozważań zaprezentowanych w niniejszej publikacji są zmiany oraz udoskonalenia związane z superstrukturą języka UML, wprowadzone wraz z wersją 2.0 tego standardu. W odróżnieniu od modyfikacji poczynionych w ramach poprzednich rewizji języka, zakres udoskonaleń związanych z przejściem pomiędzy wersjami 1.5 oraz 2.0 określić należy jako znaczny. W niniejszym referacie skoncentrowano się na jednej, ale bardzo znaczącej...
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Damage to Model DNA Fragments from Very Low-Energy (<1 eV) Electrons
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Stan zachowania zabytkowego zamku w Giżycku po awarii fragmentu południowej ściany
PublicationArtykuł dotyczy stanu zachowania murów zabytkowego zamku krzyżackiego w Giżycku po zawaleniu się fragmentu ściany w sierpniu 2007r.
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Structural Analysis and Dynamic Processes of the Transmembrane Segment Inside Different Micellar Environments—Implications for the TM4 Fragment of the Bilitranslocase Protein
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Lipidated Analogs of the LL-37-Derived Peptide Fragment KR12—Structural Analysis, Surface-Active Properties and Antimicrobial Activity
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Numerical modeling of force and contact networks in fragmented sea ice
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Problemy rewaloryzacji krajobrazu kulturowego miasta na przykładzie fragmentu śródmieścia Gdańska - Biskupiej Górki
PublicationTeren Biskupiej Górki stanowi jeden z najcenniejszych krajobrazowo-kulturowych dzielnic Gdańska. Należy tu wymienić zachowane obiekty fortyfikacyjne miasta i XIX-wieczną zabudowę mieszkaniową, nie zniszczoną w czasie działań 1945 roku. O specyfice i unikalnym charakterze w skali miasta stanowi także ukształtowanie terenu Biskupiej Górki, jego położenie w strukturze miasta i dobre warunki przyrodnicze. Niestety, jest to jednocześnie...
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The Immunogenic and Immunoprotective Activities of Recombinant Chimeric T. gondii Proteins Containing AMA1 Antigen Fragments
PublicationToxoplasmosis, one of the most common parasitoses worldwide, is potentially dangerous for individuals with a weakened immune system, but specific immunoprophylaxis intended for humans is still lacking. Thus, efforts have been made to create an efficient universal vaccine for both animals and humans to overcome the shortcomings of currently used treatment methods and protect all hosts against toxoplasmosis. The current work represents...
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Yields and Time-of-Flight Spectra of Neutral High-Rydberg Fragments at the K Edges of the CO2 Molecule
PublicationWe have studied the production of neutral fragments in high-Rydberg (HR) states at the C 1s and O 1s edges of the CO2 molecule by performing two kinds of experiments. First, the yields of neutral HR fragments were measured indirectly by ionizing such fragments in a static electric field and by collecting resulting singly charged positive ions as a function of the photon energy. Such measurements reveal not only excitations below...
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Interplay between Structure and Charge as a Key to Allosteric Modulation of Human 20S Proteasome by the Basic Fragment of HIV-1 Tat Protein
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Inhibitors and Antibody Fragments as Potential Anti-Inflammatory Therapeutics Targeting Neutrophil Proteinase 3 in Human Disease
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Inhibitory and antimicrobial activities of OGTI and HV-BBI peptides, fragments and analogs derived from amphibian skin
PublicationA series of linear and cyclic fragments and analogs of two peptides (OGTI and HV-BBI) isolated from skin secretions of frogs were synthesized by the solid-phase method. Their inhibitory activity against several serine proteinases: bovine beta-trypsin, bovine alpha-chymotypsin, human leukocyte elastase and cathepsin G from human neutrophils, was investigated together with evaluation of their antimicrobial activities against Gram-negative...
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Toxoplasma gondii Recombinant antigen AMA1: Diagnostic Utility of Protein Fragments for the Detection of IgG and IgM Antibodies
PublicationToxoplasma gondii is an important zoonotic protozoan that infects a wide variety of vertebrates as intermediate hosts. For this reason, the diagnosis of this disease is very important and requires continuous improvement. One possibility is to use recombinant antigens in serological tests. Apical membrane antigen 1 (AMA1), a protein located in specific secretory organelles (micronemes) of T. gondii, is very interesting in regard...
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A vector-enzymatic DNA fragment amplification-expression technology for construction of artificial, concatemeric DNA, RNA and proteins for novel biomaterials, biomedical and industrial applications
PublicationA DNA fragment amplification/expression technology for the production of new generation biomaterials for scientific, industrial and biomedical applications is described. The technology enables the formation of artificial Open Reading Frames (ORFs) encoding concatemeric RNAs and proteins. It recruits the Type IIS SapI restriction endonuclease (REase) for an assembling of DNA fragments in an ordered head-to-tail-orientation. The...
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Chromogenic azole diazothiacrown ethers
PublicationZsyntezowane zostały etery koronowe zawierające atomy siarki, dwa ugrupowania azowe oraz fragment pirolu lub imidazolu w makropierścieniu.Zbadana została zdolność zsyntezowanych związków makrocyklicznych pod kątem kompleksowania jonów metali metodą spektrofotometrii UV-vis.Największe zmiany spektralne zaobserwowano pod wpływem jonów ołowiu, miedzi, cynku, niklu, kobaltu oraz srebra.W przypadku jonów metali I i II grupy układu okresowego...
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Habitat displacement effect between two competing owl species in fragmented forests
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DDLMS PCR double digestion Ligation Mediated Suppression PCR - a new technique for bacterial specific differentiation
PublicationA new diagnostic kit for K. oxytoca specific differentiation based on ddLMS PCR (ang. double digest ligation Mediated PCR) technique is shown. As a species-specific DNA fragment pehX gene, encoding the enzyme polygalactouronase, was chosen. The genome sequence of K. oxytoca is digested with two endonucleases: AclI and BclI which cut DNA before and after pehX gene. The polymorphic DNA fragments are ligated with AclI-end-specific...
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Amplification of a single-locus variable-number direct-repeats with restriction fragment length polymorphism (DR-PCR/RFLP) for genetic typing of Acinetobacter baumannii strains
PublicationW celu poszukiwania nowych metod typowania genetycznego szczepów Acinetobacter baumannii przydatnych w szpitalnych badaniach epidemiologicznych przeprowadzono analizę dostępnych w banku genów sekwencji szczepów referencyjnych na obecność nowych motywów repetytywnych. Do badania polimorfizmu sekwencji repetytywnych w szczepach Acinetobacter sp. wykorzystano proste powtórzenia typu "direct repeat" (DR) zlokalizowane w jednym miejscu...
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OBTAINING OF COUMARONE-INDENE RESINS BASED ON LIGHT FRACTION OF COAL TAR 3. COUMARONE-INDENE RESINS WITH METHACRYLIC FRAGMENTS
PublicationThe method for obtaining coumarone-indene resins with methacrylic fragments (CIRM) was developed with the addition of methyl ethacrylate, using a light fraction of coal tar and its fraction boiling within 423–463 К. CIRM was obtained via radical cooligomerization using 2,2'-azobis (2-methyl-propionitrile) as the initiator. The effect of the initiator amount, temperature and reaction time on the yield, softening temperature and...
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Wystąpienie z okazji otrzymania tytułu doktora honoris causa Politechniki Łódzkiej
PublicationZdefiniowano określenie geotechnika i jej nauki wyjściowe, historia rozwoju geotechniki, przedstawienie własnych badań naukowych i nowoczesnej tematyki badawczej w geotechnice. Podano autorską działalność wydawniczą w Polsce i zagranicą.
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Zastosowanie immobilizowanego białka MutS do wychwytywania fragmentów DNA zawierających niesparowane zasady
PublicationBiałko MutS wiąże DNA zawierające błędnie sparowane oraz niesparowane zasady w DNA. Podjęto szereg prób wykorzystania tego białka jako narzędzia do detekcji nieznanych mutacji lub zagęszczania frakcji DNA z niesparowaną zasadą. Dotychczas żadna z metod oparta na użyciu białka MutS nie została wdrożona powszechnie do praktyki laboratoryjnej. Głównym powodem takiego stanu rzeczy jest stosunkowo silne powinowactwo MutS do DNA w pełni...
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Synthesis and antimicrobial activity of truncated fragments and analogs of citropin 1.1: The solution structure of the SDS micelle-bound citropin-like peptides
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Use of Restraints from Consensus Fragments of Multiple Server Models To Enhance Protein-Structure Prediction Capability of the UNRES Force Field
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Soft X-ray Induced Production of Neutral Fragments in High-Rydberg States at the O 1s Ionization Threshold of the Water Molecule
PublicationDissociation of water molecules after soft X-ray absorption can yield neutral fragments in high-Rydberg (HR) states. We have studied the production of such fragments by field ionization and ion time-of-flight (TOF) spectrometry. Neutral HR fragments are created at all resonances below the O 1s ionization potential (IP) and particularly within 1 eV above the O 1s IP. The latter effect is due to the recapture of the O 1s photoelectrons...
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Ekspertyza dotycząca zieleni na terenie fragmentu zabytkowego parku przypałacowego oraz dawnego przypałacowego zespołu oficynowego w Wejherowie
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Novel application of terminal restriction fragments length polymorphism method (t-RFLP) for identification of six clinically important Candida sp.
PublicationTerminal restriction fragments length polymorphism method (t-RFLP) is a modified classical RFLP method. The main difference is based on carrying out PCR using a fluorescently labeled primer or primers. The result of such modification is that after digestion of amplicons only terminal fragments of PCR product (containing fluorescent dye) are visualized. T-RFLP method has found application in environmental microbiology and epidemiology....
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Wystawa malarstwa z okazji piątych urodzin galerii „Od czasu do czasu”
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Fragmental Method KowWIN as the Powerful Tool for Prediction of Chromatographic Behavior of Novel Bioactive Urea Derivatives
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Hazel Grouse occurrence in fragmented forests: habitat quantity and configuration is more important than quality
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Conformational solution studies of the SDS micelle-bound 11-28 fragment of two Alzheimer's β-amyloid variants (E22K and A21G) using CD, NMR, and MD techniques
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Investigation of the Effects of Primary Structure Modifications within the RRE Motif on the Conformation of Synthetic Bovine Herpesvirus 1‐Encoded UL49.5 Protein Fragments
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Inner-shell fragmentation of molecules into neutral fragments in high-Rydberg states induced by soft X-ray excitation with pulsed-field ionization
PublicationIn the present communication, we will show the results of measurements probing the production of neutral high-Rydberg fragments at the K edges of the molecules containing oxygen and nitrogen atoms. The experiments were performed at the Gas Phase beamline of the Elettra synchrotron radiation laboratory (Trieste, Italy), exploiting a combined soft X-ray excitation with pulsed-field ionization and ion time-of-flight (TOF) spectrometry...