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Search results for: cylindryczne silosy
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A first-principles study of electron attachment to the fully hydrated bromonucleobases
PublicationDegradation mechanism of four brominated nucleobases (BrX), potential DNA radiosensitizers, is studied in explicit water solution, using ab initio molecular dynamics. Several fs long dynamics is needed to localize an electron on the nucleobase. Produced by electron attachment BrX anion radical degrades through the bromide anion abstraction, barrier-free (purines) or with low barrier (pyrimidines), to a reactive nucleobase radical....
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Dominant Pathways of Adenosyl Radical-Induced DNA Damage Revealed by QM/MM Metadynamics
PublicationBrominated nucleobases sensitize double stranded DNA to hydrated electrons, one of the dominant genotoxic species produced in hypoxic cancer cells during radiotherapy. Such radiosensitizers can therefore be administered locally to enhance treatment efficiency within the solid tumor while protecting the neighboring tissue. When a solvated electron attaches to 8-bromoadenosine, a potential sensitizer, the dissociation of bromide...
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Left ventricular function after takotsubo is not fully recovered in long-term follow-up: A speckle tracking echocardiography study
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Zagregowana miara oceny stanu dojrzałości organizacji w procesach jej ewolucji.
PublicationCelem artykułu jest wskazanie na koniecznośc opracowywania zagregowanych miar pozwalających na ocenę stanu dojrzałości organizacji informatycznych w odniesieniu do procesów ewolucji takich organizacji. Autorzy zwracają uwagę na to, jak w oparciu o wykorzystanie miary złożoności projektu oceniać gotowość organizacji do ewolucyjnych i transformacyjnych zmian. Artykuł został podzielony na cztery główne części. W pierwszej z nich została...
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Membrane Sterols Modulate the Binding Mode of Amphotericin B without Affecting Its Affinity for a Lipid Bilayer
PublicationMembrane-active antibiotics are known to selectively target certain pathogens based on cell membrane properties, such as fluidity, lipid ordering, and phase behavior. These are in turn modulated by the composition of a lipid bilayer and in particular by the presence and type of membrane sterols. Amphotericin B (AmB), the golden standard of antifungal treatment, exhibits higher activity toward ergosterol-rich fungal membranes, which...
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Influence of orientational disorder on the optical absorption properties in hybrid metal‐halide perovskite CH3NH3PbI3. A combined DFT/TD‐DFT and experimental study.
PublicationAn experimental and theoretical investigation is reported to analyze the relation between the structural and absorption properties of CH3NH3PbI3 in the tetragonal phase. More than 3000 geometry optimizations were performed in order to reveal the structural disorder and to identify structures with the lowest energies. The electronic structure calculations provide an averaged band gap of 1.674 eV, which is in excellent agreement...
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Molecular Recognition in Complexes of TRF Proteins with Telomeric DNA
PublicationTelomeres are specialized nucleoprotein assemblies that protect the ends of linear chromosomes. In humans and many other species, telomeres consist of tandem TTAGGG repeats bound by a protein complex known as shelterin that remodels telomeric DNA into a protective loop structure and regulates telomere homeostasis. Shelterin recognizes telomeric repeats through its two major components known as Telomere Repeat-Binding Factors, TRF1...
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Molecular basis of the osmolyte effect on protein stability: a lesson from the mechanical unfolding of lysozyme
PublicationOsmolytes are a class of small organic molecules that shift the protein folding equilibrium. For this reason, they are accumulated by organisms under environmental stress, and find applications in biotechnology where proteins need to be stabilized or dissolved. However, despite years of research, debate continues over the exact mechanisms underpinning the stabilizing and denaturing effect of osmolytes. Here, we simulated the mechanical...
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DNAffinity: a machine-learning approach to predict DNA binding affinities of transcription factors
PublicationWe present a physics-based machine learning approach to predict in vitro transcription factor binding affinities from structural and mechanical DNA properties directly derived from atomistic molecular dynamics simulations. The method is able to predict affinities obtained with techniques as different as uPBM, gcPBM and HT-SELEX with an excellent performance, much better than existing algorithms. Due to its nature, the method can...
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COMPARISON OF PROPAGATION METHOD IN IN VITRO AND IN VIVO CONDITION OF Lonicera caerulea L.
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Probable allergic contact dermatitis mimicking erythema muliforme
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Molywood: streamlining the design and rendering of molecular movies
PublicationMotivation High-quality dynamic visuals are needed at all levels of science communication, from the conference hall to the classroom. As scientific journals embrace new article formats, many key concepts – particularly in structural biology – are also more easily conveyed as videos than still frames. Notwithstanding, the design and rendering of a complex molecular movie remain an arduous task. Here, we introduce Molywood, a robust...
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Chemical reactivity and antimicrobial activity of N-substituted maleimides
PublicationZsyntezowano kilkanaście N-podstawionych maleimidów, zawierających w swojej strukturze podstawniki o różnej wielkości i polarności.Maleimidy o charakterze obojętnym wykazywały silny efekt przeciwgrzybowy; ich aktywność przeciwbakteryjna była zróżnicowana. Niską aktywność przeciwbakteryjną, ale wysoką aktywność cytostatyczną stwierdzono dla maleimidów o charakterze zasadowym. Reaktywność chemiczna i lipofilowość miały wpływ na aktywność...
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Electron collisions with cyanoacetylene HC3N : Vibrational excitation and dissociative electron attachment
PublicationWe experimentally probe electron collisions with HC3N in the energy range from 0 to 10 eV with the focus on vibrational excitation and dissociative electron attachment. The vibrational excitation cross sections show a number of resonances which are mode specific: the two dominant π∗ resonances are visible in the excitation of all the vibrational modes; however, broad σ ∗ resonances are visible only in certain bond-stretching vibrational...
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Analiza stateczności powłok warstwowych obciążonych termicznie. - A. Sabik.
PublicationPracę poświęcono numerycznej analizie kompozytowych powłok warstwowych poddanych wpływom termicznym w postaci równomiernego ogrzania lub gradientu temperatury. Zaprezentowano efektywny algorytm numeryczny umożliwiający analizę stateczności paneli wielowarstwowych, polegający na realizacji analizy przyrostowej z uwględnieniem dużych deformacji w ramach stacjonarnego opisu Lagrange'a. W każdym kroku przyrostowym kontrolowano stan...
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Z pamięci wody - wyjątki o pionierach gdańskich wodociągów i pogmatwanych losach ich dzieł
PublicationArtykuł opowiada o początkach nowoczesnych wodociągów w Gdańsku, poczynając od pionierskiego projektu - Magistrali Pręgowsko-Oruńskiej, wraz z ujęciem wody w Pręgowie, a kończąc na etapie tworzenia podwalin scentralizowanego systemu wodociągowego, którego rozwój trwa do dziś. Publikacja nawiązuje do wątków biograficznych dawnych wodociągowców i opisuje późniejsze losy niektórych historycznych obiektów.
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Excitation energy migration in uniaxially oriented polymer films: a comparison between strongly and weakly organized systems
PublicationMechanizm wieloetapowej migracji energii w osiowo rozciąganych foliach polimerowych jest analizowany w układach o silnej i słabej orientacji molekuł barwników umieszczonych w matrycach poliwinylowych. Porównanie tych różnie orientujących się układów bazuje na zjawisku depolaryzacji stężeniowej anizotropii emisji, symulacjach Monte Carlo i wartościach liniowego dichroizmu. Pokazano, że uporządkowanie momentów przejścia fluoroforów...
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Paget disease and intraductal carcinoma of breast - Female, 62 - Tissue image [315063000526841]
Open Research DataThis is the histopathological image of BREAST tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format.
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Klaudia Słowy
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Near Boundary Acoustic Streaming in Ni-Fe alloy electrodeposition control
PublicationSilny wpływ na osadzanie elektrochemiczne stopów metali mają zjawiska występujące w warstwie dyfuzyjnej, modyfikujące rozkład koncentracji jonów w odmienny sposób dla każdego ze składników. Artykuł przedstawia metodę pobudzania akustycznego prowadzącą do kontrolowanego, jednorodnego osadzania stopów. Metoda ta polega na generowaniu prze-pływu akustycznego prostopadle do powierzchni osadzania, w polu stojącej fali akustycznej równoległej...
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Squamous cell carcinoma, HPV positive - Male, 57 - Tissue image [9140730014141181]
Open Research DataThis is the histopathological image of TONSIL tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format.
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N-(4-Methylpiperazin-4-ium-1-yl)dithiocarbamate sesquihydrate
PublicationW strukturze krystalicznej tytułowego związku, C6H13N3S2-1.5H2O, obserwuje się słabe wiązania wodorowe typu NH...S pomiędzy cząsteczkami jonów obojnaczych. Prowadzi to do wytworzenia pofałdowanej struktury warstwowej, równoległej do płaszczyzny (100). W jednostce asymetrycznej występują trzy niezależne cząsteczki wody, obsadzone połówkowo.
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Pupil detection supported by Haar feature based cascade classifier for two-photon vision examinations
PublicationThe aim of this paper is to present a novel method, called Adaptive Edge Detection (AED), of extraction of precise pupil edge coordinates from eye image characterized by reflections of external illuminators and laser beams. The method is used for monitoring of pupil size and position during psychophysical tests of two-photon vision performed by dedicated optical set-up. Two-photon vision is a new phenomenon of perception of short-pulsed...
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Mechanism of reaction of RNA-dependent RNA polymerase from SARS-CoV-2
PublicationWe combine molecular dynamics, statistical mechanics, and hybrid quantum mechanics/molecular mechanics simulations to describe mechanistically the severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) RNA-dependent RNA polymerase (RdRp). Our study analyzes the binding mode of both natural triphosphate substrates as well as remdesivir triphosphate (the active form of drug), which is bound preferentially over ATP by RdRp while...
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Etazene (N,N-diethyl-2-{[(4-ethoxyphenyl)methyl]-1H-benzimidazol-1-yl}-ethan-1-amine (dihydrochloride)): a novel benzimidazole opioid NPS identified in seized material: crystal structure and spectroscopic characterization
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Zieleń wodna i terenów zalewowych w parku Wodnym w Poznaniu
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Antiglycoxidative properties of amantadine – a systematic review and comprehensive in vitro study
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α-Lipoic Acid Strengthens the Antioxidant Barrier and Reduces Oxidative, Nitrosative, and Glycative Damage, as well as Inhibits Inflammation and Apoptosis in the Hypothalamus but Not in the Cerebral Cortex of Insulin-Resistant Rats
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Paraganglioma, NOS - Male, 67 - Tissue image [8160730027005431]
Open Research DataThis is the histopathological image of RETROPERITONEUM AND PERITONEUM tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format.
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Squamous cell carcinoma, HPV positive - Male, 57 - Tissue image [9140730014146641]
Open Research DataThis is the histopathological image of TONSIL tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format.
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Paraganglioma, NOS - Male, 67 - Tissue image [8160730027001801]
Open Research DataThis is the histopathological image of RETROPERITONEUM AND PERITONEUM tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format.
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Paraganglioma, NOS - Male, 67 - Tissue image [8160730027008051]
Open Research DataThis is the histopathological image of RETROPERITONEUM AND PERITONEUM tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format.
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Paraganglioma, NOS - Male, 67 - Tissue image [8160730027004961]
Open Research DataThis is the histopathological image of RETROPERITONEUM AND PERITONEUM tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format.
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A comprehensive overview of software product management challenges
PublicationThe principal focus of software product management is to ensure the economic success of the product, which means to prolong the product life as much as possible with modest expenditures to maximizs profits. Software product managers play an important role in the software development organization while being responsible for the strategy, business case, product roadmap, high-level requirements, product deployment (release-management),...
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Space-Time Conservation Method applied to numerical solution of water hammer equations
PublicationArtykuł poświęcony jest metodzie czasoprzestrzennych objętości skończonych (STC) zastosowanej do przypadku uderzenia hydraulicznego w stalowym przewodzie pracującym pod ciśnieniem. Metoda STC ze względu na swoje własności numeryczne - m.in. wysoką dokładność - może być interesującą alternatywą dla tradycyjnych metod numerycznych, szczególnie w przypadku, gdy efekty numeryczne mają bardzo silny wpływ na rozwiązanie, tym samym utrudniając...
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Medullary thyroid carcinoma - Male, 70 - Tissue image [4120730022874111]
Open Research DataThis is the histopathological image of THYROID GLAND tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format.
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Improving the Workflow for Creation of Textual Versions of Polish Historical Documents
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Molecular mechanism and energetics of coupling between substrate binding and product release in the F 1 -ATPase catalytic cycle
PublicationF1-ATPase is a motor protein that couples the rotation of its rotary γ subunit with ATP synthesis or hydrolysis. Single-molecule experiments indicate that nucleotide binding and release events occur almost simultaneously during the synthesis cycle, allowing the energy gain due to spontaneous binding of ADP to one catalytic β subunit to be directly harnessed for driving the release of ATP from another rather than being dissipated...
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Expert consensus for the diagnosis and treatment of patient with hyperuricemia and high cardiovascular risk
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Structure and Randomness in Planning and Reinforcement Learning
PublicationPlanning in large state spaces inevitably needs to balance the depth and breadth of the search. It has a crucial impact on the performance of a planner and most manage this interplay implicitly. We present a novel method \textit{Shoot Tree Search (STS)}, which makes it possible to control this trade-off more explicitly. Our algorithm can be understood as an interpolation between two celebrated search mechanisms: MCTS and random...
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Miłosz Jan Raczyński dr inż. arch.
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Miłosz Konrad Misiek mgr
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Miłosz Józef Smolik dr hab. inż.
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Optical activity of benzophenone and thiobenzophenone generated by spontaneous crystallization and inclusion complexation with cholic acid.
PublicationOtrzymano związki inkluzyjne benzofenonu i jego tioanalogu z kwasem cholowym. W zależności od stosowanej metody syntezy kompleksów inkluzyjnych benzofenonu powstawały one w dwóch różnych postaciach polimorficznych. Jedna z nich wykazuje istnienie cząsteczek gościa w czterech konformacjach, przy czym dominuje konformer o helikalności M. Struktura krystalograficzna kompleksu tiobenzofenonu z kwasem cholowym ujawniła obecność tylko...
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Hydraulika siłowa urządzeń okrętowych (PG_00056306) - WYKŁAD - OCE, SiUO, sem 4, rok akademicki 2023/2024, lato
e-Learning CoursesHydraulika siłowa urządzeń okrętowych (PG_00056306) - WYKŁADdla OCE, SiUO, sem4
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Hydraulika siłowa urządzeń okrętowych (PG_00056306) - LABORATORIUM - OCE, SiUO, sem 4, rok akademicki 2023/2024, lato
e-Learning CoursesHydraulika siłowa urządzeń okrętowych (PG_00056306) - LABORATORIUMdla OCE, SiUO, sem 4
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Smart city and fire detection using thermal imaging
PublicationIn this paper, we summarize the results obtained from fire experiments. The aim of the work was to develop new methods of fire detection using IR thermal imaging cameras and dedicated image processing. We conducted 4 experiments in different configurations and with the use of different objects. The conducted experiments have shown the great usefulness of infrared cameras for detecting the seeds of a fire. Even cheap low-resolution...
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Metabolic responses to a 48-h ultra-marathon run in middle-aged male amateur runners
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Zieleń przywodna w zagospodarowaniu parku za szkołą morską w Darłowie
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Agomelatine's antiglycoxidative action—In vitro and in silico research and systematic literature review
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