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Search results for: GENETIC FINGERPRINTING
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Extinction Event Concepts for the Evolutionary Algorithms
PublicationThe main goal of this present paper is to propose a structure for a tool helping to determine how algorithm would react in a real live application, by checking it's adaptive capabilities in an extreme situation. Also a different idea of an additional genetic operator is being presented. As Genetic Algorithms are directly inspired by evolution, extinction events, which are elementary in our planet's development history, became...
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General Genetics QUIZZ
e-Learning CoursesCelem wykładu będzie zapoznanie Studentów z najważniejszymi odkryciami, prawami i terminami genetyki. Wykład będzie obejmował kluczowe zagadnienia genetyki: zasady dziedziczenia cech i chorób, mechanizmy regulacji ekspresji genów i mechanizmy zmienności genetycznej. Wykład będzie kładł duży nacisk na wyjaśnienie, szczególnie istotnego dla biotechnologów, molekularnego podłoża dziedziczności, zmienności genetycznej i regulacji...
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General Genetics webinarium_3.04.2020
e-Learning CoursesWykład przybliżający studentom problemy Genetyki ogólnej, prowadzony w języku angielskim.
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IEEE Workshop on Memetic Algorithms
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Advances in Human Genetics
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Immunizing the Hillcast Method against the Known-Plaintext Attack using Periodic Key Exchange
PublicationThis paper considers a Joint Fingerprinting and Decryption method, called Hillcast, for the copyright protection and traitor tracing in case of Video on Demand services. Because the method is based on the Hill cipher, it is vulnerable to a known-plaintext attack. The goal of this paper is to present an efficient periodic key exchange mechanism to make this method secure without compromising its scalability, imperceptibility or...
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Principles and applications of Ligation Mediated PCR methods for DNA-based typing of microbial organisms
PublicationA significant number of DNA-based techniques has been introduced into the field of microorganisms’ characterization and taxonomy. These genomic fingerprinting methods were developed to detect DNA sequence polymorphisms by using general principles, such as restriction endonuclease analysis, molecular hybridization, and PCR amplification. In recent years, some alternative techniques based on ligation of oligonucleotide adapters before...
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A New Double Digestion Ligation Mediated Suppression PCR Method for Simultaneous Bacteria DNA-Typing and Confirmation of Species: An Acinetobacter sp. Model
PublicationWe have designed a new ddLMS PCR (double digestion Ligation Mediated Suppression PCR) method based on restriction site polymorphism upstream from the specific target sequence for the simultaneous identification and differentiation of bacterial strains. The ddLMS PCR combines a simple PCR used for species or genus identification and the LM PCR strategy for strain differentiation. The bacterial identification is confirmed in the...
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Porównanie algorytmów MGA i NGA do projektowania i optymlizacji kombinacyjnych układów cyfrowych z algorytmem MLCEA.
PublicationW artykule zaprezentowano porównanie algorytmów ewolucyjnych do projektowania i optymalizacji kombinacyjnych układów cyfrowych. Porównano algorytmy MGA (Multiobjective Genetic Algorithm) i NGA (Genetic Algorithm with N-cardinality Reprezentation) z utworzonym algorytmem MLCEA (Multi-Layer Chromosome Evolutionary Algorithm), bazującym na reprezentacji osobników w postaci chromosomów wielowarstwowych. Otrzymane wyniki dla algorytmu...
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Research of Accuracy of RSSI Fingerprint-Based Indoor Positioning BLE System
PublicationRadio localization in indoor environment is still a challenging task due to environment volatility. In the paper are compared achieved localization accuracies for RSSI-Fingerprinting method utilizing Bluetooth Low Energy (BLE) for two different environments: large empty hall and narrow corridor. Measurements were done by 6 different smartphones of 3 different producers, which makes those measurements unique as accuracies achieved...
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Research of Accuracy of RSSI Fingerprint-Based Indoor Positioning BLE System
PublicationRadio localization in indoor environment is still a challenging task due to environment volatility. In the paper are compared achieved localization accuracies for RSSI-Fingerprinting method utilizing Bluetooth Low Energy (BLE) for two different environments: large empty hall and narrow corridor. Measurements were done by 6 different smartphones of 3 different producers, which makes those measurements unique as accuracies achieved...
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Satish Raina prof. dr
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Review of Methods for Diagnosing the Degradation Process in Power Units Cooperating with Renewable Energy Sources Using Artificial Intelligence
PublicationThis work is based on a literature review (191). It mainly refers to two diagnostic methods based on artificial intelligence. This review presents new possibilities for using genetic algorithms (GAs) for diagnostic purposes in power plants transitioning to cooperation with renewable energy sources (RESs). The genetic method is rarely used directly in the modeling of thermal-flow analysis. However, this assignment proves that the...
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Inter Applied Chemistry Programme 3 Miodrag Guzvic
e-Learning CoursesInter Applied Chemistry Programme 3 Dr. Miodrag Gužvić Title: Genetic toxicology
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ALIS-FLP: amplified ligation selected fragment-length polymorphism method for microbial genotyping
PublicationA DNA fingerprinting method known as ALIS-FLP (amplified ligation selected fragment-length polymorphism) has been developed for selective and specific amplification of restriction fragments from TspRI restriction endonuclease digested genomic DNA. The method is similar to AFLP, but differs in that only one specific restriction enzyme (TspRI) is used. The cohesive ends of the DNA fragments are ligated with two types of oligonucleotide....
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Floating treatment wetlands combined with microbial fuel cells (FTW-MFC) batch experiment: plant microscopy observations
Open Research DataThis data collection includes plant root microscope findings. Species chosen for observation: Iris pseudacorus (IP) and Phragmites australis (PA). The anatomical measurements were taken with an optical microscope (Delta Optical Genetic Pro with 3MP camera; Delta Optical, Poland) that had lens magnifications of 4x and 10x and an ocular magnification...
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Using similar classification tasks in feature extractor learning
PublicationThe article presents and experimentally verify the idea of automatic construction of feature extractors in classification problems. The extractors are created by genetic programming techniques using classification examples taken from other problems then the problem under consideration.
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Marek Zienkiewicz dr inż.
PeopleDoctor engineer Marek Hubert Zienkiewicz is a graduate of the Faculty of Geodesy, Spatial Engineering and Construction at the University of Warmia and Mazury in Olsztyn. During his engineering, master's and doctoral studies he developed his scientific interests under the supervision of representatives of the Olsztyn geodetic compensatory calculus school. In 2011, he obtained the title of Master of Science in Geodesy and Cartography,...
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Runner bean (Phaseolus coccineus) histological cross section observations of stems, leaves, and roots using light microscope
Open Research DataThis data set contains images of root crown, root, stem, and leaf cross-sections of runner bean (Phaseolus coccineus). Runner bean seedlings (3-5 cm) were planted on soil amended with poultry (chicken) manure biochars pyrolized at various temperatures (400, 500, and 600 C degrees). Three different poultry manure biochar materials (450, 500, and 600°C)...
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General Genetics, I stopień Biotechnologia
e-Learning CoursesCelem wykładu będzie zapoznanie Studentów z najważniejszymi odkryciami, prawami i terminami genetyki. Wykład będzie obejmował kluczowe zagadnienia genetyki: zasady dziedziczenia cech i chorób, mechanizmy regulacji ekspresji genów i mechanizmy zmienności genetycznej. Wykład będzie kładł duży nacisk na wyjaśnienie, szczególnie istotnego dla biotechnologów, molekularnego podłoża dziedziczności, zmienności genetycznej i regulacji...
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Małgorzata Pawłowicz dr n. med.
PeopleMałgorzata Pawłowicz MD PhD is a paediatrician and paediatric neurologist (Department of Developmental Neurology; Medical University of Gdańsk, Poland) and a resident in clinical genetics (Genetic Outpatient Clinic, Children's Memorial Health Institute in Warsaw, Poland). She studied medicine and received her Master Degree in Paediatrics and Paediatric Neurology at Medical University of Gdańsk. Dr. Pawłowicz completed her PhD studies...
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In Silico Safety Assessment of Bacillus Isolated from Polish Bee Pollen and Bee Bread as Novel Probiotic Candidates
PublicationBacillus species isolated from Polish bee pollen (BP) and bee bread (BB) were characterized for in silico probiotic and safety attributes. A probiogenomics approach was used, and in-depth genomic analysis was performed using a wide array of bioinformatics tools to investigate the presence of virulence and antibiotic resistance properties, mobile genetic elements, and secondary metabolites. Functional annotation and Carbohydrate-Active...
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Żywność funkcjonalna- najważniejsze osiągnięcia w zakresie badań i wykorzystania
PublicationW wielu ośrodkach naukowych trwają badania ukierunkowane na poznanie mechanizmów działania składników żywności funkcjonalnej na poziomie ekspresji genetycznej, co stwarza możliwość precyzyjniejszego scharakteryzowania funkcji bioaktywnych składników diety z uwzględnieniem zmienności genetycznej populacji. Daje to w efekcie bardziej wiarygodne wyniki badań naukowych dotyczących wpływu bioaktywnych składników diety na funkcjonowanie...
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Jerzy H. Czembor Prof. dr hab.
PeopleYear of birth: 1965, Poland, Work address: Plant Breeding and Acclimatization Institute –National research Institute (IHAR-PIB), Radzikow, 05-870 Blonie, Poland. Scientific disciplines: agricultural sciences, plant pathology, plant physiology, genetics. Specialization: phytopathology, mycology, plant genetics, molecular genetics, plant breeding, breeding for disease resistance, biotechnology, evaluation of genetic resources,...
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Which is better in fat times and in lean times: the macho man vs. the nice guy? Study 1 dataset
Open Research DataThe dataset from cross-cultural study conducted in Poland and Norway in the area of gender stereotypes. Our study was conducted in two countries differing with regard to gender equality indices relating to the extent to which men are allowed to manifest gender-atypical behavior and influencing mate preferences of women. Polish (N = 106) and Norwegian...
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Anna Jakubczyk-Gałczyńska dr inż.
People2012r. 15th International Symposium of Students and Young Mechanical Engineers "Advances in chemical and mechanical engineering" w Gdańsku - publikacja 2014r. XIV Konferencja Naukowa Doktorantów Wydziałów Budownictwa w Szczyrku - referat i publikacja 2014r. ICEE-2014 - International Conference on Environmental Engineering w Wilnie - publikacja 11.2015r. XIV Sympozjum Wpływy Sejsmiczne...
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Waldemar Kamiński prof. dr hab. inż.
People1978 - 1985 The Office for Geodesy and Rural Areas in Elbląg 1985 - 2017 University of Warmia and Mazury in Olsztyn 2017 - present Gdańsk University of Technology Science specialisation: non-standard geodetic calculations
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Metoda diagnostyki cieplno-przepływowej turbin parowych wykorzystująca elementy algorytmów genetycznych
PublicationRozprawa doktorska poświęcona jest opisowi budowania metody diagnostyki cieplno-przepływowej z wykorzystaniem elementów algorytmów genetycznych. Do tworzenia założeń i algorytmów metody posłużono się przykładem funkcjonowania bloku elektrowni kondensacyjnej ze szczególnym uwzględnieniem układu łopatkowego turbiny parowej. Celem pracy jest zbudowanie metody diagnostyki cieplno-przepływowej. Zadaniem metody jest przeprowadzenie procesu...
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On a Method of Efficiency Increasing in Kaplan Turbine
PublicationThis paper presents a method of increasing efficiency in Kaplan-type turbine. The method is based on blade profile optimisation together with modelling the interaction between rotor and stator blades. Loss coefficient was chosen as the optimisation criterion, which is related directly to efficiency. Global optimum was found by means of Genetic Algorithms, and Artificial Neural Networks were utilised for approximations to reduce...
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Molecular epidemiology of Serratia marcescens in two hospitals in Danzig, Poland, over a 5-year period.Molecular epidemiology of Serratia marcescens in two hospitals in Gdańsk, Poland, over a 5-year period.
PublicationW pracy badano zmiany populacji Serratia marcescens w ciągu 5 lat w dwóch szpitalach klinicznych Gdańska. Posłużono się wartościami MIC, wynikami typowania genetycznego RAPD-PCR, PFGE i nową metodą ADSRRS-fingerprinting oraz analizą beta-laktamaz o rozszerzonym spektrum substratowym (ESBL). Dzięki określeniu lekowrażliwości na najnowsze antybiotyki beta-laktamowe wykryto fenotypy wykazujące derepresję cefalosporynazy AmpC u 23%...
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ON DYNAMICS OF ELASTIC NETWORKS WITH RIGID JUNCTIONS WITHIN NONLINEAR MICRO-POLAR ELASTICITY
PublicationWithin the nonlinear micropolar elasticity we discuss effective dynamic (kinetic) properties of elastic networks with rigid joints. The model of a hyperelastic micropolar continuum is based on two constitutive relations, i.e., static and kinetic ones. They introduce a strain energy density and a kinetic energy density, respectively. Here we consider a three-dimensional elastic network made of three families of elastic fibers connected...
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Novel staphylococci nucH taxonomical marker used in identification of human-associated Staphylococcus succinus subsp. casei
PublicationThe aim of our study was to assess the sequencing of unique nucH gene fragment based on performed bioinformatics analysis as a novel diagnostic method for the identification of difficult to identify staphylococcal human pathogenic strains. Initially, PCR-RFLP-rrn analysis specific to the spacers between 16SrDNA and 23SrDNA followed by HhaI restriction analysis was performed. Further, sequencing of nucH and 16S rDNA genes fragments...
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Dagmara Lisman PhD
PeopleScientist, biologist, forensic geneticist. She completed her master's studies at the West Pomeranian University of Technology in Szczecin, at the Faculty of Biology, and obtained a doctoral degree in forensic genetics at the Pomeranian Medical University in Szczecin. Currently, he works as an assistant at the Department of Forensic Medicine of the same university. Her research, conducted at the Department of Forensic Genetics at...
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Optimisation of turbine shaft heating process under steam turbine run-up conditions
PublicationAn important operational task for thermal turbines during run-up and run-down is to keep the stresses in the structural elements at a right level. This applies not only to their instantaneous values, but also to the impact of them on the engine lifetime. The turbine shaft is a particularly important element. The distribution of stresses depends on geometric characteristics of the shaft and its specific locations. This means a groove manufactured...
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T-cell lymphoma, NOS - Unknown, 74 - Tissue image [3290730016639661]
Open Research DataThis is the histopathological image of LYMPH NODES tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format.
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T-cell lymphoma, NOS - Unknown, 74 - Tissue image [3290730016632401]
Open Research DataThis is the histopathological image of LYMPH NODES tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format.
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T-cell lymphoma, NOS - Unknown, 74 - Tissue image [3290730016633901]
Open Research DataThis is the histopathological image of LYMPH NODES tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format.
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T-cell lymphoma, NOS - Unknown, 74 - Tissue image [3290730016639861]
Open Research DataThis is the histopathological image of LYMPH NODES tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format.
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T-cell lymphoma, NOS - Unknown, 74 - Tissue image [3290730016637311]
Open Research DataThis is the histopathological image of LYMPH NODES tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format.
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Gender approach to multi-objective optimization of detection systems by pre-selection of criteria
PublicationA novel idea of performing evolutionary computations for solving highly-dimensional multi-objective optimization (MOO) problems is proposed. The information about individual genders is applied. This information is drawn out of the fitness of individuals and applied during the parental crossover in the evolutionary multi-objective optimization (EMO) processes. The paper introduces the principles of the genetic-gender approach (GGA)...
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Gender approach to multi-objective optimization of detection systems by pre-selection of criteria
PublicationA novel idea of performing evolutionary computations for solving highly-dimensional multi-objective optimization (MOO) problems is proposed. The information about individual genders is applied. This information is drawn out of the fitness of individuals and applied during the parental crossover in the evolutionary multi-objective optimization (EMO) processes. The paper introduces the principles of the genetic-gender approach (GGA)...
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Gender approach to multi-objective optimization of detection systems by pre-selection of criteria
PublicationA novel idea of performing evolutionary computations for solving highly-dimensional multi-objective optimization (MOO) problems is proposed. The information about individual genders is applied. This information is drawn out of the fitness of individuals and applied during the parental crossover in the evolutionary multi-objective optimization (EMO) processes. The paper introduces the principles of the genetic-gender approach (GGA)...
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Future of medicine: personalized oncology
PublicationUnderstanding genetic and epigenetic mechanisms of tumorigenesis allows identifying many vital mutations affected the formation of various malignancies. This led to the discovery of a new therapeutic approach, based on molecular mechanisms in the world of medicine, which is called personalized medicine (PM). This review aims to outline the state of the art of the personalized medicine in treatment, taking into account anti-cancer...
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The last flight of F/O Tadeusz Stabrowski. Identification of the polish pilot
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Knowledge and Attitudes of Future Healthcare Professionals Toward Rare Diseases
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Social Differentiation of the Perception and Human Tissues Donation for Research Purposes.
PublicationThe willingness to donate human biological material for research purposes is shaped by socio-cultural factors; however, there is a lack of studies analysing the social perception of different human tissues, which may affect such willingness. This study aimed to distinguish different sociocultural categories of human tissues and types of potential donors based on their willingness to donate material. Quantitative research was...
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Social differentiation of the perception and human tissues donation for research purposes
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N6-methyladenosine regulates the stability of RNA:DNA hybrids in human cells
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Prediction of skin color, tanning and freckling from DNA in Polish population: linear regression, random forest and neural network approaches
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An insertion/deletion polymorphism of the dihydrofolate reductase (DHFR) gene is associated with serum and red blood cell folate concentrations in women
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