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Ultrasound assisted synthesis of 3-alkynyl substituted 2-chloroquinoxaline derivatives: Their in silico assessment as potential ligands for N-protein of SARS-CoV-2
PublikacjaIn view of recent global pandemic the 3-alkynyl substituted 2-chloroquinoxaline framework has been explored as a potential template for the design of molecules targeting COVID-19. Initial in silico studies of representative compounds to assess their binding affinities via docking into the N-terminal RNA-binding domain (NTD) of N-protein of SARS-CoV-2 prompted further study of these molecules. Thus building of a small library of...
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The J-curve phenomenon revisited again: SPRINT outcomes favor target systolic blood pressure below 120 mmHg
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Fluorescence studies by quenching and protein unfolding on the interaction of bioactive compounds in water extracts of kiwi fruit cultivars with human serum albumin
PublikacjaThe main aim of this investigation was to characterize new kiwi fruit cultivars after cold storage treatment and to determine the similarities and differences between them, using spectroscopic methods. The chemometric comparison of kiwi fruit cultivars based on physicochemical indices during cold storage was carried out. All kiwi fruit cultivars showed a high level of correlation between the contents of phenolic compounds (polyphenols,...
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The effect of sunscreen 4‐methylbenzylidene camphor in different and reproductive models, its bioaccumulation and molecular effects on ligand‐receptor interaction, and protein expression
Publikacja4-Methylbenzylidene camphor (4-MBC) is a photo-absorbing UV filter prevalently used in cosmetics, which can be absorbed into circulation and cause systemic effects. 4-MBC is continued to be released in the environment despite the growing knowledge about its bioaccumulation and endocrine disrupting effects. Previous reviews have mentioned UV-filter together but this review considers 4-MBC alone, due to its prevalence and concerning...
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Proprotein Convertase Subtilisin/Kexin Type 9, Angiopoietin-Like Protein 8, Sortilin, and Cholesteryl Ester Transfer Protein—Friends of Foes for Psoriatic Patients at the Risk of Developing Cardiometabolic Syndrome?
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Patterned protein microarrays for bacterial detection. Langmuir**2003 vol.19 s. 436-439, 5 rys. bibliogr. 25 poz. Specyficzne mikroukłady protein do wykrywania bakterii.
PublikacjaSkonstruowano i przetestowano specyficzne mikroukłady przeciwciał selektyw-nie wiążących bakterie. Otrzymane układy umożliwiają wykrywanie bakterii E.coli0157:H7 oraz Renibacterium salmoninarum (RS). Matryce wytworzono techni-ką nadruku mikrokontaktów (ćCP). Charakterystykę układów uzyskano stosującmikroskopię skaningową (SPM). Ustalono, że selektywność otrzymanych układówobniża się podczas ekspozycji na bakterie niespecyficzne.
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Depression as is Seen by Molecular Spectroscopy. Phospholipid- Protein Balance in Affective Disorders and Dementia
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A comparative study of water distribution and dehydrin protein localization in maturing pea seeds
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Mapping Mechanostable Pulling Geometries of a Therapeutic Anticalin/CTLA-4 Protein Complex
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Molecular dynamics insights into protein‐glycosaminoglycan systems from microsecond‐scale simulations
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Local and long range potentials for heparin‐protein systems for coarse‐grained simulations
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Chromatin-associated microprocessor assembly is regulated by the U1 snRNP auxiliary protein PRP40
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Hot spot identification by ligand-protein surface interactions mapping – in silico study
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Prediction of Protein Structure by Template-Based Modeling Combined with the UNRES Force Field
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Investigation of Protein Folding by Coarse-Grained Molecular Dynamics with the UNRES Force Field
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Performance of protein-structure predictions with the physics-based UNRES force field in CASP11
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Subarachnoid Space: New Tricks by an Old Dog
PublikacjaPurpose: The purpose of the study was to: (1) evaluate the subarachnoid space (SAS) width and pial artery pulsation in both hemispheres, and (2) directly compare magnetic resonance imaging (MRI) to near-infrared transillumination/backscattering sounding (NIR-T/BSS) measurements of SAS width changes in healthy volunteers.Methods: The study was performed on three separate groups of volunteers, consisting in total of 62 subjects (33...
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Electron impact fragmentation of pyrrole molecules studied by fluorescence emission spectroscopy
PublikacjaThe fluorescence emission spectroscopy using electron impact excitation technique was employed to study fragmentation processes of the gas phase pyrrole molecules. The following excited fragmentation species were observed by detection of their fluorescence decay: the atomic hydrogen H(n), n = 4-7 and the diatomic CH(A2Δ), CN(B2Σ+), NH(A3Π) and C2(d3Πg) fragments. These atomic and molecular products differ from those previously...
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Crystal structure and physical properties of a novel ternary compound La15MoxGe9
PublikacjaWe present the synthesis, structural characterization and physical properties measurements of a new compound, La15MoxGe9 in Mn5Si3-type derived structure with interstitial Mo. The sample was synthesized by arc-melting method. La15MoxGe9 crystallizes in non-centrosymmetric hexagonal structure P63mc (#186) with lattice parameters a = b = 15.495(5) Å and c = 6.917(2) Å. The refinement on single X-ray diffraction data show that interstitial...
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Multi-objective optimization of tool wear, surface roughness, and material removal rate in finishing honing processes using adaptive neural fuzzy inference systems
PublikacjaHoning processes are usually employed to manufacture combustion engine cylinders and hydraulic cylinders. A crosshatch pattern is obtained that favors the oil flow. In this paper, Adaptive Neural Fuzzy Inference System (ANFIS) models were obtained for tool wear, average roughness Ra, cylindricity and material removal rate in finish honing processes. In addition, multi-objective optimization with the desirability function method...
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Prezentacja cyklu 17 prac fotograficznych na wystawie "Antropocen" w Galerii Sztuki im. J. Tarasina w Kaliszu
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Gdańsk oczami Irlandzkich i Polskich Artystów Plastyków. Krenz J.: Cykl 7 akwarel i pasteli. Zimowy Gdańsk
PublikacjaMiędzynarodowa wystawa zbiorowa, poplenerowa: Gdańsk oczami Irlandzkich i Polskich Artystów Plastyków. Galeria Sztuki Domu Aktora w Gdańsku. Przez kilka grudniowych dni artyści plastycy z Irlandii i Polski malowali zimowy Gdańsk. Stronę irlandzką reprezentowali: Jonathan Brennan, Katherine St.Angelo, Esther O’Kelly, Joanna Mules, Marcus Patton. Polscy uczestnicy: Magdalena Nowacka-Kolano, Anna Schumacher, Krzysztof Ludwin i Komisarz...
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Surface Dielectric Barrier Discharge Plasma Actuators
PublikacjaThis paper presents a part of the works conducted in the Plasmaero European project (task 1.1) on surface dielectric barrier discharge actuators applied to airflow control. The study is divided into several parts. In the first part, the goal is to enhance the electric wind produced by a typical single DBD actuator by optimization of the active electrode shape. For instance, the use of a thin wire instead of a plate air-exposed...
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Trailing-Edge Separation Control of a NACA 0015 Airfoil Using Dielectric-Barrier-Discharge Plasma Actuators
PublikacjaThis paper presents a part of the works conducted in the Plasmaero European project (task 3.1), where the trailing-edge flow separation of a NACA 0015 airfoil has been controlled using four different dielectric barrier discharge (DBD) actuator types at three institutions across Europe. The results show that it is possible to enhance the aerodynamic performance of aircraft at speeds up to 40 m/s. Dielectric-barrier-discharge vortex...
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ESCASA : Analytical estimation of atomic coordinates from coarse‐grained geometry for nuclear‐magnetic‐resonance ‐assisted protein structure modeling. I. Backbone and Hβ protons
PublikacjaA method for the estimation of coordinates of atoms in proteins from coarse-grained geometry by simple analytical formulas (ESCASA), for use in nuclear-magnetic-resonance (NMR) data-assisted coarse-grained simulations of proteins is proposed. In this paper, the formulas for the backbone Hα and amide (HN) protons, and the side-chain Hβ protons, given the Cα-trace, have been derived and parameterized, by using the interproton distances...
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The plasma concentration of advanced oxidation protein products and arterial stiffness in apparently healthy adults
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Blood plasma protein and lipid profile changes in calves during the first week of life
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Characterization of Structural and Energetic Differences between Conformations of the SARS-CoV-2 Spike Protein
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Comparison of protein precipitation methods for various rat brain structures prior to proteomic analysis
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Similarities and Differences in the Protein Composition of Cutaneous Melanoma Cells and Their Exosomes Identified by Mass Spectrometry
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A Data Driven Model for Predicting RNA-Protein Interactions based on Gradient Boosting Machine
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Patients with obstructive sleep apnea present with chronic upregulation of serum HIF-1α protein
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Adipocyte Fatty Acid‐Binding Protein as a Novel Marker of Psoriasis and Clinical Response to Acitretin
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Novel Drying Methods for Sustainable Upcycling of Brewers’ Spent Grains as a Plant Protein Source
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The effect of topical treatment and psoriasis severity on serum retinol-binding protein-4 levels
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Novel thermostable single-stranded DNA-binding protein (SSB) from Deinococcus geothermalis
PublikacjaW celu zbadania właściwości biochemicznych białka wiążącego się do jednoniciowego DNA (SSB) pochodzącego z Deinococcus geothermalis (DgeSSB), sklonowano gen ssb otrzymany w reakcji PCR, a następnie uzyskano wydajną biosyntezę białka DgeSSB. Gen składa się z 900 par zasad, kodujących białko złożone z 300 reszt aminokwasowych, o wyliczonej masie molekularnej równej 32.45 kDa. Sekwencja aminokwasowa wykazuje 43, 44% i 75% identyczności...
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Elastic-contractile model proteins: Physical chemistry, protein function and drug design and delivery
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An analysis and evaluation of the WeFold collaborative for protein structure prediction and its pipelines in CASP11 and CASP12
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MIC1-MAG1-SAG1 chimeric protein, a most effective antigen for detection of human toxoplasmosis
PublikacjaThis study describes a Toxoplasma gondii IgG ELISA test based on a new chimeric antigen containing three immunodominant regions from MIC1, MAG1 and SAG1 proteins of a parasite and shows that this test is useful for diagnostic purposes and may replace the lysed and whole-cell antigens.
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Molecular Simulations of Rhodopsin Tetrameter
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Effect of grain crushing on shear localization in granular bodies during plane strain compression. Int. J. Numerical and Analytical Methods in Geomechanics
PublikacjaArtykuł omawia wpływ miażdżenia ziaren na lokalizacje odkształceń stycznych w materiałach granulowanych podczas ściskania dwuosiowego. Obliczenia MES wykonano przy zastosowaniu mikropolarnego prawa hipoplastycznego uwzględniającego zmianę średniej średnicy ziarna pod wpływem ciśnienia i ścinania. Obliczenia pokazały wpływ miażdżenia ziaren na szerokość lokalizacji.
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Modeling of Cardiac Component of Subarachnoid Space Changes in Apnoea Resulting as a Function of Blood Pressure and Blood Flow Parameters - Two Mechanizm of Regulation
PublikacjaExperiments were performed in a group of 19 healthy, non-smoking volunteers. The experiment consisted of three apnoeas, sequentially: 30 s apnoea, 60 s apnoea and maximal, that could be done, apnoea. The breath-hold was separated for 5 minutes rest. The following parameters were measured and obtained for further analysis: blood parameters, artery diameter of the internal carotid artery, end-tidal CO2 in expired air, the cardiac...
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Gold nanoparticles and their coatings, their effect on cells and their interaction with radiation
PublikacjaTwo nanometre gold nanoparticles (AuNPs), bearing sugar moieties and/or polyethylene glycolamine (PEG-amine), were synthesised and evaluated for their in vitro toxicity and ability to radiosensitise cells with 220 kV and 6 MV X-rays, using four cell lines representing normal and cancerous skin and breast tissues. In addition to the observed intrinsic cancer-selective chemotoxicity, these AuNPs acted as radiosensitisers in combination with...
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The homometallic warwickite V 2 OBO 3
PublikacjaThe synthesis, structure and elementary magnetic characterization of the homometallic warwickite V2OBO3 are reported. The material adopts the orthorhombic warwickite structure type at room temperature, space group Pnma (No. 62) with lattice parameters a = 9.2317(1) Å, b = 3.1172(1) Å, and c = 9.5313(1) Å. Temperature-dependent magnetic susceptibility, electrical resistivity, and specific heat measurements show anomalies near 35 K,...
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GEOINFORMATYCZNE NARZĘDZIE DO BADANIA ZASIĘGU LOKALNYCH STACJI NADAWCZYCH RADIOFONII CYFROWEJ DAB+
PublikacjaKwestia zapewnienia odpowiedniego pokrycia sygnałem multipleksu jest kluczowym aspektem zarówno dla nadawców publicznych jak i prywatnych, a w szczególności lokalnych stacji zainteresowanych procesem cyfryzacji. W pracy przedstawiono geoinformatyczne narzędzie, umożliwiające badanie zasięgu lokalnych stacji nadawczych radiofonii cyfrowej DAB+. Analizę przeprowadzono dla pionierskiej w Polsce stacji LocalDAB we Wrocławiu. Wyniki...
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Modeling sequencing batch reactor operational conditions depending on oxygen concentration
PublikacjaSequencing batch reactors (SBR) can be used as a fill-and draw activated sludge system for wastewater treatment with considerable operating flexibility and the possibility to conduct experiments under standard conditions and extreme case scenarios. Mathematical modeling and computer simulations provide an opportunity to implement existing wastewater processes in modeling software and evaluate different modifications at low costs...
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Antiferromagnetic Order in the Rare-Earth Halide Perovskites CsEuBr3 and CsEuCl3
PublikacjaBulk CsEuBr3 and CsEuCl3 are experimentally shown to be magnetic semiconductors that order antiferromagnetically at Néel temperatures of 2.0 K and 1.0 K, respectively. Given that nanoparticles and thin films of CsEuCl3 have been reported to order ferromagnetically at a similar temperature, our observation of antiferromagnetic ordering in CsEuBr3 and CsEuCl3 expands the possible applications of halide perovskites to now include...
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Sport-related concussion alters cerebral hemodynamic activity during controlled respiration
PublikacjaThis study investigated cerebral hemodynamic activity following sport-related concussion. Prefrontal cortex oxygenation was assessed by near-infrared spectroscopy (NIRS) during a controlled breathing protocol. Wavelet transformation of the NIRS signals showed significant decreases in HbO2 and HbD amplitude at the respiratory frequency interval (0.10–0.6 HZ) from preseason baseline to acute concussion. These results suggest a decreased...
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TiO2 nanotube arrays-based reactor for photocatalytic oxidation of parabens mixtures in ultrapure water: Effects of photocatalyst properties, operational parameters and light source
PublikacjaSelf-organized TiO2 nanotubes as immobilized photocatalysts were evaluated in detail for the photocatalytic degradation of parabens mixtures from ultrapure water. This kind of approach can be a very suitable option for emerging contaminants degradation considering the possibility of the catalyst reuse and recovery which will be simpler than when catalytic powders are used. The anodization method was applied for the TiO2 nanotubes...
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Adaptacyjne metody sterowania układami ze zmiennymi opóźnieniami z zastosowaniem do sterowania jakością w sieciach dystrybucji wody. - J. Tarnawski.
PublikacjaZaprezentowano zintegrowaną hierarchiczną metodę sterowania ilością i jakością w sieciach dystrybucji wody pitnej. W obrębie tej struktury można wydzielić dwie warstwy sterowania - optymalizującą i korekcyjną. Warstwa optymalizująca pracuje repetycyjnie wyznaczając sterowania pompami i zaworami, realizując w ten sposób sterowanie hydrauliką (sterowanie ilością) oraz propozycje sterowania dozowaniem dezynfektanta (sterowanie jakością)...