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Search results for: METAGENOMIC APPROACH
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Metabarcoding and Metagenomics
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The metagenomic approach to characterization of the microbial community shift during the long-term cultivation of anammox-enriched granular sludge
PublicationA metagenomic approach was used to investigate how the microbial community composition changes when an anammox-based granular sludge reactor is seeded with nitritation-anammox biomass from a wastewater treatment plant. In the seed sample, the abundance of Candidatus Kuenenia stuttgartiensis was similar to Candidatus Jettenia caeni (12.63 vs. 11.68%). This biomass was typical in terms of microbial nitrogen conversion; both ammonia...
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Going to extremes – a metagenomic journey into the dark matter of life
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The use of fosmid metagenomic libraries in preliminary screening for various biological activities
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Direct cloning of heavy metal resistance genes from metagenomic DNA
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Identification and molecular modeling of a novel lipase from an Antarctic soil metagenomic library.
PublicationIn this work, we present the construction of a metagenomic library in Escherichia coli using pUC19 vector and environmental DNA directly isolated from Antarctic topsoil and screened for lipolytic enzymes. The screening on agar supplemented with olive oil and rhodamine B revealed one clone with lipolytic activity (Lip1) out of 11,000 E. coli clones. This clone harbored a plasmid, pLip1, which has an insert of 4722 bp that has been...
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The Characteristics of New SSB Proteins from Metagenomic Libraries and Their Use in Biotech Applications
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Social Welfare Interdisciplinary Approach
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Sports Health-A Multidisciplinary Approach
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SKULL BASE-AN INTERDISCIPLINARY APPROACH
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Investigation of interaction between xanthene dye rhodamine B and metagenomic-derivated methylthioadenosine phosphorylase RSFP
PublicationIn the previous study we found that the expression of the metagenomic - derived methylthioadenosine phosphorylase gene (rsfp) in E. coli cells and the presence of rhodamine B in the growth medium were crucial for the pink fluorescence of one E. coli colony from Antarctic soil metagenomic library (Cieśliński et al., 2009). In this study, rsfp gene expression was induced by an arabinose promoter in an LMG194 E. coli strain and the...
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A study on the interaction of rhodamine B with methylthioadenosine phosphorylase protein sourced from an Antarctic soil metagenomic library.
PublicationThe presented study examines the phenomenon of the fluorescence under UV light excitation (312 nm) of E. coli cells expressing a novel metagenomic-derived putative methylthioadenosine phosphorylase gene, called rsfp, grown on LB agar supplemented with a fluorescent dye rhodamine B. For this purpose, an rsfp gene was cloned and expressed in an LMG194 E. coli strain using an arabinose promoter. The resulting RSFP protein was purified...
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An examination of an Antarctic soil metagenomic-derivate putative methylthioadenosine phosphorylase gene as a novel reporter gene for promoter trapping
PublicationThe rsfp gene was discovered during examination ofan Antarctic soil-derived metagenome library and encodesa bacterial methylthioadenosine phosphorylase (GenBank accession number GQ202582). In a previous study, we found that E. coli colonies expressing the rsfp gene reveal strong pink fluorescence after exposure to UV light when grown on culture medium supplemented with rhodamine B (Cieśliński et al., 2009). In contrast to that,...
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International Journal of Psychology: A Biopsychosocial Approach
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Approaches to Aging Control
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Linguistic Approaches to Bilingualism
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International Journal of Information Technologies and Systems Approach
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Increasing conclusiveness of metabonomic studies by cheminformatic preprocessing of capillary electrophoretic data on urinary nucleoside profiles
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Investigation of the C-1311 glucuronidation: an electrochemical approach
Open Research DataThis study was undertaken to investigate the glucuronidation of the compound C-1311 (5-diethylaminoethylamino-8-hydroxyimidazoacridinone – the model anticancer acridine derivative) using electrochemistry/mass spectrometry (EC/MS) as a complementary technique to in vitro (liver microsomes) and in silico approaches.
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Calibration in Metrological Approach
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A process approach to innovation
PublicationOmówiono zarządzanie wiedza zawarta w innowacjach w ujęciu systemowo procesowym.
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Calibration and metrological approach.
PublicationPrzedstawiono teraźniejsze podejście do procesu kalibracji. Różnorodność definicji dotyczących pomiarów w chemii analitycznej, nierzadko niekonsekwentnych, może wprowadzić w zakłopotanie. W pracy wyjaśniono pojęcia takie jak: kalibracja, substancje wykorzystywane do kalibracji, walidacja, niepewność materiałów odniesienia. Omówiono również pojęcie spójności pomiarowej w odniesieniu do procesu kalibracji.
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The OpenMolcas Web: A Community-Driven Approach to Advancing Computational Chemistry
Open Research DataThe developments of the open-source OpenMolcas chemistry software environment since spring 2020 are described, with a focus on novel functionalities accessible in the stable branch of the package or via interfaces with other packages. These developments span a wide range of topics in computational chemistry and are presented in thematic sections: electronic...
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An MTA-phosphorylase gene discovered in the metagenomic library derived from Antarctic top soil during screening for lipolytic active clones confers strong pink fluorescence in the presence of rhodamine B.
PublicationIn this work, we present the construction of a metagenomic library in Escherichiacoli using the pUC19 vector and environmental DNA directly isolated fromAntarctic topsoil and screened for lipolytic enzymes. Unexpectedly, the screeningon agar supplemented with olive oil and rhodamine B revealed one unusual pinkfluorescent clone (PINKuv) out of 85 000 clones. This clone harbored a plasmid,pPINKuv, which has an insert of 8317 bp that...
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System of innovation: a sectoral approach
Publicationthe article presents a systems approach to innovation as an alternative method of assessing the sector innovativeness. in the article the building blocks of each sectoral system of innovations (ssi) such as a knowledge base, institutions and actors are discussed. moreover, the five models of ssi are presented.
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An approach for evaluating trust in it infrastructures
PublicationW artykule zademonstrowano metodę oceny poziomu zaufania do systemu TI w oparciu o podejście funkcji przekonania.
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Contextual approach to reasoning with rules
PublicationIn the paper we present a method of reasoning with Horn rules within a contextual framework. We show that by proper use of a structure of contexts we can obtain partial OWA compliance with no necessity of extending the syntax of underlying Description Logics.
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An approach to smart experience management
PublicationW pracy przedstawiono procesowe podejście do inteligentnego zarządzania wiedzą zebraną na podstawie przebytych doświadczeń.
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An Approach to Trust Case Development
PublicationIn the paper we present an approach to the architectural trust case development for DRIVE, the IT infrastructure supporting the processes of drugs distribution and application. The objectives of DRIVE included safer and cheaper drugs distribution and application. A trust case represents an argument supporting the trustworthiness of the system. It is decomposed into claims that postulate some trust related properties. Claims differ...
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Collaborative approach to trustworthiness of it infrastructures
PublicationArtykuł wprowadza koncepcję ''trust case'' i wyjaśnia jak jest ona używana w celu uzasadnienia zaufania do systemów i infrastruktur IT. W szczególności skoncentrowano się na procesie budowy trust case, wyjasniono jego strukturę oraz podkreślono konieczność włączenia do procesu właściwych udziałowców. Załączono również informację na temat funkcjonalnej struktury narzedzi wspomagających zarządzanie trust case w ramach jego cyklu...
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Psychosis-Psychological Social and Integrative Approaches
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Journal of New Approaches in Educational Research
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International Journal of Feminist Approaches To Bioethics
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Covariance approach to the free photon field
PublicationWprowadziliśmy teorię fotonu poprzez tą samą zasadę, co dla pojedynczej czą-stki w kwantowej mechanice używając C*-algebraicznego podejścia kowariantychukładów.
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Thermodynamical approach to quantifying quantum correlations
PublicationWe consider the amount of work which can be extracted from a heat bath using a bipartite state ρ shared by two parties. In general it is less then the amount of work extractable when one party is in possession of the entire state. We derive bounds for this “work deficit” and calculate it explicitly for a number of different cases. In particuar, for pure states the work deficit is exactly equal to the distillable entanglement of...
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A note on the pseudoinverse approach to estimating ratios.
PublicationArtykuł dotyczy metody porównań parami, stosowanej w metodzie AHP w celu uszeregowania skończonej liczby czynników. Do rozwiązania problemu stosowane są głównie trzy techniki estymacji macierzy ocen za pomocą macierzy ilorazów. Autorzy stosują metodę logarytmicznych najmniejszych kwadratów, ponieważ pozwala na rozwiązanie zagadnienia z brakującymi danymi oraz pokazują pewne wybrane własności rozwiązania. Zamieszczono przykładowe...
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A new approach to the prosthetic finger design
PublicationW pracy zaprezentowano nowy sposób projektowania protez ręki przy użyciu aplikacji CAD. Uzyskano projekt palca wskazującego, w którym zaproponowano napęd poszczególnych członów w oparciu o stopy z pamięcią kształtu.
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Determination of resonances by the optimized spectral approach
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Collaborative approach to WordNet and Wikipedia integration
PublicationIn this article we present a collaborative approach tocreating mappings between WordNet and Wikipedia. Wikipediaarticles have been first matched with WordNet synsets in anautomatic way. Then such associations have been evaluated andcomplemented in a collaborative way using a web application.We describe algorithms used for creating automatic mappingsas well as a system for their collaborative development. Theoutcome enables further...
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Hybrid approach to ontology specification and development
PublicationIn this chapter a first draft of a hybrid ontology development approach is presented. The context of this method encompasses the multi-agent system equipped with knowledge bases and inferring engine. The process of ontology engineering appears as a complex issue, as it addresses different point-views of both, a client and a modeler with a requirements/system analyst. Regarding this, an approach based on the knowledge preprocessing...
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Systemic approach to modelling the human brain
PublicationW prezentacji przedstawia się ogólną koncepcję w pełni autonomicznego systemu decyzyjnego dla robota (awatara, linguabota), zdolnego reagować na bodźce ze środowiska oraz opartego na opracowanym matematycznym modelu psychologii poznawczej człowieka, z elementami psychologii osobowości., uwzględniającymi 'potrzeby', 'emocje', 'nastrój' oraz elementy 'woli'.
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A consensus-based approach to the distributed learning
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Risk Modelling for Passages in Approach Channel
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An agent-based approach to ANN training
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An Approach to RBF Initialization with Feature Selection
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Lexicographic Approach to Health Care Optimization
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Agile Media Management Approach – an analysis
PublicationThis article studies media management and demonstrates a fresh perspective on the new approach based on agile methodologies of project management. The analysis sequentially presents a literature overview of media and its management, the characteristics of media projects, agile project management, an analysis of agile approaches and media management along with the proposal of a...
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Finnish Lexical Homonimics – A Quantitative Approach
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An approach to determining tinnitus acoustical characteristic
PublicationFor many treatment methods, accurate estimation of Tinnitus(ringing in ears) concerning sound type, level, and bandwidth or frequency is inevitable. The proposed way of obtaining Tinnitus parameters is described in this paper. The method employs sound synthesis, aimed at obtaining sound which is closest to perceived Tinnitus. The proposed method assumes running a designed application on a multimedia PC provided with a special graphical...
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Aggregation of imidazoacridinones - spectroscopic and microcalorimetric approach
PublicationImidazoacridinones (IA) belong to a group of polycyclic heteroaromatic antitumor compounds. IA create the aggregated form in water solution. Self-association of substances is a very important phenomenon in many fields of applied chemistry. It is also fundamental model reaction of many kinds of molecular interactions such as the micelle formation of amphiphilic substances and the binding of small organic molecules to macromolecules....