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Application of Aqueous Biphasic Systems Extraction in Various Biomolecules Separation and Purification: Advancements Brought by Quaternary Systems
PublikacjaAqueous biphasic systems (ABS) extraction is a simple, selective, efficient and easy to scale-up technology that, over the years, has attracted a considerable attention from the researcher community as an alternative methodology in downstream processing of a wide variety of biomolecules. This review summarizes and discusses the fundamental features of ABS, as well as its advantages and disadvantages, as a separation and purification...
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Human verbal memory encoding is hierarchically distributed in a continuous processing stream
PublikacjaProcessing of memory is supported by coordinated activity in a network of sensory, association, and motor brain regions. It remains a major challenge to determine where memory is encoded for later retrieval. Here we used direct intracranial brain recordings from epilepsy patients performing free recall tasks to determine the temporal pattern and anatomical distribution of verbal memory encoding across the entire human cortex. High...
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Protein overproduction alters exosome secretion in Chinese hamster ovary cells
PublikacjaDespite the abundance of available cell lines, nearly 70% of all recombinant therapeutic proteins today are produced in Chi-nese hamster ovary (CHO) cells. The impact of protein overproduction on the secretion of exosomes by CHO cells has been investigated here. Increased secretion of extracellular vesicles (EVs) by protein overexpressing CHO cells was demonstrated with protein content assay, nanoparticle tracking analysis, and...
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Outlet Flow Velocity In Circular Culvert
PublikacjaThe outlet flow velocity in the end section of the culvert barrel depends in most cases on the culvert geometry, including the barrel slope, as well as on upstream and downstream channel parameters. Flowing water can create pressure flow or free surface flow in the culvert barrel. In the case of an unsubmerged barrel outlet, the free-surface flow is more frequent than the full flow. Increased velocities can cause channel bed scour...
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Inter Applied Chemistry Programme 6 A practical approach to novel industrial enzymes Dr Natasha Bozic
Kursy OnlineInter Applied Chemistry Programme 6 - A practical approach to novel industrial enzymes Dr Natasha Bozic The purpose of the course is to introduce students to the technologies of industrial enzymes discovery and manufacturing and to provide in depth insight about the advantages of using enzyme preparations in industry. Lectures will cover the common workflows of industrial enzymology including following topics: general enzyme...
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Possibilities of Increasing the Overall Efficiency of Gas-steam CHP Microplant
PublikacjaThe paper presents ways to increase the efficiency of a gas-steam micro power plant by modifying the cycle combination. The modification consists in partial release of the fluid downstream of the gas turbine and using it for ORC fluid overheating and evaporation. Advantages of this solution over the simplest gas and steam cycles’ combination are demonstrated.
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Impact of polder flood plain of the Cisowska Struga on the transformation of flood waves between Gdynia and Rumia
PublikacjaThe paper presents the results of hydraulic calculations (numerical simulations), which were made to investigate the role of floodplain (polder) adjacent to the left bank of Cisowska Struga in Gdynia downstream Hutnicza St. in the process of retention and transformation of flood waves occurring in this river due to torrential rainfall. The paper also addressed the issue of the impact of potential changes in the development of the...
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TspGWI, a thermophilic class-IIS restriction endonuclease from Thermus sp.,recognizes novel asymmetric sequence 5´-ACGGA(N11/9)-3
PublikacjaA novel prototype class-IIS restriction endonuclease, TspGWI, was isolated from the thermophilic bacterium Thermus sp. GW. The recognition sequence and cleavage positions have been established: TspGWI recognizes the non-palindromic 5-bp sequence 5′-ACGGA-3′ and cleaves the DNA 11 and 9 nt downstream in the top and bottom strand, respectively. In addition, an accompanying endonuclease, TspGWII, an isoschizomer of Pst I, was found...
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Electrohydrodynamic secondary flow in the electrostatic precipitator with spiked electrodes
PublikacjaIn this work, the results of electrohydrodynamic (EHD) secondary flow measurements in an electrostatic precipitator (ESP) with one-sidedspike electrodes are presented. The EHD secondary flow was measured for one-sided spike electrodes with the spike tips directed either upstream or downstream the primary flow. The results showed different flow patterns for different spike tips direction in respect to the primary flow direction....
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Freeze-Up Ice Jam Formation in the River Bend, a Case Study on the Inner Mongolia Reach of Yellow River
PublikacjaConcern has been expressed regarding the impacts of climate change on river ice and ice jam formation in cold regions. Ice jams are easily initiated in bends and narrow channels and cause disasters. In this study, observations and remote sensing monitoring are used to study the freeze-up ice jam formation of bends. Sediment transport and freezing process of the river interact, influencing bed changes profile and sedimentary budget....
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Evaluation of solid phase extraction for downstream separation of propane-1,3-diol and butan-1-ol from fermentation broth
PublikacjaGlycerol is mainly a by-product of fat splitting and biodiesel production. This study examined the use of chemically modified silica gels for downstream separation of propane-1,3-diol and butan-1-ol from fermentation broths obtained through the glycerol fermentation process. The developed method was found to be simple and efficient for the isolation and purification of butan-1-ol from the other components in the fermentation mixture....
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Analysis of antibiotic resistance in Escherichia coli isolated from the Reda River and the Oliwski Stream using basic statistical methods = Zastosowanie metod ststystycznych do analizy antybiotykoodporności bakterii wskaźnikowych pochodzących z rzeki Redy i Potoku Oliwskiego
PublikacjaIn this study distribution of antimicrobial resistance patterns among fecal indicator bacteria (Escherichia coli and Enterococcus spp.) was examined in two watercourses. The susceptibility analyses were carried out against the antimicrobial agents, important in treating human E. coli and enterococcal infection. Water samples were obtained from the Oliwski Stream and from the Reda River. On each watercourse the five representative...
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ANALYSIS OF THE IMPACT OF MASS FLOW EXTRACTION ON THE CHANGE OF PARAMETERS IN A LABYRINTH SEAL USING THE STODOLA METHOD
PublikacjaLabyrinth seals are an important element of a steam turbine set design. The use of diagnostic extraction makes it possible to control the operation of a seal by providing information on the thermodynamic parameters along the length of the seal. Diagnostic extraction has a considerable impact on the change of the parameters, the amount of the extracted mass. This article describes the dependence of pressure in the clearance downstream...
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ANALYSIS OF THE IMPACT OF MASS FLOW EXTRACTION ON THE CHANGE OF PARAMETERS IN A LABYRINTH SEAL USING THE STODOLA METHOD
PublikacjaLabyrinth seals are an important element of a steam turbine set design. The use of diagnostic extraction makes it possible to control the operation of a seal by providing information on the thermodynamic parameters along the length of the seal. Diagnostic extraction has a considerable impact on the change of the parameters, the amount of the extracted mass. This article describes the dependence of pressure in the clearance downstream...
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Discussion of “Development of an Accurate Time integration Technique for the Assessment of Q-Based versus h-Based Formulations of the Diffusion Wave Equation for Flow Routing” by K. Hasanvand, M.R. Hashemi and M.J. Abedini
PublikacjaThe discusser read the original with great interest. It seems, however, that some aspects of the original paper need additional comments. The authors of the original paper discuss the accuracy of a numerical solution of the diffusion wave equation formulated with respect to different state variables. The analysis focuses on nonlinear equations in the form of a single transport equation with the discharge Q (volumetric flow rate)...
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Hydro Lubricants: Water-based lubricants for hydropower applications
PublikacjaSeveral different base oil types exist in the market including mineral and synthetic oils (e.g. polyalphaolefins, ester, polyglycol, etc.) and are currently widely in use. Although synthetic oils have drawn great attention over the past few decades in terms of their tribological benefits, mineral oils are still widely used in hydropower applications due primarily to their low cost and easy miscibility with other oils. However,...
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A numerical and experimental analysis of multi-hole orifice in turbulent flow
PublikacjaIn this research study, the comprehensive metrological analysis is investigated for a 4-hole orifice with module m = 0.25 installed in the pipeline with an internal diameter of 50 mm. A detailed numerical simulation was performed for the turbulence models: k-ε-realizable and k-ω-BSL. The novelties of the research include model validation by comparing the results of numerical studies with the experiment conducted in the area of...
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A Numerical Model Study on Grasse River Ice Control Structures
PublikacjaIce jams in the Grasse River have caused the erosion of capping material designed to prevent the resurfacing of the bed sediment in the PCB-contaminated area. Two in-stream ice-control structures are proposed to avoid the jam-induced erosion of the capping material. These two ice-control options are a pier-type ice-control structure and a reconstruction of a small hydropower dam upstream of the capping site. A numerical model study...
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Cross-Lingual Knowledge Distillation via Flow-Based Voice Conversion for Robust Polyglot Text-to-Speech
PublikacjaIn this work, we introduce a framework for cross-lingual speech synthesis, which involves an upstream Voice Conversion (VC) model and a downstream Text-To-Speech (TTS) model. The proposed framework consists of 4 stages. In the first two stages, we use a VC model to convert utterances in the target locale to the voice of the target speaker. In the third stage, the converted data is combined with the linguistic features and durations...
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Electrohydrodynamic Secondary Flow and Particle Collection Efficiency in a One-sided Spike-plate Type Electrostatic Precipitator
PublikacjaIn this work, results of electrohydrodynamic secondary flow and particle collection efficiency measurements in an electrostatic precipitator under positive and negative voltage polarity are presented. The electrostatic precipitator had two plate collecting electrodes and a single spike discharge electrode. The spike tips were only on one side of the discharge electrode, therefore called a one-sided spike electrode. The electrohydrodynamic...
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SUBSOIL CHARACTERISTICS OF THE VISTULA RIVER DIKES
PublikacjaThe results of CPTU tests are used to determine the strength parameters of a dike subsoil. Stress state and stress history of the subsoil under the flood embankment was evaluated with CPTU and DMT tests. Normally consolidated soil was found under the central part of the dike, while the subsoil near the dike toe is found to be overconsolidated. Due to consolidation the undrained shear strength of the subsoil under the central part...
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MP3vec: A Reusable Machine-Constructed Feature Representation for Protein Sequences
Publikacja—Machine Learning (ML) methods have been used with varying degrees of success on protein prediction tasks, with two inherent limitations. First, prediction performance often depends upon the features extracted from the proteins. Second, experimental data may be insufficient to construct reliable ML models. Here we introduce MP3vec, a transferable representation for protein sequences that is designed to be used specifically for sequence-to-sequence...
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Numerical Analysis of an Impact of Planned Location of Sewage Discharge on Natura 2000 Areas – The Dead Vistula Region Case Study
PublikacjaThis article presents results of an analysis of impact of a designed discharge of contaminated water into the Dead Vistula (Wisła Martwa) in the region of the Isthmus (Przesmyk) with the aim of determination of a possible effect of the pollution onto protected areas of Natura 2000 (bird habitats and sites, especially the Bird Paradise – Ptasi Raj) nature reserve. The analysis was conducted on the basis of the two-dimensional modelling...
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Optimized Protocol for RNA Isolation from Penicillium spp. and Aspergillus fumigatus Strains
PublikacjaEfficient RNA isolation from filamentous fungi is crucial for gene expression studies, but it poses significant technical challenges due to the robust cell walls and susceptibility of RNA to degradation by ribonucleases. This study presents the effectiveness of two RNA isolation protocols for four species of filamentous fungi: Penicillium crustosum, Penicillium rubens, Penicillium griseofulvum, and Aspergillus fumigatus. Both protocols...
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Inverse Flood Routing Using Simplified Flow Equations
PublikacjaThe paper considers the problem of inverse flood routing in reservoir operation strategy. The aim of the work is to investigate the possibility of determining the hydrograph at the upstream end based on the hydrograph required at the downstream end using simplified open channel flow models. To accomplish this, the linear kinematic wave equation, the diffusive wave equation and the linear Muskingum equation are considered. To achieve...
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Change in Heavy Metals Concentrations in Sediments Deposited in Retention Tanks in a Stream after a Flood
PublikacjaOur paper presents the results of heavy metal (HM) (Zn, Cu, Pb, Cd) content in bottom sediments from retention tanks along Oliwa Stream in Gdańsk, Poland, before a flood (BF) and after a flood (AF) 14-15 July 2016. The flood had a huge impact on the quality of bottom sediments and their displacement. The concentrations of HM differed significantly for research series conducted 3 months BF and 8 months AF. The concentration of Cu...
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Explainable machine learning for diffraction patterns
PublikacjaSerial crystallography experiments at X-ray free-electron laser facilities produce massive amounts of data but only a fraction of these data are useful for downstream analysis. Thus, it is essential to differentiate between acceptable and unacceptable data, generally known as ‘hit’ and ‘miss’, respectively. Image classification methods from artificial intelligence, or more specifically convolutional neural networks (CNNs), classify...
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Occurrence of antimicrobial resistant bacteria in environment and the statistical analysis of this phenomenon
PublikacjaIntroduction: In this study the occurrence of antimicrobial resistance patterns among fecal indicators (Escherichia coli and Enterococcus spp.) was analyzed in water and wastewater samples. The trends in antimicrobial resistance were analyzed using basic statistical methods. Methods: Samples were obtained from two local watercourses (Oliwski Stream and Reda River) as well as from the wastewater treatment plant (WWTP) Gdansk - Wschod....
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A comparative study of pentanol (C5 alcohol) and kerosene blends in terms of gas turbine engine performance and exhaust gas emission
PublikacjaThe growing demand for sustainable and clean energy sources provides the incentive for the development of alternative fuels. Simultaneously, the development of gas turbine technologies with flexible fuel supply systems enables the use of alternative non-fossil fuels that can play key roles in contributing to global efforts in meeting emissions targets. This paper presents the current state of knowledge on the production and potential...
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Comparative analysis of the flow control over a circular cylinder with detached flexible and rigid splitter plates
PublikacjaA comparative study is performed on a circular cylinder with both flexible and rigid splitter plates (SPs). This study has the novelty of using single and dual detached SPs located downstream of the cylinder. The dimensionless gap distance between the first splitter plate and the cylinder as well as the distance between the SPs are varied. The strain of flexible SPs can be used for energy harvesting from the flow. Therefore, a...
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A High-Arctic flow-through lake system hydrochemical changes: Revvatnet, southwestern Svalbard (years 2010–2018)
PublikacjaLake ecosystems are strongly coupled to features of their surrounding landscapes such as geomorphology, lithology, vegetation and hydrological characteristics. In the 2010–2018 summer seasons, we investigated an Arctic flow-through lake system Revvatnet, located in the vicinity of the coastal zone of Hornsund fjord in Svalbard, characterising its hydrological properties and the chemical composition of its waters. The lake system...
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Machining process sequencing and machine assignment in generative feature-based CAPP for mill-turn parts
PublikacjaProcess selection and sequencing, as one of the most complex issues when evaluated from a mathematical point of view and crucial in CAPP, still attract research attention. For the current trend of intelligent manufacturing, machining features (MFs) are the information carriers for workpiece geometry and topology representation. They are basically derived from CAD models and are used by downstream engineering applications. A feature-based...
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Mathematical Modeling of Ice Dynamics as a Decision Support Tool in River Engineering
PublikacjaThe prediction of winter flooding is a complicated task since it is affected by many meteorological and hydraulic factors. Typically, information on river ice conditions is based on historical observations, which are usually incomplete. Recently, data have been supplemented by information extracted from satellite images. All the above mentioned factors provide a good background of the characteristics of ice processes, but are not...
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Organic carbon fluxes of a glacier surface: a case study of Foxfonna, a small Arctic glacier
PublikacjaArctic glaciers are rapidly responding to global warming by releasing organic carbon (OC) to downstream ecosystems. The glacier surface is arguably the most biologically active and biodiverse glacial habitat and therefore the site of important OC transformation and storage, although rates and magnitudes are poorly constrained. In this paper, we present measurements of OC fluxes associated with atmospheric deposition, ice melt,...
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The effect of groyne field on trapping macroplastic. Preliminary results from laboratory experiments
PublikacjaMacroplastic, a precursor of microplastic pollution, has become a new scope of research interest. However, the physical processes of macroplastic transport and deposition in rivers are poorly understood, which makes the decisions of where to locate macroplastic trapping infrastructure difficult. In this research, we conducted a series of experiments in a laboratory channel, exploring the impact of groynes and flexible artificial...
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Study of Statistical Text Representation Methods for Performance Improvement of a Hierarchical Attention Network
PublikacjaTo effectively process textual data, many approaches have been proposed to create text representations. The transformation of a text into a form of numbers that can be computed using computers is crucial for further applications in downstream tasks such as document classification, document summarization, and so forth. In our work, we study the quality of text representations using statistical methods and compare them to approaches...
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Membrane separation processes for the extraction and purification of steviol glycosides: an overview
PublikacjaSteviol glycosides (SGs), as natural sweeteners from Stevia rebaudiana, are currently employed for replacing sugar and its derivatives in several food products and formulations. Such compounds play an essential role in human health. Their usage provides a positive effect on preventing diseases related to sugar consumption, including diabetes mellitus, cancer, and lipid metabolism disorders. The traditional extraction of SGs is...
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Photogrammetric Development Of The Threshold Water At The Dam On The Vistula River In Wloclawek From Unmanned Aerial Vehicles (Uav)
PublikacjaBarrage in Wloclawek (Poland) was designed by Hydroprojekt and built in the years of 1962 - 1970 as the first stage of the planned Lower Vist ula Cascade. Cascade design assumed the construction of 8 dams in Wyszogr o d, Plock, Wloclawek, Nieszawa (Ciechocinek as an option), Solec Kujawski, Chelmno, Opalen and Tczew. Nieszawa dam was supposed to ensure the maintenance of an adequate free surface...
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Aluminium in glacial meltwater demonstrates an association with nutrient export (Werenskiöldbreen, Svalbard)
PublikacjaThe aluminium (Al) cycle in glacierised basins has not received a great deal of attention in studies of biogeochemical cycles. As Almay be toxic for biota, it is important to investigate the processes leading to its release into the environment. It has not yet been ascertained whether filterable Al (passing through a pore size of 0.45 m) is incorporated into biogeochemical cycles in glacierised basins. Our study aims to determine...
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Novel Tools for Comprehensive Functional Analysis of LDLR (Low-Density Lipoprotein Receptor) Variants
PublikacjaFamilial hypercholesterolemia (FH) is an autosomal-dominant disorder caused mainly by substitutions in the low-density lipoprotein receptor (LDLR) gene, leading to an increased risk of premature cardiovascular diseases. Tremendous advances in sequencing techniques have resulted in the discovery of more than 3000 variants of the LDLR gene, but not all of them are clinically relevant. Therefore, functional studies of selected variants...
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Impact of enhanced pretreatment on biological nutrient removal in municipal wastewater treatment plants
PublikacjaThe aim of this study was to determine the effect of enhanced primary treatment on: increasing primary sludge production for increased biogas production; reducing the organic load on downstream biological treatment processes and thereby reducing energy consumption for aeration; denitrification and enhanced biological phosphorus removal (EBPR) rates in the activated sludge system. For this purpose, three commercial organic polymers...
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Targeting of FLT3-ITD kinase contributes to high selectivity of imidazoacridinone C-1311 against FLT3-activated leukemia cells
PublikacjaDrugs targeting receptor tyrosine kinase FLT3 are of particular interest since activating FLT3-internal tandem duplication (ITD) mutations abundantly occur in fatal acute myeloid leukemias (AMLs). Imidazoacridinone C-1311, a DNA-reactive inhibitor of topoisomerase II, has been previously shown to be a potent and selective inhibitor of recombinant FLT3. Here, we expand those findings by studying its effect on leukemia cells with...
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The antitumor compound triazoloacridinone C-1305 inhibits FLT3 kinase activity and potentiates apoptosis in mutant FLT3-ITD leukemia cells.
PublikacjaAim: FMS-like receptor tyrosine kinase (FLT3) is expressed in some normal hematopoietic cell types and plays an important role in the pathogenesis of acute myeloid leukemia (AML). In this study, we examined the effects of triazoloacridinone C-1305, an antitumor compound, on AML cells with different FLT3 status in vitro. Methods: A panel of human leukemic cell lines with different FLT3 status was used, including FLT3 internal tandem...
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Regulated assembly of lipopolysaccharide and sensing of its alterations in Escherichia coli
PublikacjaThis thesis describes mechanism of the regulation of the transcription of the rpoE gene encoding an essential RNA polymerase subunit in Escherichia coli. The RpoE regulates extracytoplasmic stress response regulon and is required to initiate transcription of genes, whose products are involvedin the folding of periplasmic proteins and synthesis and transport of outer membrane components. The transcriptional regulation of the rpoE...