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Search results for: MATRIX METALLOPROTEINASES
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Reward Learning Requires Activity of Matrix Metalloproteinase-9 in the Central Amygdala
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Matrix Metalloproteinase-9 Is Required for Hippocampal Late-Phase Long-Term Potentiation and Memory
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Poly(amidoamine) dendrimer immunosensor for ultrasensitive gravimetric and electrochemical detection of matrix metalloproteinase-9
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Novel electrogravimetric biosensors for the ultrasensitive detection of plasma matrix metalloproteinase-2 considered a potential tumor biomarker
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Kallikrein-Related Peptidase 14 Activates Zymogens of Membrane Type Matrix Metalloproteinases (MT-MMPs)—A CleavEx Based Analysis
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Matrix metalloproteinase 9 (MMP-9) is indispensable for long term potentiation in the central and basal but not in the lateral nucleus of the amygdala
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Kallikrein-related peptidase 14 activates zymogens of membrane type matrix metalloproteinases (MT-MMPs) - a CleavEx library-based analysis
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The Product of Matrix Metalloproteinase Cleavage of Doxorubicin Conjugate for Anticancer Drug Delivery: Calorimetric, Spectroscopic, and Molecular Dynamics Studies on Peptide–Doxorubicin Binding to DNA
PublicationMatrix metalloproteinases (MMPs) are extracellular matrix degradation factors, promoting cancer progression. Hence, they could provide an enzyme-assisted delivery of doxorubicin (DOX) in cancer treatment. In the current study, the intercalation process of DOX and tetrapeptide-DOX, the product of the MMPs' cleavage of carrier-linked DOX, into dsDNA was investigated using stationary and time-resolved fluorescence spectroscopy, UV-Vis...
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Diagnostic Utility of Selected Matrix Metalloproteinases (MMP-2, MMP-3, MMP-11, MMP-26), HE4, CA125 and ROMA Algorithm in Diagnosis of Ovarian Cancer
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Extracellular matrix metalloproteinase inducer (EMMPRIN) expression correlates positively with active angiogenesis and negatively with basic fibroblast growth factor expression in epithelial ovarian cancer
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JMATRIX - a package for relativistic J-matrix calculations in elastic scattering of electrons from model potentials
PublicationWe present a software package JMATRIX, consisting of two computer codes written in FORTRAN 95 and parallelized with OpenMP, implementing the so-called J-matrix method, applied to elastic scattering of electrons on the radial potential, vanishing faster than Coulomb one. In the J-matrix method, physical scattering problem is replaced by using well-defined model, which is solved analytically. Presented software implements both non-relativistic...
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Enzymatic cleavage of specific dipeptide conjugated with ferrocene as a flexible ultra-sensitive and fast voltammetric assay of matrix metalloproteinase-9 considered a prognostic cancer biomarker in plasma samples
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Preexisting High Expression of Matrix Metalloproteinase-2 in Tunica Media of Saphenous Vein Conduits Is Associated with Unfavorable Long-Term Outcomes after Coronary Artery Bypass Grafting
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The role of selected metalloproteinases in cheiroarthropathy in children with type 1 diabetes - a pilotage study
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Expression of metalloproteinase 2 (MMP-2) and metalloproteinase 9 (MMP-9) in THP-1 macrophages cultured with three-dimensional titanium mini-plate systems used for surgical treatment of condylar fractures
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Tuning matrix-vector multiplication on GPU
PublicationA matrix times vector multiplication (matvec) is a cornerstone operation in iterative methods of solving large sparse systems of equations such as the conjugate gradients method (cg), the minimal residual method (minres), the generalized residual method (gmres) and exerts an influence on overall performance of those methods. An implementation of matvec is particularly demanding when one executes computations on a GPU (Graphics...
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Finite element matrix generation on a GPU
PublicationThis paper presents an efficient technique for fast generation of sparse systems of linear equations arising in computational electromagnetics in a finite element method using higher order elements. The proposed approach employs a graphics processing unit (GPU) for both numerical integration and matrix assembly. The performance results obtained on a test platform consisting of a Fermi GPU (1x Tesla C2075) and a CPU (2x twelve-core...
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Systems of differential equations with a singular matrix
PublicationPraca dotyczy układów równań różniczkowych z macierzą osobliwą. Szczególnymi przypadkami takich układów są równania różniczkowo-algebraiczne. Korzystając z odpowiedniej nierówności różniczkowej dla układów równań i metody quasi linearyzacji pokazano, iż odpowiednie monotoniczne ciągi są zbieżne do rozwiązania naszego problemu i jest to zbieżność kwadratowa. O funkcji f występującej po prawej stronie zagadnienia zakładano...
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Connection matrix theory for discrete dynamical systems
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Advanced Macromodel Matrix Structure Cloning for FDTD
PublicationWe propose an improved macromodel-based techniquefor efficient analysis of the structures based on PhotonicCrystals (PhC). The technique involves a new structure of thecoupling matrix and advanced cloning of not only the macromodel matrices, but also the coupling matrices SE and SH.The method allows one to shorten considerably the preprocessingtime, the RAM usage and also the iterating speed of performingFDTD. With this...
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Dipole matrix for the 2D inclusions close to circular
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Connection matrix theory for discrete dynamical systems
PublicationIn [C] and [F1] the connection matrix theory for Morse decomposition is developedin the case of continuous dynamical systems. Our purpose is to study the case of discrete timedynamical systems.
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Production of gaseous matrix-free reference materials
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Application of the J-matrix method to multichannel scattering
PublicationIn this contribution we describe the multichannel extension to the nonrelativistic J-matrix method, and present differential cross sections for scattering of slow electrons from Argon atoms. Nonrelativistic phase shifts, then the S-matrix and the cross sections have been calculated using newly developed Fortran code, JMATRIX-MULTI.We applied the model Hartree-Fock potential as the scattering potential, which was truncated in the...
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Coupled inductors based filter for matrix converters
PublicationThe use of the coupled inductors in the multipulse matrix converter (MC) systems is described in the paper. The possible arrangements of the system are given together with the description of their operation parameters. Moreover, the influence of the system’s topology on the output power quality is also presented. The invented converter structures evaluation results are given in the form of simulation tests acquired output waveforms...
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Implementation of matrix-type FDTD algorithm on a graphics accelerator
PublicationArtykuł prezetuje implementację algorytmu FDTD w postaci macierzowej przeznaczonej dla kart graficznych. Wykazany został wzrost efektywności obliczeń numerycznych w odniesieniu do implementacji przeznaczonej dla procesora komputerowego.
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Production of new non-matrix reference material of ethene
PublicationThe main objective of the research is to produce new non-matrix reference materials of ethene. The study are based on thermal decomposition of surface compound chemically bonded with the surface of glass fibers coated with thin layer of aluminum. Positivehomogeneity test, stability test and organization of inter-laboratory comparison are leading to find new non-matrix reference materials which are indispensable tools in the analysis...
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Gas sampling system for matrix of semiconductor gas sensors
PublicationSemiconductor gas sensors are popular commercial sensors applied in numerous gas detection systems. They are reliable, small, rugged and inexpensive. However, there are a few problem limiting the wider use of such sensors. Semiconductor gas sensor usually exhibits a low selectivity, low repeatability, drift of response, strong temperature and moisture influence on sensor properties. Sample flow rate is one of the parameters that...
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Matrix representation of the ARMA(p, q) process spectrum
PublicationPraca dotyczy szeregów czasowych i ich modelowania scałkowanymi procesami autoregresji i średniej ruchomej ARIMA(p,q). Dla dowolnych parametru modelu p i q, zaproponowano opis spektrum wykorzystując zapis macierzowy. Takie podejście pozwoliło na znaczne uproszczenia przy różnego rodzaju wyprowadzeniach, a w efekcie i obliczeniach.
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Differential equations with a singular matrix and convergence of approximate solutions
PublicationZastosowano metodę kwazilinearyzacji dla równań różniczkowych z macierzą osobliwą aby pokazać, że odpowiednie ciągi rozwiązań przybliżonych są kwadratowo zbieżne do rozwiązania naszego problemu.Metodę tę zastosowano do układów takich równań różniczkowych.
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FAST Matrix: depicting the time-related aspect of urban development
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Investigation of matrix-free generation of methyl chloride as a reference material
PublicationW pracy opisano badania nad wykorzystaniem włókien szklanych do otrzymywania bezmatrycowych materiałów odniesienia zawierających chlorek metylu. Chlorek metylu jest uzyskiwany w wyniku termicznego rozkładu związku powierzchniowego. Przedstawiono wyniki badań dla trzech różnych włókien szklanych (o różnej grubości), pokrytych warstwą glinu.
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A memory efficient and fast sparse matrix vector product on a Gpu
PublicationThis paper proposes a new sparse matrix storage format which allows an efficient implementation of a sparse matrix vector product on a Fermi Graphics Processing Unit (GPU). Unlike previous formats it has both low memory footprint and good throughput. The new format, which we call Sliced ELLR-T has been designed specifically for accelerating the iterative solution of a large sparse and complex-valued system of linear equations arising...
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Multimodal coupling matrix for an array of rectangular slots on conducting cylinder
PublicationArtykuł prezentuje metodę wyznaczania sprzężeń wzajemnych pomiędzy aperturami promieniującymi położonymi na przewodzącym cylindrze. Pokazano sposób wyznaczania wielorodzajowej macierzy rozproszenia reprezentującej sprzężenia własne i wzajemne w badanej strukturze.
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Evaluation of recycled tyre steel fibres adhesion to cement matrix
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Distributed NVRAM Cache – Optimization and Evaluation with Power of Adjacency Matrix
PublicationIn this paper we build on our previously proposed MPI I/O NVRAM distributed cache for high performance computing. In each cluster node it incorporates NVRAMs which are used as an intermediate cache layer between an application and a file for fast read/write operations supported through wrappers of MPI I/O functions. In this paper we propose optimizations of the solution including handling of write requests with a synchronous mode,...
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LOW COST MEASUREMENT MODULE FOR MATRIX OF AMPEROMETRIC GAS SENSOR
PublicationThis paper describes an amperometric sensor module for gas concentration measurement. A module can be used for many types of electrochemical gas sensors without major hardware changes. Device is based on AVR ATmega8 microcontroller. As signal processing circuit a specialized integrated circuit LMP9l000 configurable via I2C interface is used. The concept of a measuring system composed of several modules dedicated for a gas sensors...
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OpenGL accelerated method of the material matrix generation for FDTD simulations
PublicationThis paper presents the accelerated technique of the material matrix generation from CAD models utilized by the finite-difference time-domain (FDTD) simulators. To achieve high performance of these computations, the parallel-processing power of a graphics processing unit was employed with the use of the OpenGL library. The method was integrated with the developed FDTD solver, providing approximately five-fold speedup of the material...
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A framework for risk matrix design: A case of MASS navigation risk
PublicationRisk matrix, a tool for visualizing risk assessment results, is essential to facilitate the risk communication and risk management in risk-based decision-making processes related to new and unexplored socio-technical systems. The use of an appropriate risk matrix is discussed in the literature, but it is overlooked for emerging technologies such as Maritime Autonomous Surface Ships (MASS). In this study, a comprehensive framework...
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FPGA Acceleration of Matrix-Assembly Phase of RWG-Based MoM
PublicationIn this letter, the field-programmable-gate-array accelerated implementation of matrix-assembly phase of the method of moments (MoM) is presented. The solution is based on a discretization of the frequency-domain mixed potential integral equation using the Rao-Wilton-Glisson basis functions and their extension to wire-to-surface junctions. To take advantage of the given hardware resources (i.e., Xilinx Alveo U200 accelerator card),...
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Inner derivations of special subrings of matrix rings and outerplanar digraphs.
PublicationTematem artykułu jest specjalny podpierścień pierścienia macierzy wyznaczony przez relację oraz digraf reprezentujący tę relację. Rozważane są takie relacje, dla których reprezentujące je digrafy są zewnętrznie planarne. W tym przypadku zostały udowodnione warunki konieczne i wystarczające na to, aby różniczkowanie pierścienia było wewnętrzne.
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General quasilinearization method for systems of differential equations with a singular matrix
PublicationStosując metodę kwazilinearyzacji badano problem rozwiązań przybliżonych dla układów równań różniczkowych z macierzą osobliwą. Pokazano zbieżność kwadratową odpowiednich ciągów monotonicznych.
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Changes in Gene and Protein Expression of Metalloproteinase-2 and -9 and Their Inhibitors TIMP2 and TIMP3 in Different Parts of Fluoride-Exposed Rat Brain
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Production of gaseous matrix-free reference materials. Application of thermoanalytical techniques
PublicationMateriały odniesienia są wykorzystywane w każdym laboratorium w celu zapewnienia jakości wyników pomiarów analitycznych. Produkcja materiałów odniesienia nie jest zadaniem łatwym, szczególnie w przypadku składników gazowych, toksycznych i o nieprzyjemnym zapachu. Termiczny rozkład związków powierzchniowych jest bardzo dogodnym sposobem sporządzania właśnie tego rodzaju mieszanin. Ważną rolę w procesie termicznego rozkładu związków...
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Trial Proteomic Qualitative and Quantitative Analysis of the Protein Matrix of Submandibular Sialoliths
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Metal heksacyanoferrate network synthesized inside polymer matrix for electrochemical capacitors
PublicationPrzedmiotem publikacji jest charakterystyka elektrochemiczna polimeru przewodzącego (poli(3,4-etylenodioksytiofenu)) modyfikowanego błękitem pruskim oraz jego pochodnymi, pochodną kobaltową oraz pochodną niklową. Materiały są stabilne elektrochemicznie, a uzyskane wartości pojemności elektrycznej pozwalają na wykorzystanie ich przy konstrukcji kondensatorów elektrochemicznych.
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Novel investigation of pyrolysis mechanisms and kinetics for functional groups in biomass matrix
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Non-matrix reference materials-the challenges in the preparation of standard gas mixtures
PublicationIn the last few years particularly great pressure is exerted on quality control and assurance of analytical measurement results. An invaluable role in this process is played by reference materials. The paper presents the characteristics of basic types of reference materials, with particular attention to gaseous reference materials.
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Coupled-resonator filters with frequency-dependent couplings: coupling matrix synthesis
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Non-matrix reference matrials- chalanges in the preparation of standard gas mixtures
PublicationIn the last few years particularly great pressure is exerted on quality control and assurance of analytical measurement results. An invaluable role in this process is played by reference materials. The paper presents the characteristics of basic types of reference materials, with particular attention to gaseous reference materials. In addition, a review of literature on techniques of preparation of gaseous standard materials, published...