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Search results for: EXOG
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An integrated DNA and RNA variant detector identifies a highly conserved three base exon in the MAP4K5 kinase locus
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Gene Expression and Activity Profiling Reveal a Significant Contribution of Exo‐Phosphotransferases to the Extracellular Nucleotides Metabolism in HUVEC Endothelial Cells
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Dni informacyjne – Fundusze norweskie i EOG
EventsCelem spotkania jest przekazanie uczestnikom informacji dotyczących najbliższych konkursów organizowanych przez NCBiR i finansowanych w ramach funduszy norweskich i EOG. Organizator – NCBiR.
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Białka prokariotycznego systemu MMR: rola oraz interakcje
PublicationUszkodzenia komórkowego DNA w postaci błędnie sparowanych lub niesparowanych zasad azotowych są wynikiem niewłaściwie zachodzących procesów metabolizmu DNA, takich jak replikacja, rekombinacja oraz naprawa DNA. Utrwalenie tego rodzaju zmian prowadzi do powstania mutacji. System MMR (ang. DNA mismatch repair) usuwa te uszkodzenia przyczyniając się do zwiększenia wierności replikacji DNA oraz utrzymania stabilności genomu komórki....
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Unraveling the Interplay between DNA and Proteins: A Computational Exploration of Sequence and Structure-Specific Recognition Mechanisms
PublicationMy PhD dissertation focused on DNA-protein interactions and the recognition of specific DNA sequences and structures. I discovered that acidic amino acid residues (Asp/Glu) play a crucial role by exhibiting a preference for cytosine. Their contribution to binding affinity depends on nearby cytosines, balancing electrostatic repulsion with specific interactions. Acidic residues act as negative selectors, discouraging non-cytosine...
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Visually validated semi-automatic high-frequency oscillation detection aides the delineation of epileptogenic regions during intra-operative electrocorticography
PublicationOBJECTIVE: To test the utility of a novel semi-automated method for detecting, validating, and quantifying high-frequency oscillations (HFOs): ripples (80-200 Hz) and fast ripples (200-600 Hz) in intra-operative electrocorticography (ECoG) recordings. METHODS: Sixteen adult patients with temporal lobe epilepsy (TLE) had intra-operative ECoG recordings at the time of resection. The computer-annotated ECoG recordings were visually...
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Genetic features of clinical Pseudomonas aeruginosa strains
PublicationW grupie 62 izolatów klinicznych sprawdzono obecność 6 wybranych czynnikow wirulencji. We wcześniejszych badaniach z wykorzystaniem techniki ERIC - PCR wykazano, że w analizowanej grupie 49 (79%) to szczepy, o dużum podobieństwie genetycznym (ponad 62%), każdy z pozostałych 13 izolatów zaliczono do osobnego genotypu, o zdecydownie niższym stopniu pokrewieństwa. W przypadku wszystkich 49 szczepów z pierwszej grupy stwierdzono obecność...
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Silver nanoparticles induce premutagenic DNA oxidation that can be prevented by phytochemicals from Gentiana asclepiadea
PublicationAmong nanomaterials, silver nanoparticles (AgNPs) have the broadest and most commercial applications due to their antibacterial properties, highlighting the need for exploring their potential toxicity and underlying mechanisms of action. Our main aim was to investigate whether AgNPs exert toxicity by inducing oxidative damage to DNA in human kidney HEK 293 cells. In addition, we tested whether this damage could be counteracted...
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Brain-computer interaction based on EEG signal and gaze-tracking information = Analiza interackji mózg-komputer wykorzystująca sygnał EEg i informacje z systemu śledzenia punktu fiksacji wzroku
PublicationThe article presents an attempt to integrate EEG signal analysis with information about human visual activities, i.e. gaze fixation point. The results from gaze-tracking-based measurement were combined with the standard EEG analysis. A search for correlation between the brain activity and the region of the screen observed by the user was performed. The preliminary stage of the study consists in electrooculography (EOG) signal processing....
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The crystal structure of (1RS,4RS,5RS,6SR)-5-cyano-5-nitro-6-phenyl-bicyclo[2.2.1]hept-2-ene
PublicationStructure of nitronorbornene derivative C14H12N2O2 synthesized in the reaction of cyclopentadiene with E-2-phenyl-1-cyano-1-nitroethene was determined by single crystal X-ray diffraction analysis. It was found that in analyzed molecule the nitro group is in endo-position whereas phenyl group have exo-ori-entation.
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Wdrożenie projektu Quo Vadis, Gdańsku? Mieszkañcy planują swoje miasto
Publicationrozdział zawiera szczegółowy opis wdrożenia projektu badawczo-wdrożeniowego "Quo Vadis Gdańsku? mieszkańcy planują swoje miasto" zrealizowanego w latach 2014-2015 w ramach programu „Obywatele dla Demokracji”, finansowanego z funduszy EOG we współpracy Gdańskiej Fundacji Innowacji Społecznej, Wydziału Architektury Politechniki Gdańskiej oraz Sopockiej Szkoły Wyższej
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Organizacja procesu rewitalizacji z użyciem metody Placemakingu na przykładzie projektu społecznej rewitalizacji Parku Świętopełka w Gdańsku
PublicationNiniejszy artykuł służy prezentacji przebiegu oraz wniosków wyciągniętych z realizacji projektu badawczo-wdrożeniowego: Społeczna rewitalizacja przestrzeni z wykorzystaniem strategii Placemakingu. Projekt realizowany był w 2015 roku przez Stowarzyszenie Inicjatywa Miasto w ramach programu Obywatele dla Demokracji, finansowanego z Funduszy EOG. Realizację projektu poprzedzały działania inicjujące, trwające od 2013 roku.
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Semicrystalline Polyesters Based on a Novel Renewable Building Block
PublicationIsohexides, like e.g. isosorbide, are well-known carbohydrate-based rigid diols which are capable of dramatically increasing the glass transition temperature of polyesters. However, their relatively low reactivity has thus far hampered large-scale industrial applications in the polymer field. Recently, with the aim to increase reactivity while at the same time retain rigidity, we have developed a new isoidide dicarboxylic acid...
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Manganese(III) Promoted Cyclization of N-alkenyl-N-(2-hydroxyethyl) amides to Iso-Oxacepham Potent β-Lactamase Inhibitors
PublicationBackground: β-Lactams are still a subject of interest of organic chemists. The main reason for this interest is due to their application as a chemotherapeutic. β-Lactam antibiotics are still the most commonly used drugs in bacterial infections. Method: Methods using 4-exo-trig radical cyclization leading to β-lactams are an alternative to classical Staudinger`s β-Lactams formation. We prepared N-alkenyl-N-(2-hydroxyethyl)amides...
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MUTL PROTEIN AS A COMMON CONSTITUENT OF VSP, BER, NER AND MMR REPAIR SYSTEMS
PublicationMutS and MutL proteins are renowned mostly for their functions in well-characterized, post-DNA replication mismatch repair system (MMR). However, there is growing evidence that MMR system is not the only field of action of these proteins. Moreover, involvement in MMR does not even have to be their primary function. There are some reports indicating involvement of MutL in BER, NER and VSP (very short patch repair). MutL protein...
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MutL protein as a constituent of vsp, ner and mmr repair systems
PublicationMutS and MutL proteins are renowned mostly for their functions in well-characterized, post-DNA replication mis- match repair system (MMR). However, there is growing evidence that MMR system is not the only field of action for these pro- teins. Moreover, the participation in MMR does not even have to be their primary function. There are some reports indicat- ing involvement of MutL in BER, NER and VSP (very short patch repair)....
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Justyna Martyniuk-Pęczek dr hab. inż. arch.
PeopleJustyna Martyniuk-Peczek, Ph.D., D.Sc. Associate Professor Department of Urban Design and Regional Planning, Faculty of Architecture Gdansk University of Technology My academic and research activity has been concentrated around one specialty — urban planning, however it involves an interdisciplinary reference to other fields, such as lighting and the science of management. In terms of quantity, my academic work...
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Anna Wendt mgr
PeopleAsystent w Katedrze Inżynierii Zarządzania i Jakości od 2017 r. Jest absolwentką kierunku Zarządzanie jakością i środowiskiem na Wydziale Zarządzania Uniwersytetu Gdańskiego. W trakcie studiów doktoranckich na Wydziale Zarządzania i Ekonomii Politechniki Gdańskiej w dyscyplinie Nauki o Zarządzaniu. Jest audytorem wewnętrznym systemów ISO 9001, 14001, 18001 oraz 22000. Ukończyła wiele kursów z zakresu zarządzania jakością i...
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Special techniques and future perspectives: Simultaneous macro- and micro-electrode recordings
PublicationThere are many approaches to studying the inner workings of the brain and its highly interconnected circuits. One can look at the global activity in different brain structures using non-invasive technologies like positron emission tomography (PET) or functional magnetic resonance imaging (fMRI), which measure physiological changes, e.g. in the glucose uptake or blood flow. These can be very effectively used to localize active patches...
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Ekspertyza(2)
PublicationEkspertyza dotycząca odrzucenia odwołania złożonego przez firmę MLU Sp. z o.o. z siedzibą w Katowicach, ul. Połomińska 16 40-585 Katowice w Krajowej Izbie Odwoławczej przy Prezesie Urzędu Zamówień Publicznych, ul. Postępu 17a 02-676 Warszawa, wobec treści ogłoszenia o zamówieniu opublikowanym dnia 8 maja 2013r. w Dzienniku Urzędowym Unii Europejskiej pod numerem 151218-2013, dotyczącym postępowania o udzielenie zamówienia publicznego...
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Employing a biofeedback method based on hemispheric synchronization in effective learning
PublicationIn this paper an approach to build a brain computer-based hemispheric synchronization system is presented. The concept utilizes the wireless EEG signal registration and acquisition as well as advanced pre-processing methods. The influence of various filtration techniques of EOG artifacts on brain state recognition is examined. The emphasis is put on brain state recognition using band pass filtration for separation of individual...
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DNA methylation as a mediator of HLA-DRB1*15:01 and a protective variant in multiple sclerosis
PublicationThe human leukocyte antigen (HLA) haplotype DRB1*15:01 is the major risk factor for multiple sclerosis (MS). Here, we find that DRB1*15:01 is hypomethylated and predominantly expressed in monocytes among carriers of DRB1*15:01. A differentially methylated region (DMR) encompassing HLA-DRB1 exon 2 is particularly affected and displays methylation-sensitive regulatory properties in vitro. Causal inference and Mendelian randomization...
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CERVIX UTERI, Endocervix - Female, 49 - Tissue image [10080730015776761]
Open Research DataThis is the histopathological image of CERVIX UTERI tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format.
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Reactions of the Lithiated DiphosphinetBu2P-P(SiMe3)Li with [(η6-C6H6)RuCl2]2in the Presence of Tertiary Phosphines
PublicationtBu2P–P(SiMe3)Li reacted with [(η6-C6H6)RuCl2]2at–40 °C in the presence of PR3(PR3=PEt3,PEt2Ph, PEtPh2) by the nucleophilic addition of the tBu2P–P(SiMe3) moiety to the benzene ring to yield solely the complexes [(R3P)2Ru(Cl)-{η5-C6H6(Me3SiP–PtBu2)}] (1). These products decomposed slowly at ambient temperature to yield benzene, Ru clusters, and small amounts of the dinuclear ruthenium complexes [{(R3P)2Ru}2(μ,η2:2-P2)2Ru(PR3)2](Ru–Ru)(6)....
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Sex contribution to average age at onset of Huntington's disease depends on the number of (CAG)n repeats
PublicationHuntington’s disease (HD) is a hereditary neurodegenerative disorder caused by the extension of the CAG repeats in exon 1 of the HTT gene and is transmitted in a dominant manner. The present study aimed to assess whether patients’ sex, in the context of mutated and normal allele length, contributes to age on onset (AO) of HD. The study population comprised a large cohort of 3723 HD patients from the European Huntington’s Disease...
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CERVIX UTERI, Exocervix - Female, 66 - Tissue image [9020730024817441]
Open Research DataThis is the histopathological image of CERVIX UTERI tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format.
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Konferencja „Biznes i uczelnia w dążeniu do jakości"
EventsZapraszamy na konferencję „Biznes i uczelnia w dążeniu do jakości”, której częścią będzie panel dyskusyjny pt. „Kierunki współpracy biznesu i uczelni w zakresie doskonalenia jakości”.
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The newest researches and applications of treatment wetlands in sewage sludge management
PublicationIn the paper the newest researches and applications of treatment wetlands conducted by re-searchers of Civil and Environmental Faculty are presented. Among others it was proved that this technology could be successfully implemented for highly polluted wastewater treatment. Within the research project two multistage treatment wetlands, one for landfill leachate and the second for reject water from digested sewage sludge centrifugation,...
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Invasive electrophysiological patient recordings from the human brain during memory tasks with pupilometry (MC_004)
Open Research DataData comprise intracranial EEG (iEEG) brain activity, including electrocorticography (ECoG) signals, recorded from over 100 electrodes implanted in one patient throughout various brain regions. These iEEG signals were recorded in epilepsy patients undergoing invasive monitoring and localization of seizures when they were performing a battery of four...
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Invasive electrophysiological patient recordings from the human brain during memory tasks with pupilometry (MC_005)
Open Research DataData comprise intracranial EEG (iEEG) brain activity, including electrocorticography (ECoG) signals, recorded from over 100 electrodes implanted in one patient throughout various brain regions. These iEEG signals were recorded in epilepsy patients undergoing invasive monitoring and localization of seizures when they were performing a battery of four...
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Invasive electrophysiological patient recordings from the human brain during memory tasks with pupilometry (MC_0010)
Open Research DataData comprise intracranial EEG (iEEG) brain activity, including electrocorticography (ECoG) signals, recorded from over 100 electrodes implanted in one patient throughout various brain regions. These iEEG signals were recorded in epilepsy patients undergoing invasive monitoring and localization of seizures when they were performing a battery of four...
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Invasive electrophysiological patient recordings from the human brain during memory tasks with pupilometry (MC_002)
Open Research DataData comprise intracranial EEG (iEEG) brain activity, including electrocorticography (ECoG) signals, recorded from over 100 electrodes implanted in one patient throughout various brain regions. These iEEG signals were recorded in epilepsy patients undergoing invasive monitoring and localization of seizures when they were performing a battery of four...
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Invasive electrophysiological patient recordings from the human brain during memory tasks with pupilometry (MC_0012)
Open Research DataData comprise intracranial EEG (iEEG) brain activity, including electrocorticography (ECoG) signals, recorded from over 100 electrodes implanted in one patient throughout various brain regions. These iEEG signals were recorded in epilepsy patients undergoing invasive monitoring and localization of seizures when they were performing a battery of four...
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Invasive electrophysiological patient recordings from the human brain during memory tasks with pupilometry (MC_008)
Open Research DataData comprise intracranial EEG (iEEG) brain activity, including electrocorticography (ECoG) signals, recorded from over 100 electrodes implanted in one patient throughout various brain regions. These iEEG signals were recorded in epilepsy patients undergoing invasive monitoring and localization of seizures when they were performing a battery of four...
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Invasive electrophysiological patient recordings from the human brain during memory tasks with pupilometry (MC_003)
Open Research DataData comprise intracranial EEG (iEEG) brain activity, including electrocorticography (ECoG) signals, recorded from over 100 electrodes implanted in one patient throughout various brain regions. These iEEG signals were recorded in epilepsy patients undergoing invasive monitoring and localization of seizures when they were performing a battery of four...
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Invasive electrophysiological patient recordings from the human brain during memory tasks with pupilometry (MC_007)
Open Research DataData comprise intracranial EEG (iEEG) brain activity, including electrocorticography (ECoG) signals, recorded from over 100 electrodes implanted in one patient throughout various brain regions. These iEEG signals were recorded in epilepsy patients undergoing invasive monitoring and localization of seizures when they were performing a battery of four...
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Invasive electrophysiological patient recordings from the human brain during memory tasks with pupilometry (MC_006)
Open Research DataData comprise intracranial EEG (iEEG) brain activity, including electrocorticography (ECoG) signals, recorded from over 100 electrodes implanted in one patient throughout various brain regions. These iEEG signals were recorded in epilepsy patients undergoing invasive monitoring and localization of seizures when they were performing a battery of four...
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Invasive electrophysiological patient recordings from the human brain during memory tasks with pupilometry (MC_0011)
Open Research DataData comprise intracranial EEG (iEEG) brain activity, including electrocorticography (ECoG) signals, recorded from over 100 electrodes implanted in one patient throughout various brain regions. These iEEG signals were recorded in epilepsy patients undergoing invasive monitoring and localization of seizures when they were performing a battery of four...
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Invasive electrophysiological patient recordings from the human brain during memory tasks with pupilometry (MC_009)
Open Research DataData comprise intracranial EEG (iEEG) brain activity, including electrocorticography (ECoG) signals, recorded from over 100 electrodes implanted in one patient throughout various brain regions. These iEEG signals were recorded in epilepsy patients undergoing invasive monitoring and localization of seizures when they were performing a battery of four...
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Invasive electrophysiological patient recordings from the human brain during memory tasks with pupilometry (MC_0017)
Open Research DataData comprise intracranial EEG (iEEG) brain activity, including electrocorticography (ECoG) signals, recorded from over 100 electrodes implanted in one patient throughout various brain regions. These iEEG signals were recorded in epilepsy patients undergoing invasive monitoring and localization of seizures when they were performing a battery of four...
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Invasive electrophysiological patient recordings from the human brain during memory tasks with pupilometry (MC_0021)
Open Research DataData comprise intracranial EEG (iEEG) brain activity, including electrocorticography (ECoG) signals, recorded from over 100 electrodes implanted in one patient throughout various brain regions. These iEEG signals were recorded in epilepsy patients undergoing invasive monitoring and localization of seizures when they were performing a battery of four...
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Invasive electrophysiological patient recordings from the human brain during memory tasks with pupilometry (MC_0020)
Open Research DataData comprise intracranial EEG (iEEG) brain activity, including electrocorticography (ECoG) signals, recorded from over 100 electrodes implanted in one patient throughout various brain regions. These iEEG signals were recorded in epilepsy patients undergoing invasive monitoring and localization of seizures when they were performing a battery of four...
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Invasive electrophysiological patient recordings from the human brain during memory tasks with pupilometry (MC_0019)
Open Research DataData comprise intracranial EEG (iEEG) brain activity, including electrocorticography (ECoG) signals, recorded from over 100 electrodes implanted in one patient throughout various brain regions. These iEEG signals were recorded in epilepsy patients undergoing invasive monitoring and localization of seizures when they were performing a battery of four...
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Invasive electrophysiological patient recordings from the human brain during memory tasks with pupilometry (MC_0024)
Open Research DataData comprise intracranial EEG (iEEG) brain activity, including electrocorticography (ECoG) signals, recorded from over 100 electrodes implanted in one patient throughout various brain regions. These iEEG signals were recorded in epilepsy patients undergoing invasive monitoring and localization of seizures when they were performing a battery of four...
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Invasive electrophysiological patient recordings from the human brain during memory tasks with pupilometry (MC_0023)
Open Research DataData comprise intracranial EEG (iEEG) brain activity, including electrocorticography (ECoG) signals, recorded from over 100 electrodes implanted in one patient throughout various brain regions. These iEEG signals were recorded in epilepsy patients undergoing invasive monitoring and localization of seizures when they were performing a battery of four...
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"Biznes i uczelnia w dążeniu do jakości" - Edukacja dla doskonalenia jakości Edu4QI
EventsWydział Zarządzania i Ekonomii Politechniki Gdańskiej, firma Flex oraz Fundacja Edukacyjne Centrum Doskonalenia zapraszają na konferencję „Biznes i uczelnia w dążeniu do jakości – Edukacja dla doskonalenia jakości Edu4QI”, której częścią będzie panel dyskusyjny pt. „Kierunki współpracy biznesu i uczelni w zakresie doskonalenia jakości”. Celem...
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Przestrzeń publiczna dzielnicy w partycypacyjnym planowaniu strategicznym Quo vadis, Gdańsku? Mieszkańcy planują swoje miasto
PublicationMENTORING URBANISTYCZNY I MIKROSTRATEGIA jako innowacyjne narzędzia w procesie partycypacji społecznej Rosnąca wola włączenia się mieszkańców w proces planowania i współdecydowania o przyszłości miasta wymaga dziś w Polsce nowej formuły planowania partycypacyjnego. Rady dzielnic, stowarzyszenia, grupy inicjatywne poszukują metod pracy w bardziej efektywny sposób integrujących i aktywizujących społeczeństwo dzielnicy wokół wspólnych...