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Search results for: MRI IMAGES BINARIZATION
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Registration and normalization of MRI/PET images
PublicationW artykule przedstawiono technikę rejestracji i normalizacji obrazów MRI/PET. Zawiera on porównanie sztywnej i elastycznej transformacji gemotrycznej. Porownano w nim rowniez manualne i proponowane automatyczne podejscie do problemu rejestracji i normalizacji obrazow.
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Automatic synthesis of parametric images in dynamic MRI imaging
PublicationArtykuł opisuje automatyczne metody czasu dojścia kontrastu (BAT) i tętniczą funkcję wejścia (AIF). Metody te porównano dla klinicznych i symulacyjnych danych.
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MRI-Derived Subcutaneous and Visceral Adipose Tissue Reference Values for Children Aged 6 to Under 18 Years
PublicationThe assessment of body composition in pediatric population is essential for proper nutritional support during hospitalization. However, currently available methods have limitations. This study aims to propose a novel approach for nutrition status assessment and introduce magnetic resonance imaging (MRI)-derived subcutaneous and visceral fat normative reference values. A total of 262 healthy subjects aged from 6 to 18 years underwent...
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T1 RELAXATION TIME CALLIBRATION IN MAGNETIC RESONANCE IMAGING USING NANODIAMOND PHANTOMS
PublicationMRI is increasingly used in radiation treatment planning because of the excellent soft tissue contrast in the obtained images. It allows more precise definition of the boundaries between healthy tissues and those affected by cancerous lesions. To obtain good image quality, the difference in signal between two types of tissue must be significant despite the noise so it must be properly calibrated. This calibration includes...
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Smart Approach for Glioma Segmentation in Magnetic Resonance Imaging using Modified Convolutional Network Architecture (U-NET)
PublicationSegmentation of a brain tumor from magnetic resonance multimodal images is a challenging task in the field of medical imaging. The vast diversity in potential target regions, appearance and multifarious intensity threshold levels of various tumor types are few of the major factors that affect segmentation results. An accurate diagnosis and its treatment demand strict delineation of the tumor affected tissues. Herein, we focus on...
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Validity of MRI brain perfusion imaging method
PublicationW artykule zaprezentowano zbiór analiz dotyczących walidacji metody DSC-MRI. Zbadano wpływ rozmycia, opóźnienia, niskiego SNR bolusa oraz innych możliwych źródeł zakłócających wartość parametru perfuzji. Różne metody uzyskiwania parametrów perfuzji zostały zaprezentowane i porównane.
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Validity of MRI brain perfusion imaging method
PublicationW artykule zaprezentowano zbiór analiz dotyczących walidacji metody DSC-MRI. Zbadano wpływ rozmycia, opóźnienia, niskiego SNR bolusa oraz innych możliwych źródeł zakłócających wartość parametru perfuzji. Różne metody uzyskiwania parametrów perfuzji zostały zaprezentowane i porównane.
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Data augmentation for improving deep learning in image classification problem
PublicationThese days deep learning is the fastest-growing field in the field of Machine Learning (ML) and Deep Neural Networks (DNN). Among many of DNN structures, the Convolutional Neural Networks (CNN) are currently the main tool used for the image analysis and classification purposes. Although great achievements and perspectives, deep neural networks and accompanying learning algorithms have some relevant challenges to tackle. In this...
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Brain perfusion imaging with the use of parametric modelling basing on DSC-MRI data
PublicationW pracy do estymacji parametrów perfuzji mózgu: przepływu krwi mózgowej (cerebral blood flow, CBF), objętości krwi mózgowej (cerebral blood volume, CBV) oraz średniego czasu przejścia (mean transit time, MTT) wykorzystano pomiary DSC-MRI (Dynamic Susceptibility Contrast Magnetic Resonance Imaging). W modelowaniu danych MRI zastoswoano model trzykompartmentowy. Przedstawiono i porównano dwa podejścia do identyfikacji modelu różniące...
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The influence of a change in the meniscus cross-sectional shape on the medio-lateral translation of the knee joint and meniscal extrusion
PublicationObjective The purpose of this study was to evaluate the influence of a change in the meniscus cross sectional shape on its position and on the biomechanics of a knee joint. Methods One main finite element model of a left knee joint was created on the basis of MRI images. The model consisted of bones, articular cartilages, menisci and ligaments. Eight variants of this model with an increased or decreased meniscus height were then...
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Nanodiamonds Doped with Manganese for Applications in Magnetic Resonance Imaging
PublicationNanodiamonds (NDs) are emerging with great potential in biomedical applications like biomarking through fluorescence and magnetic resonance imaging (MRI), targeted drug delivery, and cancer therapy. The magnetic and optical properties of NDs could be tuned by selective doping. Therefore, we report multifunctional manganese-incorporated NDs (Mn-NDs) fabricated by Mn ion implantation. The fluorescent properties of Mn-NDs were tuned...
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Efficiency of new method of removing noisy background from the sequence of MRI scans depending on structure elements used to morphological processing
PublicationPrzedstawiono nową metodę usuwania zaszumionego tła z sekwencji skanów MRI. Każdy skan zawiera przekrój mózgu i tło, oba zaszumione. Tło należy wykluczyć z dalszej analizy. Eliminacji tła dokonano dzięki zastosowaniu opisanego algorytmu wykorzystującego podstawowe operacje morfologiczne: dylację, erozję, otwarcie i zamknięcie do uprzednio zbinaryzowanych zbiorów MRI. Zaprezentowano wyniki przetwarzania otrzymane dla różnych kształtów...
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A Fast Method of Separation of the Noisy Background from the Head-Cross Section in the Sequence of MRI Scans
PublicationThe paper presents a new method of removing the noisy background from the sequence of magnetic resonance imaging (MRl) scans. The sequence of scans is required in order to monitor a passage of a contrast agent through the brain tissue. The scans contain the noisy head-cross data and also the noisy background data. The latter has to be removed and excluded from a further analysis. It is achieved by applying some basic morphological...
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Semi-adaptive feedback active control of MRI noise
PublicationA feedback controller is proposed for cancellation of magnetic resonance imaging (MRI) noise. The design of the controller takes into account specific features of the MRI noise signal. Simulation results show that a considerable rejection rate of the MRI noise can be obtained.
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Modelowanie perfuzji mózgu w badaniach MRI.
PublicationPraca dotyczy dynamicznego badania mózgu z wykorzystaniem techniki MRI (badanie perfuzji). W rezultacie pomiarów, tj. czasowej sekwencji skanów MRI w odpowiedzi na podanie znacznika zmieniajšcego właciwoci magnetyczne tkanek, wyznaczony zostaje model procesu perfuzji. Dla badanego procesu perfuzji opracowano model nieparametryczny (odpowied aproksymowana niezupełnš funkcjš gamma o 3 parametrach) oraz dwukompartmentowy model...
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Limitations of DSC-MRI for quantitative brain perfusion.
PublicationArtykuł przedstawia ograniczenia metody DSC-MRI w ilościowej ocenie przepływów mózgowych. W zakresie pięciu różnych grup zagadnień przeprowadzono testy symulacyjne oraz obliczenia na podstawie badań fantomowych i in-vivo. Pokazano i omówiono wyniki badań.
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A Comparability of Renal Length and Volume Measurements in MRI and Ultrasound in Children
PublicationIntroduction: Despite the significant increase in use of magnetic resonance imaging (MRI) in children, there is still a lack of normal reference values of renal size in this method and reference values are being interpolated from the ultrasound (US) studies. The study provides comparative analysis of agreement in renal length and volume measurements between MRI and ultrasound. Materials and Methods: Ninety-three children with a...
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Automatic recognition of the arterial input function in MRI studies
PublicationArtykuł prezentuje opis automatycznej metody detekcji tętniczej funkcji wejście (AIF). Metoda została porównana z klinicznie pomierzonymi seriami obrazów DSC-MRI.
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Breast MRI segmentation by deep learning: key gaps and challenges
PublicationBreast MRI segmentation plays a vital role in early diagnosis and treatment planning of breast anomalies. Convolutional neural networks with deep learning have indicated promise in automating this process, but significant gaps and challenges remain to address. This PubMed-based review provides a comprehensive literature overview of the latest deep learning models used for breast segmentation. The article categorizes the literature...
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Obrazowanie parametryczne w badaniach mózgu metodami MRI/PET
PublicationCelem tej monografii jest przedstawienie technik obrazowania metodami tomografii rezonansu magnetycznego (MRI - Magnetic Resonance Imaging) i pozytonowej tomografii emisyjnej (PET - Positron Emission Tomography) w kontekście badań dynamicznych mózgu, szczególnie w zakresie syntezy obrazów parametrycznych opisujących jakościowo lub ilościowo przepływ mózgowy. Obrazowanie parametryczne określa technikę syntezy obrazów na podstawie...
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Obrazowanie perfuzji mózgu z wykorzystaniem modelowania parametrycznego danych DSC-MRI
PublicationPomiary DSC-MRI (Dynamic Susceptibility Contrast Magnetic Resonance Imaging) zostały wykorzystane w pracy do estymacji parametrów perfuzji mózgu: przepływu krwi mózgowej (cerebral blood flow, CBF), objętości krwi mózgowej (cerebral blood volume, CBV) oraz średniego czasu przejścia (mean transit time, MTT). Zaproponowano model trzykompartmentowy. Przedstawiono i porównano dwa podejścia do identyfikacji modelu na podstawie danych...
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Image Segmentation of MRI image for Brain Tumor Detection
Publicationthis research work presents a new technique for brain tumor detection by the combination of Watershed algorithm with Fuzzy K-means and Fuzzy C-means (KIFCM) clustering. The MATLAB based proposed simulation model is used to improve the computational simplicity, noise sensitivities, and accuracy rate of segmentation, detection and extraction from MR...
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Wydobywanie informacji diagnostycznej w obrazowaniu mózgu techniką MRI przy wykorzystaniu identyfikacji parametrycznej
PublicationDane MRI wykorzystano w pracy do oceny perfuzji tkanek mózgowych. Obrazowanie perfuzji z wykorzystaniem pomiarów MRI jest szeroko stosowane w praktyce klinicznej do diagnozowania guzów, demencji, choroby Alzheimera i innych. W modelowania danych MRI wykorzystano parametryczny model trzykompartmentowy. Parametry modelu estymowane są na podstawie danych eksperymentalnych: sygnału mierzonego w tętnicy mózgowej oraz sygnału mierzonego...
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Parametric versus nonparametric modelling of dynamic susceptibility contrast enhanced MRI based data
PublicationDynamic tracking of a bolus of a paramagnetic agent (dynamic susceptibility contract - DSC) in MRI (magnetic resonance imaging) measurements is successfully used for assessment of the tissue perfusion and the other features and functions of the brain (i.e. cerebral blood flow - CBF, cerebral blood volume - CBV, mean transit time - MTT). The parametric and nonparametric approaches to the identification of MRI models are presented...
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ESTIMATION OF NONSTATIONARY HARMONIC SIGNALS AND ITS APPLICATION TO ACTIVE CONTROL OF MRI NOISE
PublicationA new adaptive comb filtering algorithm, capable of tracking the fundamental frequency and amplitudes of different frequency components of a nonstationary harmonic signal embedded in white measurement noise, is proposed. Frequency tracking characteristics of the new scheme are studied analytically, proving (under Gaussian assumptions and optimal tuning) its statistical efficiency for quasi-linear frequency changes. Laboratory tests...
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Color-based Detection of Bleeding in Endoscopic Images
PublicationIn this paper a color descriptor designed for bleeding detection in endoscopic images is proposed. The development of the algorithm was carried out on a representative training set of 36 images of bleeding and 25 clear images. Another 38 bleeding and 26 normal images were used in the final stage as a test set. All of the considered images were extracted from separate endoscopic examinations. The experiments include color distribution...
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Acoustical images of the Gulf of Gdansk
PublicationAcoustic images of seabed are of interest to specialists in the field of marine engineering, marine navigation, marine archeology, hydrogeology, etc. New technolo gies based on use of elastic waves, predominantly acoustic waves that allow detecting complexity of geometric forms of seabed, ensure progress in studying the bathymetric structure of seafloor. Use of parametric sources of waves generated...
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Polymodal Method of Improving the Quality of Photogrammetric Images and Models
PublicationPhotogrammetry using unmanned aerial vehicles has become very popular and is already commonly used. The most frequent photogrammetry products are an orthoimage, digital terrain model and a 3D object model. When executing measurement flights, it may happen that there are unsuitable lighting conditions, and the flight itself is fast and not very stable. As a result, noise and blur appear on the images, and the images themselves can...
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Ocena przydatności filtracji Kalmana do poprawy właściwości szumowych danych uzyskiwanych w badaniach DSC-MRI mózgu
PublicationW pracy pokazano jak na poprawę jakość danych z badania DSC-MRI wpływa filtracja stochastyczna Kalmana. Do przeprowadzenia filtracji stochastycznej potrzebny jest opis systemu w kategoriach zmiennych stanu. Warunek ten spełnia użyty model trójkompartmentowy. Filtracji poddane są próbki, które reprezentują pierwszy przepływ znacznika przez ROI. Jakość filtracji Kalmana silnie zależy od ilości próbek, z związku z tym mało liczne...
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Deep Instance Segmentation of Laboratory Animals in Thermal Images
PublicationIn this paper we focus on the role of deep instance segmentation of laboratory rodents in thermal images. Thermal imaging is very suitable to observe the behaviour of laboratory animals, especially in low light conditions. It is an non-intrusive method allowing to monitor the activity of animals and potentially observe some physiological changes expressed in dynamic thermal patterns. The analysis of the recorded sequence of thermal...
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Contour Analysis of Bleeding Regions in Endoscopic Images
PublicationThis paper investigates the problem of detecting bleeding regions in images acquired from endoscopic examinations of gastrointestinal tract. The purpose is to identify the characteristic features of bleeding areas' contours in order to develop an accurate method for discriminating between true bleeding regions and missed detections, which could lead to a significant reduction of the false alarm rate of existing blood-detection...
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A new quaternion-based encryption method for DICOM images
PublicationIn this paper, a new quaternion-based lossless encryption technique for digital image and communication on medicine (DICOM) images is proposed. We have scrutinized and slightly modified the concept of the DICOM network to point out the best location for the proposed encryption scheme, which significantly improves speed of DICOM images encryption in comparison with those originally embedded into DICOM advanced encryption standard...
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Pedestrian detection in low-resolution thermal images
PublicationOver one million people die in car accidents worldwide each year. A solution that will be able to reduce situations in which pedestrian safety is at risk has been sought for a long time. One of the techniques for detecting pedestrians on the road is the use of artificial intelligence in connection with thermal imaging. The purpose of this work was to design a system to assist the safety of people and car intelligence with the use...
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User-generated images and its impact on consumer-based brand equity and on purchase intention
PublicationResearchers and brand managers have limited knowledge of the effects that different types of user-generated content (UGC) have on consumers’ perception of brands and behavior. In this study we investigated 301 authors of a specific category of UGC, i.e., user-generated images (UGI) on a social networking site to confirm the relationships of four drivers reported in literature (co-creation, empowerment, community, and self-concept)...
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Wpływ wyboru elementu strukturalnego użytego w przetwarzaniu morfologicznym na skuteczność nowej metody usuwania tła z sekwencji MRI
PublicationZaprezentowano nową metodę usuwania zaszumionego tła z sekwencji skanów MRI. Na każdy skan składają się dwa obszary: przekrój mózgu i tło, oba zawierające szum. Tło powinno być odseparowane i wykluczone z dalszej analizy. Cel ten został osiągnięty dzięki zastosowaniu opisanego algorytmu, aplikującego podstawowe operacje morfologiczne: dylację, erozję, otwarcie i zamknięcie do uprzednio zbinaryzowanych zbiorów MRI. Pokazano rezultaty...
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Photos and rendered images of LEGO bricks
PublicationThe paper describes a collection of datasets containing both LEGO brick renders and real photos. The datasets contain around 155,000 photos and nearly 1,500,000 renders. The renders aim to simulate real-life photos of LEGO bricks allowing faster creation of extensive datasets. The datasets are publicly available via the Gdansk University of Technology “Most Wiedzy” institutional repository. The source files of all tools used during...
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Signatures and acoustic images of objects moving in water
PublicationObservation of underwater space is part of a generaltrend, which primary purpose is to protect and increasesafety in the selected area. The basic aim of the paper ispresentation of designated acoustic characteristics typicalfor objects moving on the water surface and under water,which represent some knowledge about detection of theseobjects. Create a catalog of acoustic signature and not onlyacoustic, as well as acoustic images...
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From evil demiurge to caring hero: Images of geneticists in the movies
PublicationAlthough images of science and scientists depicted in popular culture have been criticized as an exaggeration and fear mongering, the cinema is an important resource that influences individuals’ beliefs about science. Because popular depictions of science play a crucial role in constructing the public’s ‘scientific imaginary’ they constitute an inherent dimension of the social understanding of science and are as important for...
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Ensembling noisy segmentation masks of blurred sperm images
PublicationBackground: Sperm tail morphology and motility have been demonstrated to be important factors in determining sperm quality for in vitro fertilization. However, many existing computer-aided sperm analysis systems leave the sperm tail out of the analysis, as detecting a few tail pixels is challenging. Moreover, some publicly available datasets for classifying morphological defects contain images limited only to the sperm head. This...
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Merging Images from Parallel Depth Cameras
PublicationIn this paper a problem of simultaneous information acquisition from multiple depth cameras is investigated, aiming at obtaining single overall picture containing information from all cameras. The experiments are carried out on Microsoft Kinect devices. A methodology for merging images from multiple positioned in a line cameras is proposed. The method is based on the concept of simulating a view of an imaginary camera covering...
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Merging Images From Parallel Depth Cameras
PublicationIn this paper a problem of simultaneous information acquisition from multiple depth cameras is investigated, aiming at obtaining single overall picture containing information from all cameras. The experiments are carried out on Microsoft Kinect devices. A methodology for merging images from multiple positioned in a line cameras is proposed. The method is based on the concept of simulating a view of an imaginary camera covering...
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Application of Shape From Shading Technique for Side Scan Sonar Images
PublicationSide scan sonar (SSS) is one of the most widely used imaging systems in the underwater environment. It is relatively cheap and easy to deploy in comparison with more powerful sensors like multibeam echosounder or synthetic aperture sonar. Although, the SSS does not provide directly the seafloor bathymetry measurements. Its outputs are usually in a form of grey level acoustic images of seafloor. However, the analysis of such images...
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Scene Segmentation Basing on Color and Depth Images for Kinect Sensor
PublicationIn this paper we propose a method for segmenting single images from Kinect sensor by considering both color and depth information. The algorithm is based on a series of edge detection procedures designed for particular features of the scene objects. RGB and HSV color planes are separately analyzed in the first step with Canny edge detector, resulting in overall color edges mask. In depth images both clear boundaries and smooth...
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Review of Segmentation Methods for Coastline Detection in SAR Images
PublicationSynthetic aperture radar (SAR) images acquired by airborne sensors or remote sensing satellites contain the necessary information that can be used to investigate various objects of interest on the surface of the Earth, including coastlines. The coastal zone is of great economic importance and is also very densely populated. The intensive and increasing use of coasts and changes of coastlines motivate researchers to try to assess...
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Face with Mask Detection in Thermal Images Using Deep Neural Networks
PublicationAs the interest in facial detection grows, especially during a pandemic, solutions are sought that will be effective and bring more benefits. This is the case with the use of thermal imaging, which is resistant to environmental factors and makes it possible, for example, to determine the temperature based on the detected face, which brings new perspectives and opportunities to use such an approach for health control purposes. The...
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Weighted Clustering for Bees Detection on Video Images
PublicationThis work describes a bee detection system to monitor bee colony conditions. The detection process on video images has been divided into 3 stages: determining the regions of interest (ROI) for a given frame, scanning the frame in ROI areas using the DNN-CNN classifier, in order to obtain a confidence of bee occurrence in each window in any position and any scale, and form one detection window from a cloud of windows provided by...
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Digital Fingerprinting Based on Quaternion Encryption Scheme for Gray-Tone Images
PublicationIn this paper a new idea of digital images fingerprinting is proposed. The method is based on quaternion encryption in the Cipher Block Chaining (CBC) mode. Quaternion sare hyper-complex numbers of rank 4 and thus often applied to mechanics in three-dimensional space. The encryption algorithm described in the paper is designed for gray-tone images but can easily be adopted for color ones. For the encryption purpose, the algorithm...
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A Novel Method for the Deblurring of Photogrammetric Images Using Conditional Generative Adversarial Networks
PublicationThe visual data acquisition from small unmanned aerial vehicles (UAVs) may encounter a situation in which blur appears on the images. Image blurring caused by camera motion during exposure significantly impacts the images interpretation quality and consequently the quality of photogrammetric products. On blurred images, it is difficult to visually locate ground control points, and the number of identified feature points decreases...
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Images of the Seabed of the Gulf of Gdansk Obtained by Means of the Parametric Sonar
PublicationThe main goal of this paper is to present results of the experimental investigation of the seabed by means of parametric echosounder in the form of chosen images. The phenomena of nonlinear interaction between two parallel beams of high intensity gives as a results very narrow beam of low frequency wave, that enables to penetrate the sea bottom. The first step of our investigations was calibration of all the elements of the measuring...
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Mask Detection and Classification in Thermal Face Images
PublicationFace masks are recommended to reduce the transmission of many viruses, especially SARS-CoV-2. Therefore, the automatic detection of whether there is a mask on the face, what type of mask is worn, and how it is worn is an important research topic. In this work, the use of thermal imaging was considered to analyze the possibility of detecting (localizing) a mask on the face, as well as to check whether it is possible to classify...