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Cadmium tri-tert-butoxysilanethiolates: Structural and spectroscopic models of metal sites in proteins
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Differentially expressed proteins in the blood serum of piglets in response to a diet supplemented with inulin
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Cadmium tri-tert-butoxysilanethiolates. Structural and spectroscopic models of metal sites in proteins.
PublicationW publikacji opisano syntezy i struktury dla dwóch heteroleptycznych kompleksów kadmu z rdzeniem CdS2NO2 i CdS2N2. Bis(tri-tert-butoksysilanotiolato)(1-metyloimidazol)kadmu(II) oraz bis(tri-tert-butoksysilanotiolato)bis(1-metyloimidazol)kadmu(II) współistnieją w roztworze chloroformu przy różnych stężeniach Bis(tri-tert-butoksysilanotiolanu) kadmu(II) i 1 metyloimidazolu. Rotzwór ten został scharakteryzowany za pomocą analizy spektralnej...
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Extension of the UNRES Coarse-Grained Force Field to Membrane Proteins in the Lipid Bilayer
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Single-stranded DNA-binding proteins (SSBs) - sources and applicationsin molecular biology
PublicationBiałka wiążące się do jednoniciowego DNA (SSB) odgrywają ważną rolę w replikacji, rekombinacji i naprawie DNA u bakterii, archea i eukariota. Ostatnio wzrosło zainteresowanie białkami SSB jako przydatnymi narzędziami w metodach badawczych biologii molekularnej, analitycznych i diagnostycznych. Większość znanych prokariotycznych białek SSB zbudowanych jest z czterech podjednostek (homotetramer) z jedną domeną wiążąca (OB) jednoniciowe...
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FT-Raman Spectroscopy as a Tool to Study the Secondary Structures of Wheat Gliadin Proteins
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Does Nitrogen Fertilization Affect the Secondary Structures of Gliadin Proteins in Hypoallergenic Wheat?
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The Characteristics of New SSB Proteins from Metagenomic Libraries and Their Use in Biotech Applications
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Role of the Solvation Water in Remote Interactions of Hyperactive Antifreeze Proteins with the Surface of Ice
PublicationMost protein molecules do not adsorb onto ice, one of the exceptions being so-called antifreeze proteins. In this paper, we describe that there is a force pushing an antifreeze protein molecule away from the ice surface when it is not oriented with its ice-binding plane toward the ice and that this pushing force may be also present even when the protein is oriented with its ice-binding plane toward the ice. This force is absent...
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Why the Solvation Water around Proteins Is More Dense than Bulk Water
PublicationThe main aim of this work is to propose a rational explanation of the commonly observed phenomenon of increasing water density within solvation shell of proteins. We have observed that the geometry of the water–water hydrogen bond network within solvation layer differs from the one in bulk water, and it is the result of interactions of water molecules with protein surface. Altered geometry of the network reflects changes in the...
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Water-mediated long-range interactions between the internal vibrations of remote proteins
PublicationIt is generally acknowledged that the mobility of protein atoms and the mobility of water molecules in the solvation layer are connected. In this article, we answer the question whether a similar interdependence exists between the motions of atoms of proteins separated by the hydration layers of variable thickness. The system consisted of a kinesin catalytic domain and a tubulin dimer. It was studied using molecular dynamics simulations....
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Why the solvation water around proteins is more dense than bulk water
PublicationThe main aim of this work is to propose a rational explanation of commonly observed phenomenon of increasing water density within solvation shell of proteins. We have observed that geometry of the water-water hydrogen bond network within solvation layer differs from the one in bulk water and it is the effect of interactions of water molecules with protein surface. Altered geometry of the network reflects changes in the structure...
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Proteinase 3 phosphonic inhibitors
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MUTL PROTEIN AS A COMMON CONSTITUENT OF VSP, BER, NER AND MMR REPAIR SYSTEMS
PublicationMutS and MutL proteins are renowned mostly for their functions in well-characterized, post-DNA replication mismatch repair system (MMR). However, there is growing evidence that MMR system is not the only field of action of these proteins. Moreover, involvement in MMR does not even have to be their primary function. There are some reports indicating involvement of MutL in BER, NER and VSP (very short patch repair). MutL protein...
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Emulsification alters simulated gastrointestinal proteolysis of β-casein and β-lactoglobulin
PublicationWe have studied the effect of the adsorption of milk proteins at the oil-water interface on their digestibility in simulated gastrointestinal environment. The investigations aimed to characterize how both the breakdown of the adsorbed proteins and the interactions with physiological surfactants, phosphatidylcholine (PC) and bile salts (BS), influence structural transformations of model, protein-stabilized food emulsions in the...
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Characterization of a single-stranded DNA-binding-like Protein from Nanoarchaeum equitans - a nucleic acid binding protein with broad substrate specificity
PublicationBackground SSB (single-stranded DNA-binding) proteins play an essential role in all living cells and viruses, as they are involved in processes connected with ssDNA metabolism. There has recently been an increasing interest in SSBs, since they can be applied in molecular biology techniques and analytical methods. Nanoarchaeum equitans, the only known representative of Archaea phylum Nanoarchaeota, is a hyperthermophilic, nanosized,...
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Novel primosomal protein B from Clostridium pastuerianum
PublicationPriB is a primosomal protein that catalyzes DNA replication in Procaryota. The replication pathway starts with PriA protein - the initiator protein that binds to a DNA replication fork, unwinds double-stranded DNA and role of PriB is to stabilize PriA on the DNA. However there are many biochemical differences in replication mechanism in bacteria and only some of them use PriB proteins. A few of PriB proteins were published and...
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Novel primosomal protein B from Clostridium pasteurianum
PublicationPriB is a primosomal protein that catalyzes DNA replication in Procaryota. The replication pathway starts with PriA protein - the initiator protein that binds to a DNA replication fork, unwinds double-stranded DNA and role of PriB is to stabilize PriA on the DNA. However there are many biochemical differences in replication mechanism in bacteria and only some of them use PriB proteins. A few of PriB proteins were published and...
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Electrosynthesis of potato starch–whey protein isolate complexes
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The SERRATE protein is involved in alternative splicing in Arabidopsis thaliana
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The SERRATE protein is involved in alternative splicing in Arabidopsis thaliana
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Role of Oligosaccharide Chain Polarity in Protein–Glycosaminoglycan Interactions
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A bifunctional chimeric protein consisting of MutS and beta-galactoside
PublicationPraca pokazuje konstrukcję DNA plazmidowego kodującego bifunkcjonalne białko chimeryczne złożone z MutS Thermus thermophilus i beta-galaktozydazy E.coli, optymalizację jego ekspresji i oczyszczania. Białko to testowano w metodzie wykrywania mutacji punktowych, wykorzystując kolorymetryczne mierzenie aktywności domeny reporterowej beta galaktozydazy.
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Construction and purification of his6-Thermus thermophilus MutS protein
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A bifunctional chimeric protein consisting of MutS and beta-galactosidase
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The protein folding problem: global optimization of force fields
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Lipid-protein interactions in membranes: a molecular modelling study
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Effect of increased protein intake on the risk of female infertility
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Copper containing protein sites - structure, properties and models
PublicationEnzymy organizmów żywych katalizują wiele reakcji stosowanych w przemyśle chemicznym. Przykładem potencjalnego zastosowania enzymu w produkcji jest synteza L-Dopy przy udziale tyrozynazy. Ze względu na możliwe praktyczne zastosowanie w katalizie, otrzymano i opisano wiele prostych modeli miejsc aktywnych enzymów. W artykule opisano niektóre modele białek zawierających miedź.
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Construction and purification of his6-Thermus thermophilus MutS protein.
PublicationGen mutS z termofilnej bakterii Thermus thermophilus zamplifikowano przy użyciu PCR, sklonowano i przeprowadzono jego ekspresję w E. coli. Rekombinantowe białko MutS zawierające oligohistydynową domenę na N-końcu oczyszczono w jednoetapowej procedurze przy wykorzystaniu chromatografii powinowactwaNi(2+). Zdolność do rozpoznania niekomplementarności białka his(6)-MutS potwierdzono w eksperymentach ochrony DNA przed trawieniem...
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Mechanical Properties of 3D Printed Parts and Their Injection Molded Alternatives Subjected to Environmental Aging
PublicationAdditive manufacturing is the technology used in medical, industrial, or lifestyle applications. The scientific literature include works reporting various manufacturing parameters’ influence on changes in additive manufacturing components’ mechanical behavior, especially with fused filament fabrication (FFF). The changes in mechanical strength and toughness of FFF compared to injection molding parts were studied. In the study,...
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Fatigue life of steel, laser welded panels
PublicationW publikacji przedstawiono zagadnienia dotyczące możliwości analizy trwałości zmęczeniowej stalowyxh paneli spawanych laserowo typu sandwich. Przedstawiono wyniki badań laboratoryjnych w skali naturalnej a także krzywe projektowe uzyskane na podstawie systematycznych badań połączeń elementarnych spawanych laserowo. Na podstawie przedstawionych i uogólnionych wyników pokazano propozycję metodyki szacowania trwałości zmęczeniowej...
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Forecasting of fatigue life of laser welded joints
PublicationW pracy przedstawiono podstawowe dane na temat stalowych paneli typu sandwich. Zaprezentowano wyniki testów zmęczeniowych elementarnych połączeń teowych spawanych laserowo. Omówiono szczegółowo te cechy, które mają istotny wpływ na statyczne i zmęczeniowe własności złącza. Na podstawie przedstawionych wyników badań zmęczeniowych elementarnych połączeń spawanych laserowo uzyskano krzywą projektową S-N dla jednego z pokazanych modeli...
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Experimental investigations of the hydroelasticity of a liquid-filled tank
PublicationW artykule przedstwiono wyniki badań eksperymentalnych dotyczących współoddziaływania konstrukcji odkształcalnej z cieczą. Badania przeprowadzono na dwóch zbiornikach prostopadłościennych ze sprężyście odkształcalnymi ścianami szczytowymi. Badanie tego zjawiska ma odniesienie do często spotykanych zdarzeń praktycznych jak zderzenie zbiornikowca z innym statkiem lub nabrzeżem portowym.
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Experimental investigations of the model tank of a liquid filled
PublicationPraca dotyczy zagadnienia hydrosprężystości wewnętrznej i jest poświęcona badaniom eksperymentalnym drgań na modelu zbiornika wypełnionego cieczą. Badania dotyczą drgań giętnych w płaszczyźnie pionowej zbiornika odkształcalnego zawierającego ciecz. Otrzymano oscylogramy dla modelu suchego (brak cieczy) oraz dla modelu wypełnionego całkowicie cieczą. Następnie dokonano obróbki tych oscylogramów pod kątem badania drgań modelu w zakresie...
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Biocompatibility and bioactivity of bearing loaded metallic implants
PublicationPresentation of developed titanium alloy base composite materials possessing better biocompatibility, longer lifetime and bioactivity behavior for bearing loaded implants, e.g. hip joint and knee joint endoproshtesis.
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Photocatalytic activity of TiO2 loaded with metal clusters
PublicationTiO2 modyfikowano powierzchniowo klasterami metali: srebra, złota i platyny. Zbadano wpływ rodzaju i ilości wprowadzonej domieszki, oraz matrycy TiO2 na aktywność fotokatalityczną otrzymanych próbek. Fotoaktywność próbek badano w reakcji degradacji fenolu (Co = 0,21 mmol/dm3 ) w zakresie światła Vis lub UV. Najwyższą aktywność zaobserwowano dla fotokatalizatorów zawierających 2%Ag, 1%Au oraz 0,5%Pt. Po 60 min naświetlania światłem...
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Safely problems of partially filled liquid tanks.
PublicationPrzedstawiono równania ruchu zbiorników wypełnionych cieczą. Przeprowadzono obliczenia numeryczne tychże zbiorników w przypadkach niebezpiecznych ze względów ekologicznych.
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Roxithromycin-loaded lipid nanoparticles for follicular targeting
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Stability of an Innovative Cold-Formed GEB Section
PublicationThis paper is focused on the numerical analysis and experimental test of stability of the cold-formed profile with an innovative GEB cross-section. For the shell model of the axially compressed member, the linear buckling analysis and the nonlinear static analysis were carried out. In the numerical research, the buckling load and the limit load for variable section heights were obtained. Some of the results were compared with the...
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Manoeuvring forces on azimuthing podded propulsor model
PublicationThis paper presents the preliminary part of comprehensive manoeuvring open- water tests of a gas carrier model. The paper focuses on open water experiments with an azimuthing podded propulsor. The test program was carried out in the cavitation tunnel and the large towing tank of Ship Hydromechanics Division, Ship Design and Research Centre, Gdańsk. The pod was tested as a pushing unit with a 161.3 mm diameter propeller. Steering...
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On local buckling of cold-formed channel members
PublicationThe paper deals with local buckling of the compressed flanges of cold-formed thin-walled channel beams subjected to pure bending or axially compressed columns. Arbitrarily shaped flanges of open cross-sections and the web-flange interactions are taken into account. Buckling deformation of a beam flange is described by displacement related to torsion of the flange about the line of its connection with the web. Total potential energy...
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Analysis of wave propagation in a bolted steel joint
PublicationThe paper presents results of numerical and experimental investigations of elastic wave propagation in a bolted single-lap joint. The research was carried out for both symmetric and antisymmetric Lamb wave modes. In experimental studies the PZT transducers were used to excite and register wave propagation signals. The controlled value of the torque during measurements was ensured by the use of high precision torque wrenches. Numerical...
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Buckling Analysis of Cold Formed Silo Column
PublicationThe paper is devoted to stability analysis of different models of steel cold formed silo column. The steel cylindrical silos are often composed of corrugated walls and vertical open-sectional columns uniformly placed along the silo circumference. Both the whole 3D silo, a simplified model consisting of one column with a part of the silo walls, and a single column resting on elastic foundation provided by the silo walls were analyzed....
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DEFORMATIONS OF INNOVATIVE COLD-FORMED GEB SECTIONS
PublicationPermanent urban growth of the world of today world implies demanding challenges for the steel construction industry. Nowadays, one of the most important issues is the cost optimization of steel structures. Since the weight of building materials is a major component of the total cost, engineers and designers try to reduce structural weight, without compromising durability and sustainability of a steel structure. Therefore, light...
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The investigation of polyester composites filled by modified bentonite
PublicationPraca dotyczy zagospodarowania odpadów poliestrowo-szklanych przez wytworzenie kompozytów z ich użyciem oraz żywicy poliestrowej, mączki dolomitowej i nanonapełniacza. Wykazano, ze dodatek 2% nanonapełniacza do do kompozytów poliestrowych zawierających 15% masowych odpadów pozwala na uzyskanie materiału wykazującego korzystne właściwości wytrzymałościowe. Proponowany sposób modyfikacji kompozytów poliestrowych jest nowym rozwiązaniem...
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Buckling analysis of cold formed steel column
PublicationW pracy przedstawiono analizę słupa zimnogiętego o przekroju otwartym. Przeprowadzono analizy statyczne liniowe i nieliniowe. Analizowano wpływ podłoża sprężystego oraz sztywność połączenia dwóch sąsiednich słupów.
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Access to Side-On Bonded Tungsten Phosphanylphosphinidene Complexes
PublicationMetathesis reactions between diimido complexes of tungsten(VI)[(ArN)2WCl2] (Ar = 2,6-iPr2C6H3) and lithium derivatives of diphosphanes R2P-P(SiMe3)Li (R = tBu and iPr) yield two anionic diimido complexes of tungsten with side-on bonded phosphanylphosphinidene ligands, [(ArN)2WCl(η2-R2P-P)]-. Both complexes are structurally characterized. A possible reaction mechanism and the role of donor solvents are discussed on the basis of...
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Finite-difference analysis of a loaded hemispherical resonator
PublicationPrzedstawiono analizę osiowo symetrycznej struktury otwartego rezonatora he-misferycznego zawierającego warstwowe ośrodki dielektryczne. W analizie wy-korzystano metodę różnic skończonych w dziedzinie częstotliwości (FDFD). Wcelu osiągnięcia wysokiej dokładności obliczeń zastosowano zaawansowane me-tody modelowania warunków brzegowych i granicznych.
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Tourism for older and disabled people
PublicationTourist offer for the older and disabled is getting wider. Many hotels and cities are adjusted to disabled people's needs, but there are not enough safe places for leisure, where they could be surrounded by nature. In comparison with cities - villages and small towns have very little to offer as far as tourism is concerned. This problem is noticed by small local communities that threat it as a chance for their economical development....