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Structural and dynamic changes adopted by EmrE, multidrug transporter protein—Studies by molecular dynamics simulation
PublikacjaEmrE protein transports positively charged aromatic drugs (xenobiotics) in exchange for two protons and thus provides bacteria resistance to variety of drugs. In order to understand how this protein may recognize ligands, the monomer and asymmetric apo-form of the EmrE dimer embedded in a heterogeneous phospholipid (POPE + POPG) membrane were studied by molecular dynamics simulations. Dimer is regarded as a functional form of the...
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Novel application of terminal restriction fragments length polymorphism method (t-RFLP) for identification of six clinically important Candida sp.
PublikacjaTerminal restriction fragments length polymorphism method (t-RFLP) is a modified classical RFLP method. The main difference is based on carrying out PCR using a fluorescently labeled primer or primers. The result of such modification is that after digestion of amplicons only terminal fragments of PCR product (containing fluorescent dye) are visualized. T-RFLP method has found application in environmental microbiology and epidemiology....
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DNA methylation in cancer development, diagnosis and therapy-multiple opportunities for genotoxic agents to act as methylome disruptors or remediators
PublikacjaThe role of DNA methylation and recently discovered hydroxymethylation in the function of the human epigenome is currently one of the hottest topics in the life sciences. Progress in this field of research has been further accelerated by the discovery that alterations in the methylome are not only associated with key functions of cells and organisms, such as development, differentiation and gene expression, but may underlie a number...
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Modeling of Surface Roughness in Honing Processes by UsingFuzzy Artificial Neural Networks
PublikacjaHoning processes are abrasive machining processes which are commonly employed to improve the surface of manufactured parts such as hydraulic or combustion engine cylinders. These processes can be employed to obtain a cross-hatched pattern on the internal surfaces of cylinders. In this present study, fuzzy artificial neural networks are employed for modeling surface roughness parameters obtained in finishing honing operations. As...
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Geometry optimization of steroid sulfatase inhibitors - the influence on the free binding energy with STS
PublikacjaIn the paper we review the application of two techniques (molecular mechanics and quantum mechanics) to study the influence of geometry optimization of the steroid sulfatase inhibitors on the values of descriptors coded their chemical structure and their free binding energy with the STS protein. We selected 22 STS-inhibitors and compared their structures optimized with MM+, PM7 and DFT B3LYP/6–31++G* approaches considering separately...
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Relay-aided Wireless Sensor Network Discovery Algorithm for Dense Industrial IoT utilizing ESPAR Antennas
PublikacjaIndustrial Internet of Things (IIoT) applicationsrequire reliable and efficient wireless communication. Assumingdense Wireless Sensor Networks (WSNs) operating in a harshenvironment, a concept of a Time Division Multiple Access(TDMA) based WSN enriched with Electronically SteerableParasitic Array Radiator (ESPAR) antennas is proposed andexamined in this work. The utilized...
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Direct electrical stimulation of the human brain has inverse effects on the theta and gamma neural activities
PublikacjaObjective: Our goal was to analyze the electrophysiological response to direct electrical stimulation (DES) systematically applied at a wide range of parameters and anatomical sites, with particular focus on neural activities associated with memory and cognition. Methods: We used a large set of intracranial EEG (iEEG) recordings with DES from 45 subjects with electrodes...
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Electrochemical and in silico approaches for liver metabolic oxidation of antitumor-active triazoloacridinone C -1305
Publikacja5-Dimethylaminopropylamino-8-hydroxytriazoloacridinone (C-1305) is a promising antitumor compound developed in our laboratory. A better understanding of its metabolic transformations is still needed to explain the multidirectional mechanism of pharmacological action of triazoloacridinone derivatives at all. Thus, the aim of the current work was to predict oxidative pathways of C-1305 that would reflect its phase I metabolism. The...
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Repeated Projectile Impact Tests on Multi-Layered FibrousCementitious Composites
PublikacjaThis research aims to experimentally evaluate the behaviour of multi-layered fibrous cementitious composites withintermediate Glass Fibre Meshes (GFM) under repeated projectile load. The impact load was subjected through a convexedge projectile needle at a low velocity on cylindrical specimens of three-layered fibrous cementitious composites, whichhave two different steel fibre distributions. In series A mixtures, a constant steel...
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Structural and dynamic insights on the EmrE protein with TPP+ and related substrates through molecular dynamics simulations
PublikacjaEmrE is a bacterial transporter protein that forms an anti-parallel homodimer with four transmembrane helices in each monomer. EmrE transports positively charged aromatic compounds, such as TPP+ and its derivatives. We performed molecular dynamics (MD) simulations of EmrE in complex with TPP+, MeTPP+, and MBTPP+ embedded in a membrane. The detailed molecular properties and interactions were analysed for all EmrE-ligand complexes....
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Optical Sensor Based Gestures Inference Using Recurrent Neural Network in Mobile Conditions
PublikacjaIn this paper the implementation of recurrent neural network models for hand gesture recognition on edge devices was performed. The models were trained with 27 hand gestures recorded with the use of a linear optical sensor consisting of 8 photodiodes and 4 LEDs. Different models, trained off-line, were tested in terms of different network topologies (different number of neurons and layers) and different effective sampling frequency...
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Creating a Realible Music Discovery and Recomendation System
PublikacjaThe aim of this paper is to show problems related to creating a reliable music dis-covery system. The SYNAT database that contains audio files is used for the purpose of experiments. The files are divided into 22 classes corresponding to music genres with different cardinality. Of utmost importance for a reliable music recommendation system are the assignment of audio files to their appropriate gen-res and optimum parameterization...
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Comparison of Classification Methods for EEG Signals of Real and Imaginary Motion
PublikacjaThe classification of EEG signals provides an important element of brain-computer interface (BCI) applications, underlying an efficient interaction between a human and a computer application. The BCI applications can be especially useful for people with disabilities. Numerous experiments aim at recognition of motion intent of left or right hand being useful for locked-in-state or paralyzed subjects in controlling computer applications....
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Minimizing Distribution and Data Loading Overheads in Parallel Training of DNN Acoustic Models with Frequent Parameter Averaging
PublikacjaIn the paper we investigate the performance of parallel deep neural network training with parameter averaging for acoustic modeling in Kaldi, a popular automatic speech recognition toolkit. We describe experiments based on training a recurrent neural network with 4 layers of 800 LSTM hidden states on a 100-hour corpora of annotated Polish speech data. We propose a MPI-based modification of the training program which minimizes the...
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Problems of modelling toxic compounds emitted by a marine internal combustion engine for the evaluation of its structure parameters
PublikacjaThe paper presents the possibility of using an analytical study of the engine exhaust ignition to evaluate the technical condition of the selected components. Software tools available for the analysis of experimental data commonly use multiple regression model that allows the study of the effects and iterations between model input quantities and one output variable. The use of multi-equation models gives a lot of freedom in the...
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Structural insights, biocatalytic characteristics, and application prospects of lignin-modifying enzymes for sustainable biotechnology
PublikacjaLignin modifying enzymes (LMEs) have gained widespread recognition in depolymerization of lignin polymers by oxidative cleavage. LMEs are a robust class of biocatalysts that include lignin peroxidase (LiP), manganese peroxidase (MnP), versatile peroxidase (VP), laccase (LAC), and dye-decolorizing peroxidase (DyP). Members of the LMEs family act on phenolic, non-phenolic substrates and have been widely researched for valorization...
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Determining an Architectural Character for Durban Residential Streetscapes
PublikacjaIn the current global context and in consideration of the Sustainable Development Goals, there is a strong need for urban densification. However, this development is also driven by processes linked to the idea of capitalism and 'economic growth'. Such development often leads to the loss of the 'genius loci' of a place and sometimes even overlooks the fact that the quality of the built environment greatly influences the health and...
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Semantic URL Analytics to Support Efficient Annotation of Large Scale Web Archives
PublikacjaLong-term Web archives comprise Web documents gathered over longer time periods and can easily reach hundreds of terabytes in size. Semantic annotations such as named entities can facilitate intelligent access to the Web archive data. However, the annotation of the entire archive content on this scale is often infeasible. The most efficient way to access the documents within Web archives is provided through their URLs, which are...
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A novel in vivo approach to assess strains of the human abdominal wall under known intraabdominal pressure
PublikacjaThe study concerns mechanical behaviour of a living human abdominal wall. A better mechanical understanding of a human abdominal wall and recognition of its material properties is required to find mechanically compatible surgical meshes to significantly improve the treatment of ventral hernias. A non-invasive methodology, based on in vivo optical measurements is proposed to determine strains of abdominal wall corresponding to...
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Facilitating free travel in the Schengen area—A position paper by the European Association for Biometrics
PublikacjaDue to migration, terror-threats and the viral pandemic, various EU member states have re-established internal border control or even closed their borders. European Association for Biometrics (EAB), a non-profit organisation, solicited the views of its members on ways which biometric technologies and services may be used to help with re-establishing open borders within the Schengen area while at the same time mitigating any adverse...
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Tagged images with LEGO bricks - Bricks Sloped
Dane BadawczeThe set contains images of LEGO bricks (from Bricks Sloped category). The images were prepared for training neural network for recognition and labeling of LEGO bricks. The images contain one brick each. The images were taken from different sides by handheld camera hovering over the bricks lying on a white, non reflective surface.
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Tagged images with LEGO bricks - Tiles
Dane BadawczeThe set contains images of LEGO bricks (from Tiles category). The images were prepared for training neural network for recognition and labeling of LEGO bricks. The images contain one brick each. The images were taken from different sides by handheld camera hovering over the bricks lying on a white, non reflective surface.
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Tagged images with LEGO bricks - Windscreens and Fuselage
Dane BadawczeThe set contains images of LEGO bricks (from Windscreens and Fuselage category). The images were prepared for training neural network for recognition and labeling of LEGO bricks. The images contain one brick each. The images were taken from different sides by handheld camera hovering over the bricks lying on a white, non reflective surface.
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Tagged images with LEGO bricks - Bricks Special
Dane BadawczeThe set contains images of LEGO bricks (from Bricks Special category). The images were prepared for training neural network for recognition and labeling of LEGO bricks. The images contain one brick each. The images were taken from different sides by handheld camera hovering over the bricks lying on a white, non reflective surface.
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Tagged images with LEGO bricks - Bricks
Dane BadawczeThe set contains images of LEGO bricks (from Bricks category). The images were prepared for training neural network for recognition and labeling of LEGO bricks. The images contain one brick each. The images were taken from different sides by handheld camera hovering over the bricks lying on a white, non reflective surface.
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Surface EMG-based signal acquisition for decoding hand movements
Dane BadawczeBiosignal processing plays a crucial role in modern hand prosthetics. The challenge is to restore functionality of a lost limb based on the signals acquired from the surface of the stump. The number of sensors (emg channels) used for signal acquisition influence the quality of a prosthetic hand. Modern algorithms (including neural networks) can significantly...
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Tagged images with LEGO bricks - Technic Beams
Dane BadawczeThe set contains images of LEGO bricks (from Technic Beams category). The images were prepared for training neural network for recognition and labeling of LEGO bricks. The images contain one brick each. The images were taken from different sides by handheld camera hovering over the bricks lying on a white, non reflective surface.
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Tagged images with LEGO bricks - Technic Pins
Dane BadawczeThe set contains images of LEGO bricks (from Technic Pins category). The images were prepared for training neural network for recognition and labeling of LEGO bricks. The images contain one brick each. The images were taken from different sides by handheld camera hovering over the bricks lying on a white, non reflective surface.
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Tagged images with LEGO bricks - Minifig Accessories
Dane BadawczeThe set contains images of LEGO bricks (from Minifig Accessories category). The images were prepared for training neural network for recognition and labeling of LEGO bricks. The images contain one brick each. The images were taken from different sides by handheld camera hovering over the bricks lying on a white, non reflective surface.
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Tagged images with LEGO bricks - Plates
Dane BadawczeThe set contains images of LEGO bricks (from Plates category). The images were prepared for training neural network for recognition and labeling of LEGO bricks. The images contain one brick each. The images were taken from different sides by handheld camera hovering over the bricks lying on a white, non reflective surface.
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Tagged images with LEGO bricks - Technic Panels
Dane BadawczeThe set contains images of LEGO bricks (from Technic Panels category). The images were prepared for training neural network for recognition and labeling of LEGO bricks. The images contain one brick each. The images were taken from different sides by handheld camera hovering over the bricks lying on a white, non reflective surface.
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Tagged images with LEGO bricks - Pneumatics
Dane BadawczeThe set contains images of LEGO bricks (from Pneumatics category). The images were prepared for training neural network for recognition and labeling of LEGO bricks. The images contain one brick each. The images were taken from different sides by handheld camera hovering over the bricks lying on a white, non reflective surface.
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Tagged images with LEGO bricks - Technic Bricks
Dane BadawczeThe set contains images of LEGO bricks (from Technic Bricks category). The images were prepared for training neural network for recognition and labeling of LEGO bricks. The images contain one brick each. The images were taken from different sides by handheld camera hovering over the bricks lying on a white, non reflective surface.
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Tagged images with LEGO bricks - Technic Gears
Dane BadawczeThe set contains images of LEGO bricks (from Technic Gears category). The images were prepared for training neural network for recognition and labeling of LEGO bricks. The images contain one brick each. The images were taken from different sides by handheld camera hovering over the bricks lying on a white, non reflective surface.
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Tagged images with LEGO bricks - Panels
Dane BadawczeThe set contains images of LEGO bricks (from Panels category). The images were prepared for training neural network for recognition and labeling of LEGO bricks. The images contain one brick each. The images were taken from different sides by handheld camera hovering over the bricks lying on a white, non reflective surface.
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Tagged images with LEGO bricks - Technic Bushes
Dane BadawczeThe set contains images of LEGO bricks (from Technic Bushes category). The images were prepared for training neural network for recognition and labeling of LEGO bricks. The images contain one brick each. The images were taken from different sides by handheld camera hovering over the bricks lying on a white, non reflective surface.
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Tagged images with LEGO bricks - Transportation - Sea and Air
Dane BadawczeThe set contains images of LEGO bricks (from Transportation - Sea and Air category). The images were prepared for training neural network for recognition and labeling of LEGO bricks. The images contain one brick each. The images were taken from different sides by handheld camera hovering over the bricks lying on a white, non reflective surface.
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Tagged images with LEGO bricks - Bionicle Hero Factory and Constraction
Dane BadawczeThe set contains images of LEGO bricks (from Bionicle Hero Factory and Constraction category). The images were prepared for training neural network for recognition and labeling of LEGO bricks. The images contain one brick each. The images were taken from different sides by handheld camera hovering over the bricks lying on a white, non reflective surface.
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Tagged images with LEGO bricks - Tiles Round and Curved
Dane BadawczeThe set contains images of LEGO bricks (from Tiles Round and Curved category). The images were prepared for training neural network for recognition and labeling of LEGO bricks. The images contain one brick each. The images were taken from different sides by handheld camera hovering over the bricks lying on a white, non reflective surface.
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Tagged images with LEGO bricks - Hinges Arms and Turntables
Dane BadawczeThe set contains images of LEGO bricks (from Hinges Arms and Turntables category). The images were prepared for training neural network for recognition and labeling of LEGO bricks. The images contain one brick each. The images were taken from different sides by handheld camera hovering over the bricks lying on a white, non reflective surface.
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Tagged images with LEGO bricks - Plates Angled
Dane BadawczeThe set contains images of LEGO bricks (from Plates Angled category). The images were prepared for training neural network for recognition and labeling of LEGO bricks. The images contain one brick each. The images were taken from different sides by handheld camera hovering over the bricks lying on a white, non reflective surface.
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Tagged images with LEGO bricks - Windows and Doors
Dane BadawczeThe set contains images of LEGO bricks (from Windows and Doors category). The images were prepared for training neural network for recognition and labeling of LEGO bricks. The images contain one brick each. The images were taken from different sides by handheld camera hovering over the bricks lying on a white, non reflective surface.
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Tagged images with LEGO bricks - Plates Special
Dane BadawczeThe set contains images of LEGO bricks (from Plates Special category). The images were prepared for training neural network for recognition and labeling of LEGO bricks. The images contain one brick each. The images were taken from different sides by handheld camera hovering over the bricks lying on a white, non reflective surface.
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Tagged images with LEGO bricks - Technic Connectors
Dane BadawczeThe set contains images of LEGO bricks (from Technic Connectors category). The images were prepared for training neural network for recognition and labeling of LEGO bricks. The images contain one brick each. The images were taken from different sides by handheld camera hovering over the bricks lying on a white, non reflective surface.
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Tagged images with LEGO bricks - Technic Beams Special
Dane BadawczeThe set contains images of LEGO bricks (from Technic Beams Special category). The images were prepared for training neural network for recognition and labeling of LEGO bricks. The images contain one brick each. The images were taken from different sides by handheld camera hovering over the bricks lying on a white, non reflective surface.
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Tagged images with LEGO bricks - Bricks Curved
Dane BadawczeThe set contains images of LEGO bricks (from Bricks Curved category). The images were prepared for training neural network for recognition and labeling of LEGO bricks. The images contain one brick each. The images were taken from different sides by handheld camera hovering over the bricks lying on a white, non reflective surface.
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Tagged images with LEGO bricks - Tiles Special
Dane BadawczeThe set contains images of LEGO bricks (from Tiles Special category). The images were prepared for training neural network for recognition and labeling of LEGO bricks. The images contain one brick each. The images were taken from different sides by handheld camera hovering over the bricks lying on a white, non reflective surface.
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Tagged images with LEGO bricks - Transportation - Land
Dane BadawczeThe set contains images of LEGO bricks (from Transportation - Land category). The images were prepared for training neural network for recognition and labeling of LEGO bricks. The images contain one brick each. The images were taken from different sides by handheld camera hovering over the bricks lying on a white, non reflective surface.
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Tagged images with LEGO bricks - Plates Round Curved and Dishes
Dane BadawczeThe set contains images of LEGO bricks (from Plates Round Curved and Dishes category). The images were prepared for training neural network for recognition and labeling of LEGO bricks. The images contain one brick each. The images were taken from different sides by handheld camera hovering over the bricks lying on a white, non reflective surface.
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Tagged images with LEGO bricks - Bricks Wedged
Dane BadawczeThe set contains images of LEGO bricks (from Bricks Wedged category). The images were prepared for training neural network for recognition and labeling of LEGO bricks. The images contain one brick each. The images were taken from different sides by handheld camera hovering over the bricks lying on a white, non reflective surface.