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Search results for: folded%20proteins
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Role of the Solvation Water in Remote Interactions of Hyperactive Antifreeze Proteins with the Surface of Ice
PublicationMost protein molecules do not adsorb onto ice, one of the exceptions being so-called antifreeze proteins. In this paper, we describe that there is a force pushing an antifreeze protein molecule away from the ice surface when it is not oriented with its ice-binding plane toward the ice and that this pushing force may be also present even when the protein is oriented with its ice-binding plane toward the ice. This force is absent...
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Crystal structures of the Bacillus subtilis prophage lytic cassette proteins XepA and YomS
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Why the solvation water around proteins is more dense than bulk water
PublicationThe main aim of this work is to propose a rational explanation of commonly observed phenomenon of increasing water density within solvation shell of proteins. We have observed that geometry of the water-water hydrogen bond network within solvation layer differs from the one in bulk water and it is the effect of interactions of water molecules with protein surface. Altered geometry of the network reflects changes in the structure...
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Proteins Structure Models in the Evaluation of Novel Variant (C.472_477del) in the MOCS2 Gene
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Extension of the UNRES Coarse-Grained Force Field to Membrane Proteins in the Lipid Bilayer
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Why the Solvation Water around Proteins Is More Dense than Bulk Water
PublicationThe main aim of this work is to propose a rational explanation of the commonly observed phenomenon of increasing water density within solvation shell of proteins. We have observed that the geometry of the water–water hydrogen bond network within solvation layer differs from the one in bulk water, and it is the result of interactions of water molecules with protein surface. Altered geometry of the network reflects changes in the...
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Cadmium tri-tert-butoxysilanethiolates. Structural and spectroscopic models of metal sites in proteins.
PublicationW publikacji opisano syntezy i struktury dla dwóch heteroleptycznych kompleksów kadmu z rdzeniem CdS2NO2 i CdS2N2. Bis(tri-tert-butoksysilanotiolato)(1-metyloimidazol)kadmu(II) oraz bis(tri-tert-butoksysilanotiolato)bis(1-metyloimidazol)kadmu(II) współistnieją w roztworze chloroformu przy różnych stężeniach Bis(tri-tert-butoksysilanotiolanu) kadmu(II) i 1 metyloimidazolu. Rotzwór ten został scharakteryzowany za pomocą analizy spektralnej...
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Water-mediated long-range interactions between the internal vibrations of remote proteins
PublicationIt is generally acknowledged that the mobility of protein atoms and the mobility of water molecules in the solvation layer are connected. In this article, we answer the question whether a similar interdependence exists between the motions of atoms of proteins separated by the hydration layers of variable thickness. The system consisted of a kinesin catalytic domain and a tubulin dimer. It was studied using molecular dynamics simulations....
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The Characteristics of New SSB Proteins from Metagenomic Libraries and Their Use in Biotech Applications
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Differentially expressed proteins in the blood serum of piglets in response to a diet supplemented with inulin
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FT-Raman Spectroscopy as a Tool to Study the Secondary Structures of Wheat Gliadin Proteins
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Does Nitrogen Fertilization Affect the Secondary Structures of Gliadin Proteins in Hypoallergenic Wheat?
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Single-stranded DNA-binding proteins (SSBs) - sources and applicationsin molecular biology
PublicationBiałka wiążące się do jednoniciowego DNA (SSB) odgrywają ważną rolę w replikacji, rekombinacji i naprawie DNA u bakterii, archea i eukariota. Ostatnio wzrosło zainteresowanie białkami SSB jako przydatnymi narzędziami w metodach badawczych biologii molekularnej, analitycznych i diagnostycznych. Większość znanych prokariotycznych białek SSB zbudowanych jest z czterech podjednostek (homotetramer) z jedną domeną wiążąca (OB) jednoniciowe...
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Treatment of Hypertension in Patients 80 Years of Age or Older
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Effect of aeration of antibiotic-loaded bone cement on its properties and bactericidal effectiveness
PublicationBACKGROUND: Antibiotic-loaded bone cements are now widely used in medicine. They are able to locally deliver antibiotic particles and they allow treat or protect against infection. It is assumed that the bactericidal effectiveness of bioactive bone cements depend on the parameters of its production. Hence, the aim of this study was to check the effect of aeration of bone cement before mixing the components on its properties as...
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Experimental investigation of forced convection of water/EGAl2O3 nanofluids inside horizontal tube
PublicationIn this paper, forced convection of water/EG-Al2O3 nanofluids inside horizontal stainless steel tube is studied experimentally. As base fluid served water/EG mixture of two ratios (60:50 and 50:50). Nanoparticle mass concentrations was 0.1% or and 1%. Transition and turbulent flow regimes were tested. Average heat transfer coefficient and pressure drop values were determined for nanofluids and compared to base fluids. Deterioration...
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Tests for lapping of flat surfaces of ceramic elements with forced dosing of abrasive slurry
PublicationPrzedstawiono zagadnienia dotyczące systemu wymuszonego dawkowania zawiesiny ściernej w docieraniu jednotarczowym powierzchni płaskich. Opisano zalety takiego systemu dozowania płynnej zawiesiny ściernej. Omówiono wybrane wyniki badań docierania elementów z ceramiki technicznej. Analizowano wpływ podstawowych warunków dawkowania zawiesiny na ubytek liniowy próbek.
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Properties of Barium Cerate Thin Films Formed Using E-Beam Deposition
PublicationThis article focuses on the properties of the BaCeO3 thin films formed by electron-beam vapor deposition and investigates the formation of barium cerates on supports with different thermal expansion coefficients (Stainless Steel, Invar, Glass Sealing, and Inconel substrates) and the influence of the technological parameters on the properties of the formed thin films with an emphasis on the stability of the films. Morphology and...
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Weldability of Underwater Wet-Welded HSLA Steel: Effects of Electrode Hydrophobic Coatings
PublicationThe paper presents the effects of waterproof coatings use to cover electrodes on the weldability of high-strength, low-alloy (HSLA) steel in water. With the aim of improving the weldability of S460N HSLA steel in water, modifications of welding filler material were chosen. The surfaces of electrodes were covered by different hydrophobic substances. The aim of the controlled thermal severity (CTS) test was to check the influence...
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Synthesis and application of doxorubicin-loaded silica gels as solid materials for spectral analysis
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Synthesis and in vitro characterization of freeze-dried doxorubicin-loaded silica/PEG composite
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Experimental determination of dynamic properties of cylindrical steel tank model filled with liquid
PublicationIn technical branches, such as chemical or petroleum industries, cylindrical steel tanks are essential structures used for storage of liquid products. Any failure might have disastrous consequences, therefore their safety and reliability is essential. The aim of the present paper is to show the results of the experimental study which has been conducted on a scaled model of a real tank used in Poland. The investigation was carried...
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Wear and corrosion characteristics of the layers type (mn-p) formed on aluminium alloys
Publicationopisano multipleksową metodę wytwarzania warstw zawierających mangan i fosfor (mn-p) na stopach aluminium. przedstawiono wyniki badań mikrostruktury, właściwości tribologicznych i korozyjnych tych warstw. stwierdzono obecność tlenku manganu i fosforku manganu w wytworzonych warstwach oraz ich wysoką twardość, rzędu 1272 hv0,02. warstwy typu (mn-p) zmniejszają podatność stopu alsi13mg1cuni na korozję w 0,01 mh2so4.
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Rotational Molding of Linear Low-Density Polyethylene Composites Filled with Wheat Bran
PublicationApplication of lignocellulosic fillers in the manufacturing of wood polymer composites (WPCs) is a very popular trend of research, however it is still rarely observed in the case of rotational molding. The present study aimed to analyze the impact of wheat bran content (from 2.5 wt.% to 20 wt.%) on the performance of rotationally-molded composites based on a linear low-density polyethylene (LLDPE) matrix. Microscopic structure...
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Corrosion behavior of hydrogen charged super duplex stainless steel welded joints
PublicationThe electrochemical behavior of the weld metal, heat-affected zone (HAZ), and base material of super duplex stainless steel (SDSS) welded joints, made with the application of flux-cored arc welding (FCAW) and submerged arc welding (SAW), were investigated with the use of metallographic examinations (optical microscopy and scanning electron microscopy), potentiodynamic polarization measurements and total hydrogen content determination...
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Analysis of features of stainless steels in dissimilar welded joints in chloride inducted corrosion
PublicationStainless steels of femtic-austenitic microstructure that means the duplex Cr-Ni-Mo steels, in comparison with austenitic steel includes less expensive nickel and has much better mechanical properties with good formability and corrosion resistance, even in environments containing chloride ions. Similar share of high chromium ferrite and austenite, which is characterized by high ductility, determines that the duplex steels have...
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Failure of cold-formed beam: How does residual stress affect stability?
PublicationIn machine industry, stresses are often calculated using simple linear FEM analysis. Occasional failures of elements designed in such a way require recomputation by means of more sophisticated methods, eg. including plasticity and non-linear effects. It usually leads to investigation of failure causes and improvement of an element in order to prevent its unwanted behavior in the future. The study presents the case where both linear...
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Left-handed propagation characteristics of a dielectric and metal-loaded periodic circular waveguide
PublicationIn this paper, a periodic dielectric/metallic rod is located in a circular waveguide to obtain left-handed operation. Two geometries of the dielectric/metallic rod are proposed and examined. The dispersion characteristics of the investigated waveguides are obtained using a surface impedance model. Moreover, equivalent circuit models are proposed allowing for calculation of the dispersion characteristics and scattering parameters...
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Influence of geometric imperfections on capacities of silo structures loaded with pressure below atmospheric
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Mechanical and Physicochemical Properties of Newly Formed ZnO-PMMA Nanocomposites for Denture Bases
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Chitosan-protein scaffolds loaded with lysostaphin as potential antistaphylococcal wound dressing materials.
PublicationAIMS: The development of technology for preparing chitosan-protein scaffolds loaded with lysostaphin, which potentially could be used as dressing for wound treatment and soft tissue infections caused by Staphylococcus aureus. METHODS AND RESULTS: The unique technology of chitosan solubilization using gaseous CO(2) instead of organic or inorganic acids was used for the incorporation of lysostaphin, the enzyme that exhibits bactericidal...
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Isothiocyanates may chemically detoxify mutagenic amines formed in heat processed meat
PublicationMeat consumption represents a dietary risk factor increasing the incidence of common cancers, probably due to carcinogenic amines (HAAs) formed upon meat heating. Interestingly, cancers whose incidence is increased by meat consumption, are decreased in populations consuming brassica vegetables regularly. This inverse correlation is attributed to brassica anticarcinogenic components, especially isothiocyanates (ITCs) that stimulate...
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The Effect of Welding Conditions on Mechanical Properties of Superduplex Stainless Steel Welded Joints
PublicationThe tests results of superduplex stainless steel welded joints made with a different heat input, using automatic submerged arc welding (SAW) and semi-automatic flux-cored arc welding (FCAW) have been presented. Metallographic examinations, the measurements of the ferrite content, the width of the heat affected zone (HAZ) and the hardness of the welds in characteristic areas have been performed. Significant differences in the amount of...
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Effect of native air-formed oxidation on the corrosion behavior of AA7075 aluminum alloys
PublicationThe microstructure of aluminum alloys plays a key role in their corrosion resistance. In particular, the presence of intermetallic precipitates differing in the potential from the alloy matrix induces local corrosion. The study presents the effect of native air-formed oxidation on the corrosion behavior of AA 7075 aluminum alloy. Various microscopic and spectroscopic techniques were used to examine the changes occurring in the...
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Experimental investigation of forced convection of water-Al2O3 nanofluids inside horizontal tubes,
PublicationIn this paper, forced convection of water–Al2O3 nanofluids inside horizontal copper tube is studied experimentally. Experiments were conducted for three, i.e. 0.1%, 1% and 5% nanoparticle mass concentrations under transition and turbulent flow regimes. Average heat transfer coefficients and pressure drop values were determined and compared to distilled water. Enhancement of heat transfer for lower nanoparticle concentration and...
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Homoclinic orbits for an almost periodically forced singular Newtonian system in R^3
Publication. This work uses a variational approach to establish the existence of at least two homoclinic solutions for a family of singular Newtonian systems in R^3 which are subjected to almost periodic forcing in time variable
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Influence of geometric imperfections on capacities of silo structures loaded with pressure below atmospheric
PublicationPrzedstawiono probabilistyczną analizę nośności aluminiowego silosu ze wstępnymi imperfekcjami geometrycznymi obciążonego podciśnieniem. Imperfekcje opisano za pomocą dyskretnych odchyłek przyjętych zgodnie z maksymalnymi niedokładnościami dopuszczonymi przez normy. Ponadto wygenerowano imperfekcje płaszcza silosu, stosując jednorodne i niejednorodne pola losowe. Wykonano numeryczne obliczenia geometrycznie i materiałowo nieliniowe.
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Vibration surveillance for efficient milling of flexible details fixed in adjustable stiffness holder
PublicationThe paper presents the results of research related to the possibility of using an intelligent workpiece holder with adjustable stiffness, during end milling process. Machining a one side supported flexible workpiece will be performed with constant spindle speed and feed speed. In order to avoid hazardous vibration, stiffness of the especially designed spring (mounted in a workpiece holder) will be modified off-line. In order to...
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Standing Waves and Acoustic Heating (or Cooling) in Resonators Filled with Chemically Reacting Gas
PublicationStanding waves and acoustic heating in a one-dimensional resonator filled with chemically reacting gas, is the subject of investigation. The chemical reaction of A ! B type, which takes place in a gas, may be reversible or not. Governing equations for the sound and entropy mode which is generated in the field of sound are derived by use of a special mathematical method. Under some conditions, sound waves propagating in opposite...
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Cold Cracking Of Underwater Wet Welded S355G10+N High Strength Steel
PublicationWater as the welding environment determines some essential problems influencing steel weldability. Underwater welding of high strength steel joints causes increase susceptibility to cold cracking, which is an effect of much faster heat transfer from the weld area and presence of diffusible hydrogen causing increased metal fragility. The paper evaluates the susceptibility to cold cracking of the high strength S355G10+N steel used,...
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Scaffolds Loaded with Dialdehyde Chitosan and Collagen—Their Physico-Chemical Properties and Biological Assessment
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Experimental Study of the Rolling Friction Coefficient in Highly Loaded Supports of Rotary Kilns
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Processing of polymer‐derived, aerogel‐filled, SiC foams for high‐temperature insulation
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Influence of silver nanoparticles addition on antibacterial properties of PEO coatings formed on magnesium
PublicationMagnesium is a biodegradable material and thus could be a choice for bone fixation devices and implants with a specific purpose. This study aims to enhance the anti-corrosive, biocompatible, and antibacterial properties on magnesium-based materials through ceramic coatings formation. To achieve this the silicate-based electrolyte was used to create of Plasma Electrolytic Oxidation (PEO) coatings. During investigation the bioactive...
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Impact of Temperature and Nanoparticle Concentration on Turbulent Forced Convective Heat Transfer of Nanofluids
PublicationTheoretical analysis of the influence of nanoparticles and temperature on the average Nusselt (Nu) number and the average heat transfer coefficient (HTC) during the turbulent flow of nanofluid in a horizontal, round tube was carried out. The Nu number is a function of the Reynolds (Re) number and the Prandtl (Pr) number, which in turn are functions of the thermophysical properties of the liquid and the flow conditions. On the other...
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An investigation on residual stress and fatigue life assessment of T-shape welded joints
PublicationThis paper aims to quantitatively evaluate the residual stress and fatigue life of T-type welded joints with a multi-pass weld in different direction. The main research objectives of the experimental test were to test the residual stress by changing direction along with multiple wielding passes and determine the fatigue life of the welded joints. The result shows that compressive residual stress increases in the sample gradually...
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Experimental Investigations of Forced Convection of Nanofluids in Smooth, Horizontal, Round Tubes: A Review
PublicationA comprehensive review of published works dealing with experimental studies of forced convection heat transfer of nanofluids is presented. The survey is limited to straight, smooth, and round tubes. Moreover, only mono nanofluids exhibiting Newtonian behaviour are considered. Works on experimental research of forced convection in tubes are presented in a chronological order in the first part of the article. In this part, attention...
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Bulk synthesis of carbon-filled silicon carbide nanotubes with a narrow diameter distribution
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Silver filled single-wall carbon nanotubes—synthesis, structural and electronic properties
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Optical properties of a dielectric slab front-loaded with a grating of plasmonic silver nanowires
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