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Search results for: MEDICAL DATA AQUISITION
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Visual Attention Distribution Based Assessment of User's Skill in Electronic Medical Record Navigation
PublicationCurrently, the most precise way of reflecting the skills level is an expert’s subjective assessment. In this paper we investigate the possibility of the use of eye tracking data for scalar quantitative and objective assessment of medical staff competency in EMR system navigation. According to the experiment conducted by Yarbus the observation process of particular features is associated with thinking. Moreover, eye tracking is...
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ATOMIC DATA AND NUCLEAR DATA TABLES
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DEEP CONVOLUTIONAL NEURAL NETWORKS AS A DECISION SUPPORT TOOL IN MEDICAL PROBLEMS – MALIGNANT MELANOMA CASE STUDY
PublicationThe paper presents utilization of one of the latest tool from the group of Machine learning techniques, namely Deep Convolutional Neural Networks (CNN), in process of decision making in selected medical problems. After the survey of the most successful applications of CNN in solving medical problems, the paper focuses on the very difficult problem of automatic analyses of the skin lesions. The authors propose the CNN structure...
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Mariusz Kaczmarek dr hab. inż.
PeopleReceived M.Sc., Eng. in Electronics in 1995 from Gdansk University of Technology, Ph.D. in Medical Electronics in 2003 and habilitation in Biocybernetics and Biomedical Engineering in 2017. He was an investigator in about 13 projects receiving a number of awards, including four best papers, practical innovations (7 medals and awards) and also the Andronicos G. Kantsios Award and Siemens Award. Main research activities: the issues...
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Lessons learned in a decade: Medical‐toxicological view of tattooing
PublicationTattooing has been part of the human culture for thousands of years, yet only in the past decades has it entered the mainstream of the society. With the rise in popularity, tattoos also gained attention among researchers, with the aim to better understand the health risks posed by their application. 'A medical-toxicological view of tattooing'-a work published in The Lancet almost a decade ago, resulted from the international collaboration...
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A comprehensive evaluation of flexible FDM/FFF 3D printing filament as a potential material in medical application
PublicationThe use of FDM/FFF in 3D printing for medical sciences is becoming common. This is due to the high availability and decent price of both 3D printers and filaments useful for FDM/FFF. Currently, researchers' attention is focused mainly on the study of medical filaments based on PLA, PCL or their modifications. This contributes to insufficient diversity of medical-grade filaments on the market. Moreover, due to the lack of specified...
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Data in Brief
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Scientific Data
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Segmentation Quality Refinement in Large-Scale Medical Image Dataset with Crowd-Sourced Annotations
PublicationDeployment of different techniques of deep learning including Convolutional Neural Networks (CNN) in image classification systems has accomplished outstanding results. However, the advantages and potential impact of such a system can be completely negated if it does not reach a target accuracy. To achieve high classification accuracy with low variance in medical image classification system, there is needed the large size of the...
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Data Analysis in Bridge of Data
PublicationThe chapter presents the data analysis aspects of the Bridge of Data project. The software framework used, Jupyter, and its configuration are presented. The solution’s architecture, including the TRYTON supercomputer as the underlying infrastructure, is described. The use case templates provided by the Stat-reducer application are presented, including data analysis related to spatial points’ cloud-, audio- and wind-related research.
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Data Warehouses 2023/2024
e-Learning CoursesThe aim of the course is to familiarize students with the development process of data warehouses for BI systems. The course is prepared for students of Data Engineering.
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SZTUKA WIZUALNA W OBIEKTACH MEDYCZNYCH = VISUAL ARTS IN MEDICAL FACILITIES
PublicationWspółczesna architektura obiektów służby zdrowia podlega dynamicznym przeobrażeniom formalnym wynikającym zarówno z rozwoju technologii medycznych, zmian zachodzących w podejściu wobec pacjenta. Narastający w naukach medycznych kierunek holistyczny ustawia pacjenta jako użytkownika w trzech wymiarach: biologicznym, społecznym i psychologicznym. Stąd pojawiające się w procesie projektowym dotyczącym szpitali czy przychodni nowe...
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Proposal of a Mobile Medical Waste Incinerator with Application of Automatic Waste Feeder and Heat Recovery System as a Novelty in Poland
PublicationThe paper presents and discusses the issues of medical waste (including hazardous ones) and the problems regarding their proper management in Poland. Inappropriate handling of infectious medical waste directly endangers human health and the environment. Infectious waste must be properly disposed of—in practice, the only method of their disposal available in Poland is a thermal treatment in the incinerators tailored for this purpose....
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Data librarian and data steward – new tasks and responsibilities of academic libraries in the context of Open Research Data implementation in Poland
PublicationThesis/Objective – The policy of Open Access (OA) for researching resources in Europe has been implemented for more than 10 years. The first recommendations concerning providing OA to scientific materials were defined during the implementation of the 7th Framework Programme. Introducing another set of recommendations concerning OA to research data was the next stage. The recommendations were transformed into obligations under the...
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Data Mining 2022/2023
e-Learning CoursesThis is a web page for our course in Data Mining.
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Data Mining 2021/2022
e-Learning CoursesThis is a web page for our course in Data Mining.
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Analysis of Learning Outcomes in Medical Education with the Use of Fuzzy Logic
PublicationThe national curricula of the EU member states are structured around learning outcomes, selected according to Bloom’s Taxonomy. The authors of this paper claim that using Bloom’s Taxonomy to phrase learning outcomes in medical education in terms of students’ achievements is difficult and unclear. This paper presents an efficient method of assessing course learning outcomes using Fuzzy Logic.
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Qualitative data analysis methods
e-Learning CoursesThis is the continuation of Qualitatative Data Analysis Methods course provided online
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Harmony Search for Data Mining with Big Data
PublicationIn this paper, some harmony search algorithms have been proposed for data mining with big data. Three areas of big data processing have been studied to apply new metaheuristics. The first problem is related to MapReduce architecture that can be supported by a team of harmony search agents in grid infrastructure. The second dilemma involves development of harmony search in preprocessing of data series before data mining. Moreover,...
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Data Structures (Doctoral Studies)
e-Learning CoursesThe course covers basic data structures and computer algorithms used in information tehcnology applications.
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Data Mining Path
e-Learning CoursesWithin this path, various issues regarding data mining and their practical application in various systems are discussed. 4 semestr specjalności ISI i ZAD
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Data Warehouses DE 2022/2023
e-Learning CoursesThe aim of the course is to familiarize students with the development process of data warehouses for BI systems. The course is prepared for students of Data Engineering.
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Data Warehouses DE 2023/2024
e-Learning CoursesThe aim of the course is to familiarize students with the development process of data warehouses for BI systems. The course is prepared for students of Data Engineering.
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The Bridge of Data Project Objectives
PublicationOpen Research Data (ORD) is one of the emerging trends for researchers across the globe. However, it has to be stressed that the level of implementation and awareness of ORD varies between countries. Many initiatives have been created in Polish scientific institutions to support the process of opening publications. These are mainly Open Access (OA) repositories, implementing the so-called green road of OA. However, only a few universities...
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DATA JOURNALS AND DATA PAPERS IN VARIOUS RESEARCH AREAS AND SCIENTIFIC DISCIPLINES – BIBLIOMETRIC ANALYSIS BASED ON INCITES
PublicationThe main aim of this work is to provide insight into a bibliometric analysis of Data Journals and Data Papers in terms of research areas, disciplines, publication year and country. In particular, we calculated many bibliometric indicators, especially: the number of publications and citations. Furthermore, this work also investigated the top 20 journals in which scientists published the largest number of Data Papers. It was found...
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Algorithms and Data Structures 2022
e-Learning CoursesWETI, DS, Algorithms and Data Structures
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Quantitative Active Dynamic Thermal IR-Imaging and Thermal Tomography in Medical Diagnostic
PublicationPrinciples of Active dynamic thermal (ADT) IR-imaging and Thermal Tomography are described in details. Basic medical applications of this new modality are also discussed.
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Olfactory receptor-based biosensors as potential future tools in medical diagnosis
PublicationThe detection of biomarkers is the future of non-invasive medical diagnosis and screening. Discovery and identification of reliable disease specific volatile organic compounds is dependent on repeatable, accurate analysis of trace level gaseous analytes mainly in breath samples. Natural variety of the olfactory systems and the compounds capable of gas molecules binding creates wide possibilities of acquisition and implementation...
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BMJ-BRITISH MEDICAL JOURNAL
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Data Warehouses 2022/2023
e-Learning CoursesThe aim of the course is to familiarize students with the development process of data warehouses for BI systems. The course is prepared for students of Informatics - 5th semester.
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Technical physics (Data Engineering)
e-Learning CoursesField of study: Data Engineering; Subject name: Technical physics; Lecture notes and other course materials.
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The molecular entities in linked data dataset
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Data governance: Organizing data for trustworthy Artificial Intelligence
PublicationThe rise of Big, Open and Linked Data (BOLD) enables Big Data Algorithmic Systems (BDAS) which are often based on machine learning, neural networks and other forms of Artificial Intelligence (AI). As such systems are increasingly requested to make decisions that are consequential to individuals, communities and society at large, their failures cannot be tolerated, and they are subject to stringent regulatory and ethical requirements....
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SYNTHESIZING MEDICAL TERMS – QUALITY AND NATURALNESS OF THE DEEP TEXT-TO-SPEECH ALGORITHM
PublicationThe main purpose of this study is to develop a deep text-to-speech (TTS) algorithm designated for an embedded system device. First, a critical literature review of state-of-the-art speech synthesis deep models is provided. The algorithm implementation covers both hardware and algorithmic solutions. The algorithm is designed for use with the Raspberry Pi 4 board. 80 synthesized sentences were prepared based on medical and everyday...
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Technologia medyczna w obiektach świadczących usługi lecznicze- Medical technology in healthcare facilities
PublicationArchitektura budynków szpitalnych kreowana jest pod silnym wpływem wymagań sanitarno-higienicznych oraz wytycznych wynikających z charakteru świadczonych usług medycznych. Naczelną rolę odgrywa tu technologia medyczna, która jest zasobem wiedzy, procesów organizacyjnych i środków fizycznych uczestniczących w realizacji zdefiniowanych świadczeń zdrowotnych. Istotnym elementem takiej kreacji architektonicznej jest szereg procesów...
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Towards Safety Case Integration with Hazard Analysis for Medical Devices
PublicationSafety case is one of system safety lifecycle products and should be consistent with other lifecycle products like hazard analysis results. In this paper we present a method of safety case integration with hazard tables based on the use of parametrized argument patterns. We describe a hazard table metamodel, a safety argument pattern and a mechanism of pattern instantiation using a linking table which represents references to system...
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Support for research biobanks among medical students in the Republic of Kazakhstan
PublicationBackground: Over the past few years, several biobanks have been organized in the Republic of Kazakhstan (RoK). As research biobanks are becoming an increasingly important tool for precision medicine, they require competent biobankers who will help disseminate the idea of biobanking throughout the society and support donation for research purposes. This study aimed to assess the support for research...
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DATA INTEROPERABILITY AND THE OPEN DATA ECOSYSTEM: ROLES AND RESEARCH AREAS
PublicationSustainability and value-creation are considered important parameters to measure the success of an open data system. Unfortunately, existing open data systems are not meeting their promises to achieve a sustainable and value-based open data system. Van Loenen et al. (2021) proposed a sustainable and value-creating open data ecosystem. According to their study, the open data ecosystem needs to be user-driven, inclusive, circular,...
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Medical Image Segmentation Using Deep Semantic-based Methods: A Review of Techniques, Applications and Emerging Trends
PublicationSemantic-based segmentation (Semseg) methods play an essential part in medical imaging analysis to improve the diagnostic process. In Semseg technique, every pixel of an image is classified into an instance, where each class is corresponded by an instance. In particular, the semantic segmentation can be used by many medical experts in the domain of radiology, ophthalmologists, dermatologist, and image-guided radiotherapy. The authors...
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Databases (Data Engineering) - 2022
e-Learning CoursesThe course comprises basic and selected advanced issues of modern relational databases, including modelling, implementing and querying databases. It also refers to such important topics as normalization and transactional processing. The course is a necessary prerequisite to the Data Warehouses course.
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Databases (Data Engineering) - 2023
e-Learning CoursesThe course comprises basic and selected advanced issues of modern relational databases, including modelling, implementing and querying databases. It also refers to such important topics as normalization and transactional processing. The course is a necessary prerequisite to the Data Warehouses course.
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Databases (Data Engineering) - 2024
e-Learning CoursesThe course comprises basic and selected advanced issues of modern relational databases, including modelling, implementing and querying databases. It also refers to such important topics as normalization and transactional processing. The course is a necessary prerequisite to the Data Warehouses course.
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Leszek Pawłowski dr
PeopleDr Leszek Pawłowski, PhD, lawyer, assistant professor at the Department of Palliative Medicine, Medical University of Gdańsk (Poland), member of Polish Working Group on End-of-Life Ethics and Editorial Board member of the journal Palliative Medicine in Practice. His research is focused on legal issues in palliative care, hospice and palliative care volunteering, Advance Care Planning and medical law. He is involved in healthcare...
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Thermal Images Analysis Methods using Deep Learning Techniques for the Needs of Remote Medical Diagnostics
PublicationRemote medical diagnostic solutions have recently gained more importance due to global demographic shifts and play a key role in evaluation of health status during epidemic. Contactless estimation of vital signs with image processing techniques is especially important since it allows for obtaining health status without the use of additional sensors. Thermography enables us to reveal additional details, imperceptible in images acquired...
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A Mammography Data Management Application for Federated Learning
PublicationThis study aimed to develop and assess an application designed to enhance the management of a local client database consisting of mammographic images with a focus on ensuring that images are suitably and uniformly prepared for federated learning applications. The application supports a comprehensive approach, starting with a versatile image-loading function that supports DICOM files from various medical imaging devices and settings....
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Cluster donation: How medical students bound certain types of tissues and biomedical research and how it affects their willingness to donate.
PublicationAlthough biomedical research requires cooperation with a large number of donors, its success also depends on the input of healthcare professionals who play a crucial role in promoting biomedical research and influencing an individual’s decision to donate one’s biospecimens that are left over after a medical procedure. This work was aimed at investigating the correlation between medical and healthcare students’ willingness to...
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Polyurethanes modified with natural polymers for medical application. I. Polyurethanes/ Chitosan and polyurethane/collagen.
PublicationFor over three decades polyurethanes (PUR or PU) have been reported for application in a variety of medical devices. These polymers consist of hard and soft segments, which allow for more subtle control of their structure and properties. By varying the composition of the different segments, properties of PURcan be tuned up for use in many areas of medicine. Recently there is a great interest in modification of biomedical PUR with...
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Description logic based generator of data-centric applications
PublicationThe knowledge stored in Ontology Management Systems (OMS) that originally has the form of expressions, can be seen as a user application specification or as knowledge provided by an expert. The generator of applications discussed in this paper is defined as a program that automatically generates an application that meets a certain specification stored in OMS. It is shown that it is possible to build a user interface for data management...
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Description logic based generator of data-centric applications
PublicationThe knowledge stored in Ontology Management Systems (OMS) that originally has the form of expressions, can be seen as a user application specification or as knowledge provided by an expert. The generator of applications discussed in this paper is defined as a program that automatically generates an application that meets a certain specification stored in OMS. It is shown that it is possible to build a user interface for data management...
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Smart city and data management foundations
e-Learning CoursesThis e-learning course, specifically designed for individuals aiming to establish startups, those proficient in technology yet unsure of how to leverage and market it, and students aspiring to further their studies in data analysis, transportation, IT management, or data engineering. This course serves as an entry point for roles such as Smart City Specialist and Chief Data Officer in municipal settings. Participants will gain...