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Search results for: BIOPEP-UWM DATABASE
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Fragmentomic analysis of biopeptides in silico released from milk proteins
PublicationThe fragmentomic-assisted method was employed to predict the biological potential of peptides derived from milk proteins hydrolyzed by papain and bromelain. Firstly, protein sequences were acquired from the BIOPEP-UWM database and then hydrolyzed by the above enzymes using a BIOPEP-UWM tool called “Enzyme(s) action”. The released peptides were defined as parent peptides and further analyzed for the presence of shorter peptidic...
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Prediction of Bioactive Peptides From Chicken Feather and Pig Hair Keratins Using In Silico Analysis Based on Fragmentomic Approach
PublicationBackground: Keratin is among the most abundant structural proteins of animal origin, however it remains broadly underutilized. Objective: Bioinformatic investigation was performed to evaluate selected keratins originating from mass-produced waste products, i.e., chicken feathers and pig hair, as potential sources of bioactive peptides. Methods: Pepsin, trypsin, chymotrypsin, papain, and subtilisin were used for in silico keratinolysis...
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Analiza in silico bioaktywnych peptydów pochodzących z keratyny z piór drobiowych
PublicationKeratyna należy do najbardziej powszechnie występujących białek strukturalnych pochodzenia zwierzęcego. Stanowi ok. 90% masy piór wytwarzanych w dużych ilościach przez przemysł drobiarski. Ten odpadowy produkt pozostaje w dużym stopniu niezagospodarowany. Celem pracy była analiza bioinformatyczna pierwszorzędowej struktury keratyny z piór kurzych pod kątem występowania w niej peptydów bioaktywnych....
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Chicken feather keratin as a source of bioactive peptides useful in prevention of metabolic disorders – in silico and in vitro hydrolysis
PublicationProtein derived bioactive peptides not only serve as nutrients but can also exert drug-like activity, e.g. antidiabetic, antihypertensive, or antimicrobial, to name a few. Most biopeptides have beneficial effects on health that make them attractive for nutraceutical applications. The majority of bioactive peptides have been obtained from food proteins, but protein-rich by-products generated by agriculture...
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Photoelectron-photoabsorption (PePa) database
PublicationIn this paper a recently launched Photoelectron-Photoabsorption Database is presented. The database was developed in order to gather all the photoelectron and photoabsorption spectra measured by various collaborators over the years as well as to ease the access to the data to the potential users. In the paper the main features of the database were described and its outline explained.
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Database management systems - lecture 2024/2025
e-Learning CoursesKurs dedykowany do wykładów prowadzonych wspólnie dla przedmiotu Zarządzanie Systemami Baz Danych na kierunku Informatyka oraz Database management systems na kierunku inżynieria danych.
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FEEDB: A multimodal database of facial expressions and emotions
PublicationIn this paper a first version of a multimodal FEEDB database of facial expressions and emotions is presented. The database contains labeled RGB-D recordings of people expressing a specific set of expressions that have been recorded using Microsoft Kinect sensor. Such a database can be used for classifier training and testing in face recognition as well as in recognition of facial expressions and human emotions. Also initial experiences...
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On Facial Expressions and Emotions RGB-D Database
PublicationThe goal of this paper is to present the idea of creating reference database of RGB-D video recordings for recognition of facial expressions and emotions. Two different formats of the recordings used for creation of two versions of the database are described and compared using different criteria. Examples of first applications using databases are also presented to evaluate their usefulness.
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Remote Spatial Database Access in the Navigation System for the Blind
PublicationThe article presents the problem of a database access in the navigation systems. The authors were among the main creators of the prototype navigation system for the blind - “Voice Maps”. In the implemented prototype only exemplary, limited spatial data were used, therefore they could be stored in the mobile device’s memory without any difficulties. Currently the aforementioned system is being prepared for commercialization - the...
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SiMiSnoRNA: Collection of siRNA, miRNA, and snoRNA database for RNA Interference
PublicationObjective:The discovery of sequence specific gene silencing which occurs due to the presence of double-stranded RNAs has considerable impact on biology, revealing an unknown level of regulation of gene expression. This process is known as RNA interference (RNAi) or RNA silencing in which RNA molecules inhibit gene expression, typically by causing the destruction of specific mRNA molecule. Two types of small RNA molecules - small...
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An extension to the FEEDB Multimodal Database of Facial Expressions and Emotions
PublicationFEEDB is a multimodal database that contains recordings of people expressing different emotions, captured by using a Microsoft Kinect sensor. Data were originally provided in the device’s proprietary format (XED), requiring both the Microsoft Kinect Studio application and a Kinect sensor attached to the system to use the files. In this paper, we present an extension of the database. For a selection of recordings, we also provide...
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Thermal sequences database of the skin flaps in breast reconstruction and burns
PublicationThis paper presents a database of Active Dynamic Thermography (ADT) thermal sequences gathered throughout 6 year study on ADT application in skin flap blood perfusion monitoring and burn wounds diagnosis. For skin flap monitoring the database comprises of data collected during three different breast reconstruction procedures. The patients were monitored pre, intra and post surgically within 90 days period. The sequences were used...
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Thermal sequences database of the skin flaps in breast reconstruction and burns
PublicationThis paper presents a database of Active Dynamic Thermography (ADT) thermal sequences gathered throughout 6 year study on ADT application in skin flap blood perfusion monitoring and burn wounds diagnosis. For skin flap monitoring the database comprises of data collected during three different breast reconstruction procedures. The patients were monitored pre, intra and post surgically within 90 days period. The sequences were used...
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A microcomputer database design
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Database for integration of information in distributed data exchange system elements of Border Guard
PublicationThe paper presents the database solution for integration of information in distributed data exchange system elements of the Polish Border Guard. The proposed database solution is described in the context of data exchange system elements which control position and store identification data of vessels (fishing, sports and sailing boats) and other suspicious objects on the territorial sea, sea-coast and the internal sea-waters controlled...
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Kamila Kokot-Kanikuła mgr
PeopleKamila Kokot-Kanikuła is a digital media senior librarian at Gdańsk University of Technology (GUT) Library. She works in Digital Archive and Multimedia Creation Department and her main areas of interests include early printed books, digital libraries, Open Access and Open Science. In the Pomeranian Digital Library (PDL) Project she is responsible for creating annual digital plans, transferring files on digital platform, and promoting...
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The POCOBIO Database for Computed Scattering Cross-Sections for Positron Collisions with Biomolecular Systems
PublicationThe design of a database for positron interactions with biomolecular systems is outlined. The database contains only scattering cross sections, which are derived from theory. The data model is defined in a very flexible way, which facilitates the usage of weakly bound clusters of molecules and molecular systems with many tautomeric forms.
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POLISH PUBLISHERS OPEN ACCESS POLICIES DATABASE - FUNCTIONALITIES AND ROLE IN THE IMPLEMENTATION OF OPENNESS POLICIES
PublicationThe aim of the article is to present a base of Polish Publishers Open Access Policies as a tool supporting the scientific community in the implementation of openness policies. It is the first national platform to gather and analyze a publishing policy in the field of Open Access to Polish scientific journals. For scientists, it is a tool for searching for a Polish journal meeting certain criteria. It enables grant recipients to...
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DATABASE AND BIGDATA PROCESSING SYSTEM FOR ANALYSIS OF AIS MESSAGES IN THE NETBALTIC RESEARCH PROJECT
PublicationA specialized database and a software tool for graphical and numerical presentation of maritime measurement results has been designed and implemented as part of the research conducted under the netBaltic project (Internet over the Baltic Sea – the implementation of a multi-system, self-organizing broadband communications network over the sea for enhancing navigation safety through the development of e-navigation services.) The...
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GVC and wage dispersion. Firm-level evidence from employee-employer database
PublicationResearch background: Wage inequalities are still part of an interesting policy-oriented research area. Given the developments in international trade models (heterogeneity of firms) and increasing availability of micro-level data, more and more attention is paid to wage differences observed within and be-tween firms. Purpose of the article: The aim of the paper is to address the research gap concerning limited cross-country evidence...
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Combining Road Network Data from OpenStreetMap with an Authoritative Database
PublicationComputer modeling of road networks requires detailed and up-to-date dataset. This paper proposes a method of combining authoritative databases with OpenStreetMap (OSM) system. The complete route is established by finding paths in the graph constructed from partial data obtained from OSM. In order to correlate data from both sources, a method of coordinate conversion is proposed. The algorithm queries road data from OSM and provides...
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Database of speech and facial expressions recorded with optimized face motion capture settings
PublicationThe broad objective of the present research is the analysis of spoken English employing a multiplicity of modalities. An important stage of this process, discussed in the paper, is creating a database of speech accompanied with facial expressions. Recordings of speakers were made using an advanced system for capturing facial muscle motion. A brief historical outline, current applications, limitations and the ways of capturing face...
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Database Management Systems 2022/2023
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Database Management Systems 2023/2024
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Database Management Systems 2024/2025
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Querying the digital database of musical documents
PublicationW rozdziale zaprezentowano program Melody Explorer służący do formułowania zapytań dla bazy danych dokumentów muzycznych. Przedstawiono problemy związane z konwersją informacji wprowadzanych przez użytkownika na zapis nutowy. Zaproponowano ulepszenia istniejących rozwiązań mające na celu poprawę dokładności i stabilności systemu. Oprócz cyfrowego zapisu dźwięku również podany przez użytkownika rytm melodii wykorzystywany jest do...
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A Database Schema for the Analysis of Global Dynamics
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JOURNAL OF DATABASE MANAGEMENT
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A framework for accelerated optimization of antennas using design database and initial parameter set estimation
PublicationThe purpose of this paper is to exploit a database of pre-existing designs to accelerate parametric optimization of antenna structures is investigated. Design/methodology/approach The usefulness of pre-existing designs for rapid design of antennas is investigated. The proposed approach exploits the database existing antenna base designs to determine a good starting point for structure optimization and its response sensitivities....
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Internet database for photogrametric close range applications
PublicationPublikacja przedstawia koncepcję systemu informacyjnego przeznaczonego do gromadzenia, prezentowania i publikowania przez Internet numerycznych i cyfrowych wyników pomiarów fotogrametrycznych z różnych aplikacji fotogrametrycznych umożliwiających opracowania bliskiego zasięgu.
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Cooperative editing approach for building Wordnet database
PublicationArtykuł przedstawia podejście do kooperacyjnej pracy nad baza danych systemu Wordnet. Opisana została architektura systemu oraz wizualizacja sieci powiązań konceptualnych z użyciem komponentu touchgraph.
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Is database a necessary tool in research? Some historical facts
PublicationAutorzy rozważają argumenty za i przeciw używaniu baz danych w badaniach naukowych, a w szczególności w inżynierii. Wnioski z rozważań są jednoznaczne - bazy danych są dziś koniecznością, autorzy podają przykłady zastosowań i pomysły na nowe wdrożenia systemów bazodanowych
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A Database Schema for the Analysis of Global Dynamics of Multiparameter Systems
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Evaluation Methodology for Ship’s Planned Maintenance System Database
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Database systems for tomorrow: new challenges and research areas
PublicationZaprezentowano nowe obszary badawcze w dziedzinie baz danych, które będą rozwijane w najbliższej przyszłości. Omówiono takie obszary jak systemy typu ''Plug and Play'', duże systemy sfederowane, nowe architektury systemów baz danych oparte na dużych buforach pamięciowych, integracja danych i aplikacji oraz bazy danych semistrukturalnych.
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Syntactic modular decomposition of large ontologies with relational database
PublicationSupport for modularity allows complex ontologies to be separated into smaller pieces (modules) that are easier to maintain and compute. Instead of considering the entire complex ontology, users may benefit more by starting from a problem-specific set of concepts (signature of problem) from the ontology and exploring its surrounding logical modules. Additionally, an ontology modularization mechanism allows for the splitting up of...
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Cochrane Database of Systematic Reviews
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ACM TRANSACTIONS ON DATABASE SYSTEMS
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Testing of the evaluation methodology for Ship's Planned Maintenance System Database
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The atlas of inequality aversion: theory and empirical evidence on 55 countries from the Luxembourg Income Study database
PublicationResearch background: In the distributive analysis, the constant relative inequality aversion utility function is a standard tool for ethical judgements of income distributions. The sole parameter ε of this function expresses a society’s aversion to inequality. However, the profession has not committed to the range of ε. When assessing inequality and other welfare characteristics, analysts assume an arbitrary level of ε, common...
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SoundShape - Headphone Transfer Function database
Open Research DataThis publication introduces the SoundShape database, which contains closed-ear headphone transfer functions (HpTF) for fifteen headphone models. Several models included in this database are also found in other well-known databases, such as Virtuoso and Binaural Decoders. However, for some models found in the literature, HpTF filters were unavailable,...
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Creating a radiological database for automatic liver segmentation using artificial intelligence.
PublicationImaging in medicine is an irreplaceable stage in the diagnosis and treatment of cancer. The subsequent therapeutic effect depends on the quality of the imaging tests performed. In recent years we have been observing the evolution of 2D to 3D imaging for many medical fields, including oncological surgery. The aim of the study is to present a method of selection of radiological imaging tests for learning neural networks.
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Expedited Acquisition of Database Designs for Reduced-Cost Performance-Driven Modeling and Rapid Dimension Scaling of Antenna Structures
PublicationFast replacement models have been playing an increasing role in high-frequency electronics, including the design of antenna structures. Their role is to improve computational efficiency of the procedures that normally entail large numbers of expensive full-wave electromagnetic (EM) simulations, e.g., parametric optimization or uncertainty quantification. Recently introduced performance-driven modeling methods, such as the nested...
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Database-The Journal of Biological Databases and Curation
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International Journal of Database Theory and Application
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Shipowner’s Impact on Planned Maintenance System Database Quality Grades Resemblance Equalization
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Database of the thermal ablation model
Open Research DataThermal ablation is a low invasive technique which eliminates cancerous tissue using high temperature. The presented database was used to show the temperature distribution for t=600[s] in two cases: when the value of the thermal conductivity of tissue k(x;T) is constant and for the variable k(x;T). In addition, using these data we showed the difference...
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Affymetrix Chip Definition Files Construction Based on Custom Probe Set Annotation Database
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New Content Based Image Retrieval database structure using Query by Approximate Shapes
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Clinical situations text database for Polish language
Open Research DataDataset contains a database of anonymized texts in Polish for the purposes of building a medical speech corpus, for clinical situations in the following areas: medical interview, interview and description of the result of an oncological examination, description of a radiological examination, description of a pathomorphological examination, description...