Filters
total: 3704
-
Catalog
- Publications 3197 available results
- Journals 132 available results
- Conferences 22 available results
- Publishing Houses 1 available results
- People 66 available results
- Projects 1 available results
- e-Learning Courses 71 available results
- Events 1 available results
- Open Research Data 213 available results
displaying 1000 best results Help
Search results for: BIOPHYSICAL TECHNIQUES
-
European Congress on Intelligent Techniques and Soft Computing
Conferences -
Non-intrusive infrared-free eye tracking method
PublicationIn the paper a technique of eye tracking based on visible light is presented. The approach described does not require an additional hardware equipment used in the infrared eye tracking system. First, examples of existing eye tracking techniques were presented. Then, the proposed algorithm of image processing and the process of determining the eye position are described. The engineered eye tracking application was tested and the...
-
Resilience of 5G Mobile Communication Systems to Massive Disruptions
PublicationThis chapter discusses vital techniques to enhance the resilience of 5G systems. It starts with dependability assessment of 5G networks. Next, it describes (a) the frequency fallback technique to improve availability and survivability of 5G services, (b) segment interleaving scheme to enhance communications resilience between base stations and the remaining part of the network and (c) multi-operator protection to address the resilience...
-
Sequence-dependent structural properties of B-DNA: what have we learned in 40 years?
PublicationThe structure of B-DNA, the physiological form of the DNA molecule, has been a central topic in biology, chemistry and physics. Far from uniform and rigid, the double helix was revealed as a flexible and structurally polymorphic molecule. Conformational changes that lead to local and global changes in the helix geometry are mediated by a complex choreography of base and backbone rearrangements affecting the ability of the B-DNA...
-
Amyloid fibril formation in the presence of water structure-affecting solutes
PublicationThe impact of the differently hydrated non-electrolytes (protein structure destabilizers) on the fibrillation of hen egg white lysozyme (HEWL) was investigated. Two isomeric urea derivatives i.e. butylurea (BU) and N,N,N′,N′-tetramethylurea (TMU) were chosen as a tested compounds. The obtained results show that butylurea exerts greater impact on HEWL and its fibrillation than tetramethylurea. Both substances decrease the time of...
-
Molecular Determinants of Proton Transfer in ATP Synthase FO Complex
Publication -
Generalization of the Elastic Network Model for the Study of Large Conformational Changes in Proteins
Publication -
On the mechanism of nitrobenzene liquid membrane oscillators containing hexadecyltrimethylammonium bromide
PublicationBadano oscylacje różnicy potencjałów elektrycznych między fazami wodnymi oscylatora z membraną ciekłą, zawierającego kwas pikrynowy rozpuszczony w nitrobezenie. Wodnej fazie donorowej znajdował się kationowy surfaktant, zaś faza akceptorowa składała się z wodnego roztworu sacharozy. Zaproponowano mechanizm oscylacji składajacy się z trzech etapów. Zaproponowano procesy zachodzące w każdym etapie. Stwierdzono, że procesy adsorpcji...
-
Molecular modeling of amphotericin B - ergosterol primary complex in water II
PublicationPrezentowane badania dotyczą oddziaływania antybiotyku polienowego anfoterycyny B (AmB) i ergosterolu (ERG) (typowego sterolu błonowego komórek grzybowych) na poziomie molekularnym. W odróżnieniu od badanego poprzednio kompleksu binarnego analizowany obecnie kompleks AnB/ERG/AmB charakteryzuje się zdecydowanie wiekszą stabilnością i wzglednie sztywną, sandwiczową geometrią. Za trwałość i geometrie kompleksu odpowiedzialne są oddziaływania...
-
Influence of a lipid bilayer on the conformational behavior of amphotericin B derivatives - A molecular dynamics study.
PublicationAmphotericin B (AmB) is an effective but very toxic antifungal antibiotic. In our laboratory a series of AmB derivatives of improved selectivity of action was synthesized and tested. To understand molecular basis of this improvement, comparative conformational studies of amphotericin B and its two more selectivederivatives were carried out in an aqueous solution and in a lipid membrane. These molecular simulation studies revealed...
-
Protochlorophyllide in model systems — An approach to in vivo conditions
Publication -
Molecular organization of antifungal antibiotic amphotericin B in lipid monolayers studied by means of Fluorescence Lifetime Imaging Microscopy
Publication -
Syntheses and DNA binding of new cationic porphyrin–tetrapeptide conjugates
Publication -
Binding of new cationic porphyrin–tetrapeptide conjugates to nucleoprotein complexes
Publication -
Arbidol targeting influenza virus A Hemagglutinin; A comparative study
Publication -
Extension of the Force Matching Method to Anisotropic Coarse-Grained Transferable Force Fields: Application to the Unres Model of Proteins
Publication -
Extension of the Unres Package for Physics-Based Coarse-Grained Simulations of Proteins and Protein Complexes to Very Large Systems
Publication -
Molecular simulation study of cooperativity in hydrophobic association: clusters of four hydrophobic particles
Publication -
Erratum to “Molecular simulation study of cooperativity in hydrophobic association: clusters of four hydrophobic particles” [Biophys. Chem. 105 (2003) 339–359]
Publication -
NMR studies of new arginine vasopressin analogs modified with α-2-indanylglycine enantiomers at position 2 bound to sodium dodecyl sulfate micelles
Publication -
Organic solvents aggregating and shaping structural folding of protein, a case study of the protease enzyme
PublicationLow solubility of reactants or products in aqueous solutions can result in the enzymatic catalytic reactions that can occur in non-aqueous solutions. In current study we investigated aqueous solutions containing different organic solvents / deep eutectic solvents (DESs) that can influence the protease enzyme's activity, structural, and thermal stabilities. Retroviral aspartic protease enzyme is responsible for the cleavage of the...
-
The Effect of Sterols on Amphotericin B Self-Aggregation in a Lipid Bilayer as Revealed by Free Energy Simulations
PublicationAmphotericin B (AmB) is an effective but toxic antifungal drug, known to increase the permeability of the cell membrane, presumably by assembling into transmembrane pores in a sterol-dependent manner. The aggregation of AmB molecules in a phospholipid bilayer is, thus, crucial for the drug’s activity. To provide an insight into the molecular nature of this process, here, we report an atomistic molecular dynamics simulation study...
-
Silica In Silico: A Molecular Dynamics Characterization of the Early Stages of Protein Embedding for Atom Probe Tomography
PublicationA novel procedure for the application of atom probe tomography (APT) to the structural analysis of biological systems, has been recently proposed, whereby the specimen is embedded by a silica matrix and ablated by a pulsed laser source. Such a technique, requires that the silica primer be properly inert and bio-compatible, keeping the native structural features of the system at hand, while condensing into an amorphous, glass-like...
-
Molecular modelling of amphotericin B-ergosterol primary complex in water
PublicationBadano właściwości pierwotnego kompleksu amfoterycyny B z ergosterolem przy pomocy symulacji dynamiki molekularnej. Otrzymane w wyniku naszych symulacji rezultaty słabo odpowiadają postulowanym przez innych autorów modelom kompleksu antybiotyk-sterol. Z drugiej strony uzyskane geometrie nie są sprzeczne z wynikami eksperymentów biofizycznych dotyczących powstawania kompleksów w wodzie i w środowisku wodno-alkoholowym.
-
Lateral diffusion coefficients in membranes measured by resonance energy transfer and a new algorithm for diffusion in two dimentions
PublicationOpisano wyniki pomiarów współczynników dyfuzji w membranach przy wykorzystaniu rezonansowego przekazywania energii wzbudzania. Donorem był kompleks metaloorganiczny renu o czasie życia ok. 3ćs, co pozwalało na pomiary współczynników dyfuzji mniejszych od 10 cm2/s. Zmierzono współczynniki dyfuzji w membranach typu DMPG i DOPC w różnych temperaturach.
-
Spiral Search Grasshopper Features Selection with VGG19-ResNet50 for Remote Sensing Object Detection
PublicationRemote sensing object detection plays a major role in satellite imaging and is required in various scenarios such as transportation, forestry, and the ocean. Deep learning techniques provide efficient performance in remote sensing object detection. The existing techniques have the limitations of data imbalance, overfitting, and lower efficiency in detecting small objects. This research proposes the spiral search grasshopper (SSG)...
-
IEEE 802.15.4a Impulse Radio Spectrum Shaping by Changes in Pulse Sequence
PublicationThis paper presents one of possible techniques of IEEE 802.15.4a ultra-wideband signal spectrum control, based on changes in sequences of transmitted pulses with very short duration time. This technique can reduce probability of mutual interferences between new ultra-wideband and existing narrowband devices, which may be helpful in further studies on allowing UWB transmission in wider range of spectrum in theEuropean Union.
-
Ryszard Jan Barczyński dr hab. inż.
PeopleRyszard Jan Barczyński (b. 24 June 1957 in Gdańsk), Polish scientist, engineer, a specialist in solid state physics and electronic measurement techniques. In 1976, he obtained a high school diploma in the IV High School Tadeusz Kosciuszko in Torun. Higher education he graduated in 1981 at the Institute of Physics, Technical University of Gdansk in specialty of solid state physics, obtaining master's degree in engineering. Since...
-
Application of Passive Samplers in Monitoring of Organic Constituents of Air
PublicationThe principles of passive dosimetry, which has been known for over 100 years, are finding an ever increasing use in analytical practice and are being used as a convenient technique for isolation and enrichment of analytes from various environmental media. Due to its simplicity, a variety of designs, as well as the possibility of using a number of different final determination techniques, passive dosimetry has been applied in...
-
Novel Analytical Techniques, GT
e-Learning Courses -
Separation techniques 2024/25
e-Learning CoursesSeparation techniques in modern chemical analysis form the basis of most compound separation and identification processes. Their task is to selectively isolate elements or chemical substances from complex mixtures and thus determine their type and quantity. In addition to analytical applications, separation techniques are now also used in preparative processes to isolate large quantities of individual substances. The course will...
-
NOVEL ANALYTICAL TECHNIQUES seminars
e-Learning CoursesStudents will gain theexperience how to presents the knowledge in the range of analysis and monitoring of pullutants.
-
Two tests for adhesive bonding long term characterization: principles and applications
PublicationThis article describes recent refinement of the traditional wedge test technique used to characterize durability of the adhesive joints. We propose two types of measuring protocols to monitor precisely and continuously the propagation of an "effective" crack during long term mode I fracture mechanic test. First method is directly derived from the traditional wedge test technique and consist in monitoring the surface strain of adherent...
-
Modern Techniques in Control Theory
e-Learning Courses -
Tomasz Edward Berezowski dr inż.
PeopleHe was born in 1986 in Warsaw. He graduated in 2009 with honors from the Interfaculty Study of Environmental Protection at SGGW in Warsaw, specialty Restoration and Management of Environment. He defended his doctorate with honors at Vrije UIniversiteit Brussels in 2015. In 2015-2017 he worked as an assistant and then assistant professor at the Faculty of Civil and Environmental Engineering at SGGW. In 2017, he was employed as an...
-
Novel Nonlinear High Order Technologies for Damage Diagnosis of Complex Assets
PublicationFor the first time worldwide, innovative techniques, generic non-linear higher-order unnormalized cross-correlations of spectral moduli, for the diagnosis of complex assets, are proposed. The normalization of the proposed techniques is based on the absolute central moments, that have been proposed and widely investigated in mathematical works. The existing higher-order, crosscovariances of complex spectral components are not sufficiently...
-
IMPEDANCE MEASUREMENT MODULE FOR GAS SENSORS WITH TEMPERATURE CONDITIONING FEATURE
PublicationThe paper presents an impedance measurement module which is aimed for gas sensor. Sensor’s heater temperature conditioning and modulation feature is available in order to allow implementation of different techniques improving selectivity and sensitivity of gas sensors. The measurement module uses three-parameter sine-fitting technique for impedance measurement. To monitor sensor temperature, the resistance of the sensor’s heater...
-
Efficiency of linear and non-linear classifiers for gas identification from electrocatalytic gas sensor
PublicationElectrocatalytic gas sensors belong to the family of electrochemical solid state sensors. Their responses are acquired in the form of I-V plots as a result of application of cyclic voltammetry technique. In order to obtain information about the type of measured gas the multivariate data analysis and pattern classification techniques can be employed. However, there is a lack of information in literature about application of such...
-
Adaptive CAD-Model Construction Schemes
PublicationTwo advanced surrogate model construction techniques are discussed in this paper. The models employ radial basis function (RBF)interpolation scheme or artificial neural networks (ANN) with a new training algorithm. Adaptive sampling technique is applied withrespect to all variables. Histograms showing the quality of the models are presented. While the quality of RBF models is satisfactory, theperformance of the ANN models obtained...
-
Konzepte zur Energieeffizienzsteigerung bei Internet-Zugangsgeräten
PublicationThe key issue of this paper is the power management of Internet access devices. The paper commences with an outline on the energy consumption of today's IT devices. It is followed by a description of options to increase energy efficiency of computers. The paper proves that in practice network cards and other IT network components, such as modems, network access points, switches and routers have the maximum energy consumption -...
-
Dawid Zieliński dr inż.
PeopleDawid Zieliński uzyskał tytuł magistra inżyniera w 2017 roku na Wydziale Mechanicznych Politechniki Gdańskiej, kończąc kierunek: Mechanika i Budowa Maszyn, specjalność: Technologia Maszyn i Komputerowe Wspomaganie Produkcji. W okresie 2016-17 studiował na Uniwersytecie Technicznym w Berlinie (Technische Universität Berlin – TU Berlin) oraz pracował w instytucie naukowym – Institut für Werkzeugmaschinen und Fabrikbetrieb (IWF) Technische...
-
Determination of authenticity of brand perfume using electronic nose prototypes
PublicationThe paper presents practical application of an electronic nose technique for fast and efficient discrimination between authentic and fake perfume samples. Two self-built electronic nose prototypes equipped with a set of semiconductor sensors were employed for that purpose. Additionally 10 volunteers took part in sensory analysis. The following perfumes and their fake counterparts were analysed: Dior – Fahrenheit, Eisenberg – J’ose,...
-
Introduction to MIP synthesis, characteristics and analytical application
PublicationOne of the trends in analytical chemistry is associated with designing and developing new types of sample preparation techniques, which might significantly increase the efficiency and selectivity of the analytes isolation or/and preconcentration process. One of the most widely employed solutions are selective sorption materials, defined as molecularly imprinted polymers (MIPs), as well as the sorbents with the molecular fingerprint....
-
Solid phase microextraction: state of the art, opportunities and applications
PublicationSolid phase microextraction is one of the most popular green techniques used for sample preparations in analytical chemistry. It is a simple, rapid, sensitive, and solvent-free technique. Since SPME was first introduced in the early 1990s, there has been an intensification of research in order to elaborate new methodical solutions in many research facilities around the world, which could increase the use of this technique. More...
-
Formal Techniques in Real-Time and Fault Tolerant Systems
Conferences -
International Conference on Parallel and Distributed Processing Techniques and Applications
Conferences -
International Conference on Advances in Pattern Recognition and Digital Techniques
Conferences -
TRANSPORT POSSIBILITY FOR MPEG-4/AVC- AND MPEG-2-ENCODED VIDEO DATA IN IPTV: A COMPARISON STUDY
PublicationIPTV (Television over IP) is a modern service with a great potential to expand. It uses the IP transport platform, that is already in worldwide operation. At the time of writing, two techniques are used to transport the video and audio data of IPTV: MPEG-2 TS and Native RTP. The two techniques quite definitely have an influence on both quality of service (QoS) and quality of experience (QoE). This paper sets out to demonstrate...
-
An insight into craft activities in rural areas of Dalmatia province - first data on iron working at the Roman settlement in Lopar (Island of Rab)
PublicationWithin multidisciplinary research carried out at Podšilo bay in Lopar on the island of Rab (north-eastern Adriatic), on the bases of movable finds and, possibly, geophysical measurements, evidence of ironworking has been detected within a Roman rural site where ceramic building materials production was ascertained before. Preliminary analyses of several samples of slug, iron objects and nearby collected minerals support the...
-
Principles and Developments of Solid-Phase Microextraction
PublicationSample preparation has been commonly considered a critical step of the analytical process. In this sense, remarkable efforts have been made to develop efficient sample preparation techniques which could overcome the limitations of conventional approaches. Since its inception in the early 1990’s, solid-phase microextraction (SPME) has become a widespread miniaturized sample preparation technique for extraction and preconcentration...