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Wyniki wyszukiwania dla: NEONATAL PARALLELS
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Minimizing Distribution and Data Loading Overheads in Parallel Training of DNN Acoustic Models with Frequent Parameter Averaging
PublikacjaIn the paper we investigate the performance of parallel deep neural network training with parameter averaging for acoustic modeling in Kaldi, a popular automatic speech recognition toolkit. We describe experiments based on training a recurrent neural network with 4 layers of 800 LSTM hidden states on a 100-hour corpora of annotated Polish speech data. We propose a MPI-based modification of the training program which minimizes the...
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A Fail-Safe NVRAM Based Mechanism for Efficient Creation and Recovery of Data Copies in Parallel MPI Applications
PublikacjaThe paper presents a fail-safe NVRAM based mechanism for creation and recovery of data copies during parallel MPI application runtime. Specifically, we target a cluster environment in which each node has an NVRAM installed in it. Our previously developed extension to the MPI I/O API can take advantage of NVRAM regions in order to provide an NVRAM based cache like mechanism to significantly speed up I/O operations and allow to preload...
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Investigation of Parallel Data Processing Using Hybrid High Performance CPU + GPU Systems and CUDA Streams
PublikacjaThe paper investigates parallel data processing in a hybrid CPU+GPU(s) system using multiple CUDA streams for overlapping communication and computations. This is crucial for efficient processing of data, in particular incoming data stream processing that would naturally be forwarded using multiple CUDA streams to GPUs. Performance is evaluated for various compute time to host-device communication time ratios, numbers of CUDA streams,...
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Efficient parallel implementation of crowd simulation using a hybrid CPU+GPU high performance computing system
PublikacjaIn the paper we present a modern efficient parallel OpenMP+CUDA implementation of crowd simulation for hybrid CPU+GPU systems and demonstrate its higher performance over CPU-only and GPU-only implementations for several problem sizes including 10 000, 50 000, 100 000, 500 000 and 1 000 000 agents. We show how performance varies for various tile sizes and what CPU–GPU load balancing settings shall be preferred for various domain...
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Mechanism of recognition of parallel G-quadruplexes by DEAH/RHAU helicase DHX36 explored by molecular dynamics simulations
PublikacjaBecause of high stability and slow unfolding rates of G-quadruplexes (G4), cells have evolved specialized helicases that disrupt these non-canonical DNA and RNA structures in an ATP-dependent manner. One example is DHX36, a DEAH-box helicase, which participates in gene expression and replication by recognizing and unwinding parallel G4s. Here, we studied the molecular basis for the high affinity and specificity of DHX36 for parallel-type...
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Wrodzone zwężenie zastawki aortalnej - wyniki leczenia operacyjnego i interwencyjnego, z wykluczeniem krytycznej stenozy aortalnej noworodkowej = Congenitial aortic stenosis - outcomes after surgical treatment and baloon dilatation with exclusion of neonatal critical congenitial aortic stenosis
PublikacjaOdległe wyniki leczenia wrodzonego zwężenia zastawki aortalnej są ważnym problemem medycznym. Celem pracy była ocena wyników postępowania zabiegowego u dzieci z wrodzonym zwężeniem zastawki aortalnej.
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Parallel Processing Letters
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Molecular Simulations Using Boltzmann’s Thermally Activated Diffusion - Implementation on ARUZ – Massively-parallel FPGA-based Machine
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Analyzing energy/performance trade-offs with power capping for parallel applications on modern multi and many core processors
PublikacjaIn the paper we present extensive results from analyzing energy/performance trade-offs with power capping observed on four different modern CPUs, for three different parallel applications such as 2D heat distribution, numerical integration and Fast Fourier Transform. The CPU tested represent both multi-core type CPUs such as Intel⃝R Xeon⃝R E5, desktop and mobile i7 as well as many-core Intel⃝R Xeon PhiTM x200 but also server, desktop...
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Infrared techniques for natural convection investigations in channels between two vertical, parallel, isothermal and symmetrically heated plates
PublikacjaThe effect of the gap width between two symmetrically heated vertical, parallel, isothermal plates on intensity of natural convective heat transfer in a gas (Pr = 0.71) was experimentally studied using the balance and gradient methods. In the former method heat fluxes were determined based on measurements of the voltage and electric current supplying the heaters placed inside the walls. In the latter, heat fluxes were calculated...
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Performance evaluation of Unified Memory with prefetching and oversubscription for selected parallel CUDA applications on NVIDIA Pascal and Volta GPUs
PublikacjaThe paper presents assessment of Unified Memory performance with data prefetching and memory oversubscription. Several versions of code are used with: standard memory management, standard Unified Memory and optimized Unified Memory with programmer-assisted data prefetching. Evaluation of execution times is provided for four applications: Sobel and image rotation filters, stream image processing and computational fluid dynamic simulation,...
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Low-Power Receivers for Wireless Capacitive Coupling Transmission in 3-D-Integrated Massively Parallel CMOS Imager
PublikacjaThe paper presents pixel receivers for massively parallel transmission of video signal between capacitive coupled integrated circuits (ICs). The receivers meet the key requirements for massively parallel transmission, namely low-power consumption below a single μW, small area of less than 205 μm2, high sensitivity better than 160 mV, and good immunity to crosstalk. The receivers were implemented and measured in a 3-D IC (two face-to-face...
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Auto-tuning methodology for configuration and application parameters of hybrid CPU + GPU parallel systems based on expert knowledge
PublikacjaAuto-tuning of configuration and application param- eters allows to achieve significant performance gains in many contemporary compute-intensive applications. Feasible search spaces of parameters tend to become too big to allow for exhaustive search in the auto-tuning process. Expert knowledge about the utilized computing systems becomes useful to prune the search space and new methodologies are needed in the face of emerging heterogeneous...
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Effective configuration of a double triad planar parallel manipulator for precise positioning of heavy details during their assembling process
PublikacjaIn the paper, dynamics analysis of a parallel manipulator is presented. It is an atypical manipulator, devoted to help in assembling of heavy industrial constructions. Few atypical properties are required: small workspace; slow velocities; high loads. Initially, a short discussion about definition of the parallel manipulators is presented, as well as the sketch of the proposed structure. In parallel, some definitions, assumptions...
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Insight into heart regeneration
PublikacjaThe mammalian heart is thought to be incapable of regeneration because of the limited ability of cardiomyocytes. to proliferate. However, it has been recently shown that the neonatal murine heart is able to restore its normal function after coronary artery ligation or even partial resection. Unfortunately, this feature is lost in a few days after birth, although lower vertebrates as zebrafish or newt, retain this ability until adulthood. Therefore,...
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Improved conformational space annealing method to treat β-structure with the UNRES force-field and to enhance scalability of parallel implementation
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Benchmarking Performance of a Hybrid Intel Xeon/Xeon Phi System for Parallel Computation of Similarity Measures Between Large Vectors
PublikacjaThe paper deals with parallelization of computing similarity measures between large vectors. Such computations are important components within many applications and consequently are of high importance. Rather than focusing on optimization of the algorithm itself, assuming specific measures, the paper assumes a general scheme for finding similarity measures for all pairs of vectors and investigates optimizations for scalability...
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Air Pollution Research Based on Spider Web and Parallel Continuous Particulate Monitoring—A Comparison Study Coupled with Identification of Sources
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Adaptive system for recognition of sounds indicating threats to security of people and property employing parallel processing of audio data streams
PublikacjaA system for recognition of threatening acoustic events employing parallel processing on a supercomputing cluster is featured. The methods for detection, parameterization and classication of acoustic events are introduced. The recognition engine is based onthreshold-based detection with adaptive threshold and Support Vector Machine classifcation. Spectral, temporal and mel-frequency descriptors are used as signal features. The...
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Optimization of hybrid parallel application execution in heterogeneous high performance computing systems considering execution time and power consumption
PublikacjaMany important computational problems require utilization of high performance computing (HPC) systems that consist of multi-level structures combining higher and higher numbers of devices with various characteristics. Utilizing full power of such systems requires programming parallel applications that are hybrid in two meanings: they can utilize parallelism on multiple levels at the same time and combine together programming interfaces...
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Checkpointing of Parallel MPI Applications using MPI One-sided API with Support for Byte-addressable Non-volatile RAM
PublikacjaThe increasing size of computational clusters results in an increasing probability of failures, which in turn requires application checkpointing in order to survive those failures. Traditional checkpointing requires data to be copied from application memory into persistent storage medium, which increases application execution time as it is usually done in a separate step. In this paper we propose to use emerging byte-addressable...
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On possible lowering fuel oil consumption by differentiating loads on ship diesel engines running in parrallel.
PublikacjaPodano możliwości zmniejszenia zużycia paliwa przez silniki okrętowe pracujące równolegle dzieki różnicowaniu ich obciążeń eksploatacyjnych. Zaprezentowano podstawy teoretyczne oraz sposób postępowania przy pomiarach zużycia paliwa w czasie rzeczywistym.
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Redundantly Actuated 3RRR Parallel Planar Manipulator - Numerical Analyses of its Dynamics Sensitivity on Modifications of its Platform’s Inertia Parameters
PublikacjaIn the paper, numerical analyses, as well as dynamics of a complex mechanism, are presented. Two objectives are crucial for the paper: inverse dynamic model is needed (dedicated to be use in the model predictive controller); an identification method is searched (some trajectory parameters are controlled, when specific trajectory is tracked under an open-loop model-based control), as selected parameters must be identified for the...
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Massively parallel linear-scaling Hartree–Fock exchange and hybrid exchange–correlation functionals with plane wave basis set accuracy
PublikacjaWe extend our linear-scaling approach for the calculation of Hartree–Fock exchange energy using localized in situ optimized orbitals [Dziedzic et al., J. Chem. Phys. 139, 214103 (2013)] to leverage massive parallelism. Our approach has been implemented in the ONETEP (Order-N Electronic Total Energy Package) density functional theory framework, which employs a basis of non-orthogonal generalized Wannier functions (NGWFs) to achieve...
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Numerical Study on Mitigation of Flow Maldistribution in Parallel Microchannel Heat Sink: Channels Variable Width Versus Variable Height Approach
PublikacjaMicrochannel heat sink on one hand enjoys benefits of intensified several folds heat transfer performance but on the other hand has to suffer aggravated form of trifling limitations associated with imperfect hydrodynamics and heat transfer behavior. Flow maldistribution is one of such limitation that exaggerates temperature nonuniformity across parallel microchannels leading to increase in maximum base temperature. Recently, variable...
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Grid Implementation of a Parallel Multiobjective Genetic Algorithm for Optimized Allocation of Chlorination Stations in Drinking Water Distribution Systems: Chojnice Case Study
PublikacjaSolving multiobjective optimization problems requires suitable algorithms to find a satisfactory approximation of a globally optimal Pareto front. Furthermore, it is a computationally demanding task. In this paper, the grid implementation of a distributed multiobjective genetic algorithm is presented. The distributed version of the algorithm is based on the island algorithm with forgetting island elitism used instead of a genetic...
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Investigation of Mechanical and Microstructural Properties of Welded Specimens of AA6061-T6 Alloy with Friction Stir Welding and Parallel Friction Stir Welding Methods
PublikacjaThe present study investigates the effect of two parameters of process type and tool offset on tensile, microhardness, and microstructure properties of AA6061-T6 aluminum alloy joints. Three methods of Friction Stir Welding (FSW), Advancing Parallel-Friction Stir Welding (AP-FSW), and Retreating Parallel-Friction Stir Welding (RP-FSW) were used. In addition, four modes of 0.5, 1, 1.5, and 2 mm of tool offset were used in two welding...
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Neural, Parallel and Scientific Computations
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JOURNAL OF PARALLEL AND DISTRIBUTED COMPUTING
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INTERNATIONAL JOURNAL OF PARALLEL PROGRAMMING
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Multiprocessor Implementation of Parallel Multiobjective Genetic Algorithm for Optimized Allocation of Chlorination Stations in Drinking Water Distribution System a New Water Quality Model Approach
PublikacjaThe Critical Infrastructure Systems (CISs) have received in recent years a considerable attention due to their heavy impact on sustainable development of modern societies. Most CISs may be classied as large scale complex systems of network structure, in uenced by strong interactions form the surrounding environment, internal and external interconnections. The later is a result of inter-CIS dependencies. The control, monitoring...
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Multiprocessor implementation of Parallel Multiobjective Genetic Algorithm for Optimized Allocation of Chlorination Stations in Drinking Water Distribution System - a new water quality model approach
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Repair Augmentation of Unstable, Complete Vertical Meniscal Tears With Bone Marrow Venting Procedure: A Prospective, Randomized, Double-Blind, Parallel-Group, Placebo-Controlled Study
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Recognition of hazardous acoustic events employing parallel processing on a supercomputing cluster . Rozpoznawanie niebezpiecznych zdarzeń dźwiękowych z wykorzystaniem równoległego przetwarzania na klastrze superkomputerowym
PublikacjaA method for automatic recognition of hazardous acoustic events operating on a super computing cluster is introduced. The methods employed for detecting and classifying the acoustic events are outlined. The evaluation of the recognition engine is provided: both on the training set and using real-life signals. The algorithms yield sufficient performance in practical conditions to be employed in security surveillance systems. The...
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A method for determination of fuel oil consumption saving by stepvise differetiating loads on ship diesel engines running in paralel.
Publikacjaprzedstawiono metodykę wyznaczania oszczędniości w zużyciu paliwa dla silników pracujących na wspólną sieć w wyniku różnicowania ich obciążeń oraz stosowania metody krokowych zmian obciążenia. znajomość charakterystyk zużycia paliwa poszczególnych silników oraz histogramu rozkładu obciążeńeksploatacyjnych pozwala po zastosowaniu proponowanej metody na wyznaczanie oszczędności w zuzyciu paliwa.
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International Journal of Distributed and Parallel Systems
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Implementation of Molecular Dynamics and Its Extensions with the Coarse-Grained UNRES Force Field on Massively Parallel Systems: Toward Millisecond-Scale Simulations of Protein Structure, Dynamics, and Thermodynamics
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Multi-source-supplied parallel hybrid propulsion of the inland passenger ship STA.H. Research work on energy efficiency of a hybrid propulsion system operating in the electric motor drive mode
PublikacjaIn the Faculty of Ocean Engineering and Ship Technology, Gdansk University of Technology, design has recently been developed of a small inland ship with hybrid propulsion and supply system. The ship will be propelled by a specially designed so called parallel hybrid propulsion system. The work was aimed at carrying out the energy efficiency analysis of a hybrid propulsion system operating in the electric motor drive mode and at...
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Author Reply to “Regarding ‘Repair Augmentation of Unstable, Complete Vertical Meniscal Tears With Bone Marrow Venting Procedure: A Prospective, Randomized, Double-Blind, Parallel-Group, Placebo-Controlled Study’”
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Short-Term Outcomes of Percutaneous Trephination with a Platelet Rich Plasma Intrameniscal Injection for the Repair of Degenerative Meniscal Lesions. A Prospective, Randomized, Double-Blind, Parallel-Group, Placebo-Controlled Study
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Paweł Rościszewski dr inż.
OsobyPaweł Rościszewski received his PhD in Computer Science at Gdańsk University of Technology in 2018 based on PhD thesis entitled: "Optimization of hybrid parallel application execution in heterogeneous high performance computing systems considering execution time and power consumption". Currently, he is an Assistant Professor at the Faculty of Electronics, Telecommunications and Informatics, Gdańsk University of Technology, Poland....
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Piotr Sypek dr inż.
OsobyPiotr Sypek otrzymał w Politechnice Gdańskiej tytuł magistra inżyniera w 2003 roku oraz stopień doktora nauk technicznych (z wyróżnieniem) w 2012 roku. Obecnie pracuje w Katedrze Inżynierii Mikrofalowej i Antenowej na Wydziale Elektroniki, Telekomunikacji i Informatyki w Politechnice Gdańskiej. Jego działalność badawcza zawiera projektowanie i implementację równoległych algorytmów stosowanych do budowania i wyznaczania rozwiązywania...
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Anterior Cruciate Ligament Reconstruction Using a 4-Strand Semitendinosus Tendon Graft or a Doubled Semitendinosus and Gracilis Tendon Graft: A 4.5-Year Prospective, Randomized, Double-Blind, Parallel-Group Study
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Graphical presentation of the power of energy losses and power developed in the elements hydrostatic drive and control system. Part II. Rotational hydraulic motor speed parallel throtling control and volumetric control systems
PublikacjaPrzedstawiono interpretację graficzną mocy strat energetycznych występujących w elementach układów napędu i sterowania hydrostatycznego, a także mocy rozwijanych przez te elementy. Dokonano analizy układu indywidualnego ze sterowaniem dławieniowym równoległym prędkości silnika hydraulicznego obrotowego, układu indywidualnego ze sterowaniem objętościowym, pompą o zmiennej wydajności, prędkości silnika hydrailicznego obrotowego,...
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Efficacy, pharmacokinetics, and safety of the biosimilar CT-P10 compared with rituximab in patients with previously untreated advanced-stage follicular lymphoma: a randomised, double-blind, parallel-group, non-inferiority phase 3 trial
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On the possible increasing of efficiency of ship power plant with the system combined of marine diesel engine, gas turbine and steam turbine in case of main engine cooperation with the gas turbine fed in parallel and the steam turbine
PublikacjaW pracy przedstawiono koncepcję układu kombinowanego okrętowego dużej mocy złożonego z wiodącego silnika głównego spalinowego silnika tłokowego i skojarzonych z nim turbiny gazowej mocy i układu turbiny parowej, wykorzystujących energię zawartą w spalinach wylotowych głównego silnika spalinowego. Rozpatrzono wariant układu kombinowanego, w którym główny jest silnik tłokowy skojarzony z turbiną gazową mocy i układem turbiny parowej,...
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Modeling SPMD Application Execution Time
PublikacjaParallel applications in a Single Process Multiple Data paradigm assume splitting huge amounts of data to multiple processors working in parallel at small data packets. As the individual data packets are not independent, the processors must interact with each other to exchange results of the calculations with their adjacent partners and take these results into account in their own computations. An example of SPMD is geometric parallelism...
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Jerzy Proficz dr hab. inż.
OsobyJerzy Proficz – dyrektor Centrum Informatycznego Trójmiejskiej Akademickiej Sieci Komputerowej (CI TASK) na Politechnice Gdańskiej. Uzyskał stopień naukowy doktora habilitowanego (2022) w dyscyplinie: Informatyka techniczna i telekomunikacja. Autor i współautor ponad 50 artykułów w czasopismach i na konferencjach naukowych związanych głównie z równoległym przetwarzaniem danych na komputerach dużej mocy (HPC, chmura obliczeniowa). Udział...
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Przetwarzanie rozproszone
Kursy OnlineFoundations and rules of distributed and parallel processing in networked computer systems.
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Machine Learning in Multi-Agent Systems using Associative Arrays
PublikacjaIn this paper, a new machine learning algorithm for multi-agent systems is introduced. The algorithm is based on associative arrays, thus it becomes less complex and more efficient substitute of artificial neural networks and Bayesian networks, which is confirmed by performance measurements. Implementation of machine learning algorithm in multi-agent system for aided design of selected control systems allowed to improve the performance...