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ESCASA : Analytical estimation of atomic coordinates from coarse‐grained geometry for nuclear‐magnetic‐resonance ‐assisted protein structure modeling. I. Backbone and Hβ protons
PublikacjaA method for the estimation of coordinates of atoms in proteins from coarse-grained geometry by simple analytical formulas (ESCASA), for use in nuclear-magnetic-resonance (NMR) data-assisted coarse-grained simulations of proteins is proposed. In this paper, the formulas for the backbone Hα and amide (HN) protons, and the side-chain Hβ protons, given the Cα-trace, have been derived and parameterized, by using the interproton distances...
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Twenty years' (1996-2016) tropospheric parameters for selected EPN stations derived from GPS double-difference processing
Dane BadawczePropagation of global navigation satellite systems (GNSS) signals through the Earth’s atmosphere is affected by its physical properties. Both hydrostatic and wet part of the atmosphere (mostly related with troposphere) causes delays of GNSS signal, which usually are expressed in the zenith direction (zenith hydrostatic delay - ZHD, and zenith wet delay...
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Twenty years' (1996-2016) tropospheric parameters for selected EPN stations derived from GPS precise point positioning
Dane BadawczePropagation of global navigation satellite systems (GNSS) signals through the Earth’s atmosphere is affected by its physical properties. Both hydrostatic and wet part of the atmosphere (mostly related with troposphere) causes delays of GNSS signal, which usually are expressed in the zenith direction (zenith hydrostatic delay - ZHD, and zenith wet delay...
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Tropospheric parameters derived from the selected IGS stations in the global tropics for the years 2001-2018
Dane BadawczeThis dataset contains daily GNSS-derived zenith tropospheric delay (ZTD), a posteriori corrected zenith wet delay (ZWD), and precipitable water vapour (PWV) time series. These troposphere-related data were estimated for the period between January 2001 and December 2018, for the 43 International GNSS Service (IGS) stations, located in the global tropics....
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Data from 76- to 81-GHz mmWave Sensor located at S7 road
Dane BadawczeThe set consists data recorded employing IWR1642 mmWave sensor from Texas Instruments. The purpose of the experiment was to detect vehicles and their speed in real conditions – at S7 road, near Dworek village (54°14'40.0"N 18°59'59.0"E).
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Electronic transition dipole moment functions of the first singlet Delta gerade and first triplet Delta ungerade states of the Lithium dimer
Dane BadawczeElectronic transition dipole moment functions (ETDMF) of the first singlet Delta gerade (1sDg) and first triplet Delta ungerade (1tDu) states have been calculated for the Lithium dimer. ETDMFs are needed in understanding processes like photodissociation, photoassociation, cooling, and trapping of molecules. The results of the four ETDMFs have been obtained...
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Electronic transition dipole moment functions of the second triplet Sigma ungerade plus state of the Lithium dimer
Dane BadawczeElectronic transition dipole moment functions (ETDMF) of the second triplet Sigma ungerade plus (2tSu+) state have been calculated for the Lithium dimer. ETDMFs are needed in understanding processes like photodissociation, photoassociation, cooling, and trapping of molecules. The results of the five ETDMFs have been obtained by the nonrelativistic multireference...
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Electronic transition dipole moment functions of the second singlet Sigma ungerade plus and second triplet Sigma gerade plus states of the Lithium dimer
Dane BadawczeElectronic transition dipole moment functions (ETDMF) of the second singlet Sigma ungerade plus (2sSu+) and second triplet Sigma gerade plus (2tSg+) states have been calculated for the Lithium dimer. ETDMFs are needed in understanding processes like photodissociation, photoassociation, cooling, and trapping of molecules. The results of the four ETDMFs...
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Adiabatic potential energy curves of the KRb molecule
Dane BadawczeAdiabatic potential energy curves (APEC) of the singlet (s) and triplet (t) Sigma+, Sigma-, Pi, and Delta electronic states have been calculated for the KRb molecule. Presented APECs correlate with 11 atomic asymptotes, starting from ground K(4s)+Rb(5s) atomic limit and ending on double-excited K(4p)+Rb(5p) atomic limit. All results of the presented...
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Electronic transition dipole moment functions of the third singlet Sigma gerade plus state of the Lithium dimer
Dane BadawczeElectronic transition dipole moment functions (ETDMF) of the third singlet Sigma gerade plus (3sSg+) state have been calculated for the Lithium dimer. ETDMFs are needed in understanding processes like photodissociation, photoassociation, cooling, and trapping of molecules. The results of the five ETDMFs have been obtained by the nonrelativistic multireference...
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Electronic transition dipole moment functions of the first singlet Sigma ungerade plus and first triplet Sigma gerade plus states of the Lithium dimer
Dane BadawczeElectronic transition dipole moment functions (ETDMF) of the first singlet Sigma ungerade plus (1sSu+) and first triplet Sigma gerade plus (1tSg+) states have been calculated for the Lithium dimer. ETDMFs are needed in understanding processes like photodissociation, photoassociation, cooling, and trapping of molecules. The results of the four ETDMFs...
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Electronic transition dipole moment functions of the third triplet Sigma ungerade plus state of the Lithium dimer
Dane BadawczeElectronic transition dipole moment functions (ETDMF) of the third triplet Sigma ungerade plus (3tSu+) state have been calculated for the Lithium dimer. ETDMFs are needed in understanding processes like photodissociation, photoassociation, cooling, and trapping of molecules. The results of the five ETDMFs have been obtained by the nonrelativistic multireference...
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Electronic transition dipole moment functions of the fourth triplet Sigma ungerade plus state of the Lithium dimer
Dane BadawczeElectronic transition dipole moment functions (ETDMF) of the fourth triplet Sigma ungerade plus (4tSu+) state have been calculated for the Lithium dimer. ETDMFs are needed in understanding processes like photodissociation, photoassociation, cooling, and trapping of molecules. The results of the five ETDMFs have been obtained by the nonrelativistic multireference...
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Electronic transition dipole moment functions of the fourth singlet Sigma gerade plus state of the Lithium dimer
Dane BadawczeElectronic transition dipole moment functions (ETDMF) of the fourth singlet Sigma gerade plus (4sSg+) state have been calculated for the Lithium dimer. ETDMFs are needed in understanding processes like photodissociation, photoassociation, cooling, and trapping of molecules. The results of the five ETDMFs have been obtained by the nonrelativistic multireference...
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Electronic transition dipole moment functions of the first singlet Pi gerade and first triplet Pi gerade states of the Lithium dimer
Dane BadawczeElectronic transition dipole moment functions (ETDMF) of the first singlet Pi gerade (1sPg) and first triplet Pi gerade (1tPg) states have been calculated for the Lithium dimer. ETDMFs are needed in understanding processes like photodissociation, photoassociation, cooling, and trapping of molecules. The results of the four ETDMFs have been obtained...
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Electronic transition dipole moment functions of the second singlet Sigma gerade plus state of the Lithium dimer
Dane BadawczeElectronic transition dipole moment functions (ETDMF) of the second singlet Sigma gerade plus (2sSg+) state have been calculated for the Lithium dimer. ETDMFs are needed in understanding processes like photodissociation, photoassociation, cooling, and trapping of molecules. The results of the five ETDMFs have been obtained by the nonrelativistic multireference...
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Electronic transition dipole moment functions of the fifth singlet Sigma gerade plus state of the Lithium dimer
Dane BadawczeElectronic transition dipole moment functions (ETDMF) of the fifth singlet Sigma gerade plus (5sSg+) state have been calculated for the Lithium dimer. ETDMFs are needed in understanding processes like photodissociation, photoassociation, cooling, and trapping of molecules. The results of the five ETDMFs have been obtained by the nonrelativistic multireference...
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Electronic transition dipole moment functions of the third singlet Sigma ungerade plus and third triplet Sigma gerade plus states of the Lithium dimer
Dane BadawczeElectronic transition dipole moment functions (ETDMF) of the third singlet Sigma ungerade plus (3sSu+) and third triplet Sigma gerade plus (3tSg+) states have been calculated for the Lithium dimer. ETDMFs are needed in understanding processes like photodissociation, photoassociation, cooling, and trapping of molecules. The results of the four ETDMFs...
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Electronic transition dipole moment functions of the second singlet Pi gerade and second triplet Pi gerade states of the Lithium dimer
Dane BadawczeElectronic transition dipole moment functions (ETDMF) of the second singlet Pi gerade (2sPg) and second triplet Pi gerade (2tPg) states have been calculated for the Lithium dimer. ETDMFs are needed in understanding processes like photodissociation, photoassociation, cooling, and trapping of molecules. The results of the four ETDMFs have been obtained...
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Electronic transition dipole moment functions of the fifth triplet Sigma ungerade plus state of the Lithium dimer
Dane BadawczeElectronic transition dipole moment functions (ETDMF) of the fifth triplet Sigma ungerade plus (5tSu+) state have been calculated for the Lithium dimer. ETDMFs are needed in understanding processes like photodissociation, photoassociation, cooling, and trapping of molecules. The results of the five ETDMFs have been obtained by the nonrelativistic multireference...
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Electronic transition dipole moment functions of the first singlet Sigma gerade plus state of the Lithium dimer
Dane BadawczeElectronic transition dipole moment functions (ETDMF) of the first singlet Sigma gerade plus (1sSg+) state have been calculated for the Lithium dimer. ETDMFs are needed in understanding processes like photodissociation, photoassociation, cooling, and trapping of molecules. The results of the five ETDMFs have been obtained by the nonrelativistic multireference...
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Electronic transition dipole moment functions of the first triplet Sigma ungerade plus state of the Lithium dimer
Dane BadawczeElectronic transition dipole moment functions (ETDMF) of the first triplet Sigma ungerade plus (1tSu+) state have been calculated for the Lithium dimer. ETDMFs are needed in understanding processes like photodissociation, photoassociation, cooling, and trapping of molecules. The results of the five ETDMFs have been obtained by the nonrelativistic multireference...
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Experimental Study on Pounding between Structures during Damaging Earthquakes
PublikacjaMutual pounding between structures during earthquakes may cause serious structural damage. The aim of this paper is to show the results of a shaking table experimental study focused on pounding between structures in series under several earthquake excitations. The experiments were performed using three tower models with different configurations and different gap distances between them. In the first stage of the study, one rigid...
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Automatic Clustering of EEG-Based Data Associated with Brain Activity
PublikacjaThe aim of this paper is to present a system for automatic assigning electroencephalographic (EEG) signals to appropriate classes associated with brain activity. The EEG signals are acquired from a headset consisting of 14 electrodes placed on skull. Data gathered are first processed by the Independent Component Analysis algorithm to obtain estimates of signals generated by primary sources reflecting the activity of the brain....
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The Research of the Contamination Levels present in Samples of Precipitation and Surface Waters Collected from the Catchment Area Fuglebekken (Hornsund, Svalbard Archipelago)
PublikacjaPersistent organic pollutants (POPs) are contaminants that may appear in polar regions. In present work surface water was collected from the main stream water in the Fuglebekken basin. The precipitationsamples was collected from the near area by Polish Polar Station in Hornsund. The present investigationreveals the results of the analysis of these samples for their total phenols, formaldehyde, TOC, PAHs and PCBs content. The...
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Modelowanie i symulacja ruchu pojazdu zabytkowego podczas hamowania
PublikacjaOpracowano model samochodu zabytkowego z wykorzystaniem metody masa-sprężyna, służącego do symulacji procesu hamowania pojazdu zabytkowego z możliwością pomiaru drogi hamowania. Konfiguracja sieci połączeń między punktami mas elementów zawieszenia oraz opony okazuje się mieć bardzo duży wpływ na zachowanie symulowanego samochodu podczas hamowania. Poprawność symulacji sprawdzono porównując wyniki uzyskane z symulacji oraz z pomiarów...
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Radioisotope measurement of selected parameters of liquid-gas flow using single detector system
PublikacjaTo determine the parameters of two-phase flows using radioisotopes, usually two detectors are used. Knowing the distance between them, the velocity of the dispersed phase is calculated based on time delay estimation. Such a measurement system requires the use of two gamma-ray sealed sources. But in some situations it is also possible to determine velocity of dispersed phase using only one scintillation probe and one gamma-ray source....
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Square Root Raised Cosine Fractionally Delaying Nyquist Filter - Design and Performance Evaluation
PublikacjaIn this paper we propose a discrete-time FIR (Finite Impulse Response) filter which is applied as a square root Nyquist filter and fractional delay filter simultaneously. The filter enables to substitute for a cascade of square root Nyquist filter and fractional delay filter in one device/algorithm. The aim is to compensate for transmission delay in digital communication system. Performance of the filter as a matched filter is...
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Tropospheric delays derived from GNSS observations during the derecho event in Poland of 11th August 2017
Dane BadawczePropagation of global navigation satellite systems (GNSS) radio signals is disturbed by the current state of the Earth's atmosphere. For this reason, advances processing of GNSS signals can be used for investigation of the atmospheric condition. In case of troposphere, the GNSS signals allow for obtain information of tropospheric delay, which is mainly...
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Non-adiabatic coupling elements between the diatomic silver anion and neutral silver dimer plus continuum electron
Dane BadawczeThe process of a two-channel decay of the diatomic silver anion (Ag2-), namely the spontaneous electron ejection giving Ag2 + e- and the dissociation leading to Ag- + Ag is theoretically studied. The ground state potential energy curves (PECs) of the neutral silver dimer and anionic silver diatomic molecule are calculated using the single reference...
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A correlation between electron-hole pair radii and magnetomodulation of exciplex fluorescence in electron donor-electron acceptor organic systems
PublikacjaElectric field dependencies of electromodulated photoluminescence and magnitudes of the magnetic-field effect on photoluminescence havebeen measured in vacuum-evaporated films of m-MTDATA [4,4',4"-tris(N-(3-methylphenyl)-N-phenylamino)triphenylamine]:bathophe-nanthroline, m-MTDATA:BCP (bathocuproine), as well as 4,4',4"-tris[2-naphthyl(phenyl)amino]triphenylamine:BCP. The Sano-Tachiya-Noolandi-Hong extension of standard Onsager...
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Fast Approximate String Search for Wikification
PublikacjaThe paper presents a novel method for fast approximate string search based on neural distance metrics embeddings. Our research is focused primarily on applying the proposed method for entity retrieval in the Wikification process, which is similar to edit distance-based similarity search on the typical dictionary. The proposed method has been compared with symmetric delete spelling correction algorithm and proven to be more efficient...
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Channel Impulse Response Measurements at mmWave Band in Office and Conference Rooms
PublikacjaIn this paper, the measurements of the channel impulse response at mmWave band in office and conference rooms are described. The central frequency is 27 GHz with a bandwidth of 400 MHz. The description of the used measurement stand and considered environments are presented. The initial analysis of the power delay profile, mean delay, and RMS delay spread allows preliminary conclusions to be drawn that there is a significant impact...
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AMCA to TAMRA long range resonance energy transfer on a flexible peptide
PublikacjaFörster resonance energy transfer between 7-amino-4-methyl-3-coumarinylacetic acid, (AMCA, donor) and 5- carboxytetramethylrhodamine, (TAMRA, acceptor) bound to Lys(AMCA)-Gly-Pro-Arg-Ser-Leu-Ser-Gly-Lys (TAMRA)-NH2 peptide is demonstrated by various spectroscopic techniques in glycerol at room temperature. In particular, nonexponential character of fluorescence intensity decay evidences the distance distribution between the donor...
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Level of public finances decentralization in European Union countries
PublikacjaResearch background: Despite of the universality of the implementation in democratic countries the principle of decentralization resulting from the belief that it is an instrument to improve the efficiency of public funds management, both the scope of public services and the level of decentralization in individual countries are not identical. Purpose of the article: Comparison the scope of fiscal decentralization...
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Recent Advances in Loop Heat Pipes with Flat Evaporator
PublikacjaThe focus of this review is to present the current advances in Loop Heat Pipes (LHP) with flat evaporators, which address the current challenges to the wide implementation of the technology. A recent advance in LHP is the design of flat-shaped evaporators, which is better suited to the geometry of discretely mounted electronics components (microprocessors) and therefore negate the need for an additional transfer surface (saddle)...
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Desiging e-learning courses and distance learning (level 1. certified course)
Kursy Online -
Application of Intelligent Conversational Agents in E-learing Environments
PublikacjaThe paper concerns intelligent tutoring systems and concentrates on apliaction of virtual mentors in distance learning environments. Different educational agent types are described. The prototype of an agent developed at Gdansk University of Technology is also presented, as well as its internal representation and construction. Benefits of virtual mentors applied in distance learning are also pointed out.
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Investigation on Damage-Involved Structural Response of Colliding Steel Structures during Ground Motions
PublikacjaEarthquakes are the most unpredictable damaging loads which can affect civil engineering structures. Due to insufficient separation distance between adjacent structures with different dynamic properties, structural collisions may occur during ground motions. Although the research on structural pounding has recently been much advanced, the studies have mainly been conducted for concrete structures. The aim of this paper is to show...
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3D Vision System for a Robotic Arm Based on Equal Baseline Camera Array
PublikacjaThis paper presents a lightweight 3D vision system called Equal Baseline Camera Array (EBCA). EBCA can work in different light conditions and it can be applied for measuring large range of distances. The system is a useful alternative to other known distance measuring devices such as structured-light 3D scanners, time-of-flight cameras, Light Detection and Ranging (LIDAR) devices and structure from motion techniques. EBCA can be...
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ANALIZA PORÓWNAWCZA DROGI HAMOWANIA MOTOCYKLA Z WŁĄCZONYM I WYŁĄCZONYM UKŁADEM ABS
PublikacjaW artykule przedstawiono wyniki pomiaru drogi hamowania motocykla przy użyciu hamulca koła przedniego, koła tylnego oraz kombinacji obu tych hamulców. Próby intensywnego hamowania motocykla przeprowadzono na suchej nawierzchni asfaltowej z włączonym i wyłączonym układem ABS. Na podstawie zmierzonej drogi hamowania dokonano obliczenia średniego opóźnienia hamowania.
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ANN for human pose estimation in low resolution depth images
PublikacjaThe paper presents an approach to localize human body joints in 3D coordinates based on a single low resolution depth image. First a framework to generate a database of 80k realistic depth images from a 3D body model is described. Then data preprocessing and normalization procedure, and DNN and MLP artificial neural networks architectures and training are presented. The robustness against camera distance and image noise is analysed....
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Examination of the factors influencing binaural rendering on headphones with the use of directivity patterns
PublikacjaThis paper presents a study on the influence of the directional sound sources with the use of the directivity patterns. This contribution also includes a comparison to the work done by Wendt et al., where several directivity pattern designs used to gradually control the auditory source distance in a room were showed. While the tests of Wendt et al. were done by auralizing source and room using a loudspeaker ring in an anechoic...
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Techniques of distant teaching (2019) - materials
Kursy Online -
Nadzeya Sabatini dr
OsobyNadzeya Sabatini is Assistant Professor in Digital Transformation at Gdańsk University of Technology (Gdansk, Poland), its Department of Informatics in Management (Faculty of Management and Economics). Nadzeya is lecturer at USI – Università della Svizzera italiana (Lugano, Switzerland), a research fellow at the Institute of Digital Technologies for Communication of the same university, and coordinator of MSc in Digital Fashion...
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Hopf bifurcation in time‐delayed gene expression model with dimers
PublikacjaWe study a mathematical model of gene transcription and protein synthesis with negative feedback. We consider a system of equations taking into account the formation of dimers (i.e., complex formed by two protein monomers), the way in which dimers bind to DNA and time delay in translation process. For the model consisting of three ordinary differential equations with time delay, we derive conditions for stability of the positive...
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Cooperative Data Transmission in Wireless Vehicular Networks
PublikacjaThe paper presents issues related to the cooperative transmission in wireless vehicular networks. Cooperative transmission involves the use of mobile terminals as relay stations to improve the transmission quality, improve network performance and reduce energy consumption. The paper presents the methods used to implement cooperative transmission and the types of cooperative networks.
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Towards increasing F-measure of approximate string matching in O(1) complexity
PublikacjaThe paper analyzes existing approaches for approximate string matching based on linear search with Levenshtein distance, AllScan and CPMerge algorithms using cosine, Jaccard and Dice distance measures. The methods are presented and compared to our approach that improves indexing time using Locally Sensitive Hashing. Advantages and drawbacks of the methods are identified based on theoretical considerations as well as empirical evaluations...
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Synthesis and characterization of ruthenium and rhenium dyes with phosphonate anchoring groups
PublikacjaRe(L1)–Re(L3), a series of rhenium(I) tricarbonyl chloride complexes with bpy-R2 derivatives L1–L3 (bpy = 2,2′-bipyridine, R represents the substitution at the 4- and 4′-positions), and their corresponding trishomoleptic Ru(L1)3–Ru(L3)3 as well as heteroleptic ruthenium(II) complexes Ru(tbbpy)2(L1) and Ru(tbbpy)2(L2) have been synthesized and characterized. Their applicability as immobilizable metal–organic chromophores in solar...
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Analysis of Accuracy of Modified Gradient Method in Indoor Radiolocalisation System
PublikacjaIn this paper a new method, called modified gradient method, has been proposed for position calculation on the basis of distance measurement in indoor environment. It is shown that well known method of position calculation such as Foy is inefficient in indoor environment. In this article is also described the indoor radiolocalisation system which was used for collecting distance measurements which were employed for further comparative...