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Search results for: BUILDING%20PHYSICS
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Identification and characterization of single-stranded DNA-binding protein from the facultative psychrophilic bacteria Pseudoalteromonas haloplanktis
PublicationSingle-stranded DNA-binding protein (SSB) plays an important role in DNA metabolism such as DNAreplication, repair, and recombination, and is essential for cell survival. This study reports on the ssb-likegene cloning, gene expression and characterization of a single-stranded DNA-binding protein of Pseudoal-teromonas haloplanktis (PhaSSB) and is the first report of such a protein from psychrophilic microorganism.PhaSSB possesses...
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Heat transfer during pool boiling of water, methanol and R141b on porous coated horizontal tube bundles
PublicationPrzedstawiono wyniki badań eksperymentalnych wrzenia wody, metanolu i R141b na poziomym pęczku rur pokrytych metaliczna powłoką porowatą. Badania przeprowadzono dla podziałek rur 1.7d oaz 2d, przy ciśnieniu atmosferycznym i podciśnieniu.
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The thermostability, bioactive compounds and antioxidant activity of some vegetables subjected to different durations of boiling: investigation in vitro
PublicationThis research was performed in order to compare the water and acetone extracts of raw and boiled for 10, 20, 40 and 60 min Korean lotus roots (KLR) and Polish white onion (PWO) in the contents of theirbioactive compounds, antioxidant activity and thermostability.It was found that polyphenols (mg GAE/g), flavanols (mg GAE/g), flavonoids (mg CE/g), anthocyanins (mg CGE/kg) and tannins (mg CE/g) in water extract of raw lotus roots...
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Taq DNA polymerase fused with DNA binding protein with increased resistance to inhibitors from clinical samples
PublicationNowadays PCR method is commonly used in molecular diagnostic. However, in many cases PCR is limited, by the presence of inhibitory substances in biological, soil or food samples Efficiency and fidelity of amplification is strongly connected with DNA polymerase and reaction conditions. To meet the requirements of modern diagnostic methods it is essential to seeking for new DNA polymerases with better properties useful in these field....
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Modelling of saturated, subcooled and post-dryout flow boiling with the energy dissipation based semi-empirical model
PublicationA comprehensive semi-empirical model for saturated, subcooled and post dryout heat transfer is presented based on considerations of energy dissipation in the flow. The fundamental hypothesis in the model is the fact that heat transfer during flow boiling can be treated as a sum of two contributions constituting the total energy dissipation in the flow, namely the energy dissipation due to the shearing flow without the bubbles and...
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COMPARISON OF PREDICTIVE METHODS FOR FLOW BOILING HEAT TRANSFER IN CONVENTIONAL CHANNELS AND MINICHANNELS – THE EFFECT OF REDUCED PRESSURE
PublicationIn the paper are presented the results of follow on studies from [1]–[3] using authors own model to predict heat transfer coefficient during flow boiling. The model has been tested against a large selection of experimental data collected from various researchers to investigate the sensitivity of the in-house developed model. The collected experimental data came from various studies from literature and were conducted for the full...
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Heat Transfer During Pool Boiling of Water, Methanol and R141b on Porous Coated Horizontal Tube Bundles
PublicationThis paper presents the results of experimental investigation of water, methanol and R141b refrigerant boiling on horizontal porous coated tube bundles supposed to represent a flooded-type evaporator. Experiments were carried out for a bundle of 19 tubes in triangular layout for two pitch-to-diameter ratio values – 1.7 and 2.0 – in atmospheric and sub-atmospheric pressure conditions. Average heat transfer coefficients – both local,...
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Highly Conserved Homotrimer Cavity Formed by the SARS-CoV-2 Spike Glycoprotein: A Novel Binding Site
PublicationAn important stage in severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) life cycle is the binding of the spike (S) protein to the angiotensin converting enzyme-2 (ACE2) host cell receptor. Therefore, to explore conserved features in spike protein dynamics and to identify potentially novel regions for drugging, we measured spike protein variability derived from 791 viral genomes and studied its properties by molecular...
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Mapping the Structural and Dynamic Determinants of pH-Sensitive Heparin Binding to Granulocyte Macrophage Colony Stimulating Factor
PublicationGranulocyte macrophage colony stimulating factor (GMCSF) is an immunomodulatory cytokine that is harnessed as a therapeutic. GMCSF is known to interact with other clinically important molecules, such as heparin, suggesting that endogenous and administered GMCSF has the potential to modulate orthogonal treatment outcomes. Thus, molecular level characterization of GMCSF and its interactions with biologically active compounds is critical...
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Comparison of predictive methods for flow boiling heat transfer in conventional channels and minichannels - the effect of reduced pressure
PublicationIn the paper are presented the results of follow on studies from [1]–[3] using authors own model to predict heat transfer coefficient during flow boiling. The model has been tested against a large selection of experimental data collected from various researchers to investigate the sensitivity of the in-house developed model. The collected experimental data came from various studies from literature and were conducted for the full...
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Experimental validation of pressure drop models during flow boiling of R134a – effect of flow acceleration and entrainment
PublicationA crucial step to assure proficient work of power and process apparatus is their proper design. A wide array of those devices operates within boiling or condensation of the working fluid to benefit from high heat transfer rates. Two-phase flows are associated with high heat transfer coefficients because of the latent heat of evaporation and high turbulence level between the liquid and the solid surface. Predicting heat transfer...
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Simple Physics-Based Analytical Formulas for the Potentials of Mean Force for the Interaction of Amino Acid Side Chains in Water. IV. Pairs of Different Hydrophobic Side Chains
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Study on Methods to Control Interstory Deflections
PublicationOne of the possibilities to prevent building pounding between two adjacent structures is to consider appropriate in-between separation distance. Another approach might be focused on controlling the relative displacements during seismic excitations. Although the majority of building codes around the world recommend the use of some equations of various distances between structures to avoid pounding; a lot of reports after earthquakes...
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The Ellenbogen's "Matter as Software" Concept for Quantum Computer Implementation: III. Selection of X@C60 Molecular Building Blocks (MBBs) for Tip-Based Nanofabrication (TBN) of Trapped Neutral Atom Quantum Computing Devices
PublicationThe selection of guest atoms X of X@C60 MBBs for TBN of trapped neutral atom quantum computing devices is reported. Assuming the all-optical quantum computing as a final target stage, the two criteria are most important: the charge q accumulated on the C60 host must be as low as possible, and the atom X must have one or more available excited states within the band falling into the low energy window of neutral C60 molecule electronic...
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Predicting Value of Binding Constants of Organic Ligands to Beta-Cyclodextrin: Application of MARSplines and Descriptors Encoded in SMILES String
PublicationThe quantitative structure–activity relationship (QSPR) model was formulated to quantify values of the binding constant (lnK) of a series of ligands to beta–cyclodextrin (β-CD). For this purpose, the multivariate adaptive regression splines (MARSplines) methodology was adopted with molecular descriptors derived from the simplified molecular input line entry specification (SMILES) strings. This approach allows discovery of regression...
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Application of reversed-phase thin layer chromatography and QSRR modelling for prediction of protein binding of selected β-blockers
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A common method for calculation of flow boiling and flow condensation heat transfer coefficients in minichannels with account of nonadiabatic effects
PublicationW pracy przedstawiono metodę ogólną wyznaczania współczynników przejmowania ciepła podczas wrzenia w przepływie i kondensacji w przepływie w minikanałach z uwzględnieniem efektu nieadiabatycznego. Uwzględnia ona wpływ modyfikacji naprężeń stycznych na granicy ciecz-para na wymianę ciepła.
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Novel DNA-binding protein from Nanoarchaeum equitans Kin4-M binds all kinds of nucleic acids
PublicationNanoarchaeum equitans is the only known representative of Archaea phylum Nanoarchaeota and stands out as one of the tiniest known living organism. What is more it has smallest genome, which is only 490.885 base pairs long. It is also one of the most compact genomes. According to predictions about 95% of the DNA encodes proteins or stable RNA. Nanoarchaeum equitans lacks genes for most vital metabolic pathways including lipid, cofactor,...
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A semi-empirical method for calculation of flow boiling heat transfer coefficients for conventional channels and small diameter tubes
PublicationW pracy przedstawiono rozważania na temat modelowania dwufazowego przepływu wrzącego w kanałach konwencjonalnych i w kanałach o małej średnicy. Przedstawiono modyfikację korelacji zaproponowanej wcześniej przez J. Mikielewicza na podstawie nowych danych eksperymentalnych, uzyskanych dla kanałów o małej średnicy. Bank danych obejmował ponad 460 punktów pomiarowych dla czynników R141b, R134a, R113, R123, R12, R11 i wody. Uzyskano...
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Improved semi-empirical method for determination of heat transfer coefficient in flow boiling in conventional and small diameter tubes
PublicationPraca dotyczy przedstawienia poprawionego modelu umożliwiającego wyznaczanie współczynnika przejmowania ciepła w kanałach o małych średnicach jaj i tych tradycyjnych. Model zweryfikowano na 6 czynnikach chłodnuiczych uzyskując bardzo zadowalającą zgodność.
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Measuring moisture damage of asphalt mixtures: The development of a new modified boiling test based on color image processing
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Badania wrzenia R22 w rurkach z powłoką porowatą. Investigation of R22 flow boiling in porous tubes.
PublicationW pracy przedstawiono wyniki pomiarów współczynnika przejmowania ciepła przy wrzeniu w przepływie R22 w poziomej rurce z aluminiową powłoką porowatą. Otrzymane dane odniesiono do wyników uzyskanych dla gładkiej stalowej rurki oraz rurki typu microfin. Rurka gładka i z powłoką porowatą była wykonana ze stali nierdzewnej o grubości ścianki 0.6 mm. Grubość powłoki porowatej wynosiła 0,2 mm. Eksperymenty prowadzono przy stopniu suchości...
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Non-isothermal effects in a common method for calculation of heat transfer coefficient in flow boiling and flow condensation in minichannels
PublicationW pracy przestawiono efekty nieizotermiczne w metodzie wyznaczania współczynnika przejmowania ciepła podczas wrzenia w przepływie oraz kondensacji w przepływie w minikanałach. Wyniki obliczeń porównano z badaniami eksperymentalnymi z literatury, uzyskując dobrą zgodność.
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Soft Sensor Application in Identification of the Activated Sludge Bulking Considering the Technological and Economical Aspects of Smart Systems Functioning
PublicationThe paper presented the methodology for the construction of a soft sensor used for activated sludge bulking identification. Devising such solutions fits within the current trends and development of a smart system and infrastructure within smart cities. In order to optimize the selection of the data-mining method depending on the data collected within a wastewater treatment plant (WWTP), a number of methods were considered, including:...
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Fusion of Taq DNA polymerase with single-stranded DNA binding-like protein of Nanoarchaeum equitans—Expression and characterization
PublicationDNA polymerases are present in all organisms and are important enzymes that synthesise DNA molecules. They are used in various fields of science, predominantly as essential components for in vitro DNA syntheses, known as PCR. Modern diagnostics, molecular biology and genetic engineering need DNA polymerases which demonstrate improved performance. This study was aimed at obtaining a new NeqSSB-TaqS fusion DNA polymerase from the...
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Influence of temperature and interactions with ligands on dissociation of dsDNA and ligand-dsDNA complexes of various types of binding : an electrochemical study.
PublicationSeveral medicinally important compounds that bind to dsDNA strands via intercalation (C-1311, C-1305, EtBr), major groove binding (Hoechst 33258) and covalent binding (cis-Pt) were examined. The obtained results suggest that both the transfer of conformation B to C and the denaturation process, for the ligand-dsDNA complexes, except for covalently bound cis-Pt, took place at higher temperatures compared to the unbound helix. Furthermore,...
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Experimental investigation of M-shape heat transfer coefficient distribution of R123 flow boiling in small-diameter tubes
PublicationW publikacji przedstawiono wyniki badań wrzenia czynnika R123 w srebrnych rurkach o małych średnicach (średnice wewnętrzne wynosiły odpowiednio 1.15 mm i 2.3 mm). Badania przeprowadzono w szerokim zakresie stopnia suchości pary (0.01-0.9), gęstości strumienia masy (650-3000 kg/(m2s)) oraz gęstości strumienia ciepła (40-80 kW/m2). W badaniach wykazano, że istnieją dwa lokalne maksima współczynnika przejmowania ciepła w jego profilu...
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Experimental study of flow boiling pressure drop and heat transfer of R1233zd(E) at moderate and high saturation temperatures
PublicationThe paper presents the results of experimental study of flow boiling of R1233zd(E) in minichannel at moderate and high saturation temperatures. The heat transfer coefficient and pressure drop were measured for flow boiling in a stainless steel tube with 2 mm inside diameter and a length of 300 mm. Experiment has been conducted for saturation temperatures ranging from 83 to 145 °C which corresponds to values of reduced pressures...
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Molecular mechanism and energetics of coupling between substrate binding and product release in the F 1 -ATPase catalytic cycle
PublicationF1-ATPase is a motor protein that couples the rotation of its rotary γ subunit with ATP synthesis or hydrolysis. Single-molecule experiments indicate that nucleotide binding and release events occur almost simultaneously during the synthesis cycle, allowing the energy gain due to spontaneous binding of ADP to one catalytic β subunit to be directly harnessed for driving the release of ATP from another rather than being dissipated...
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Museum Institutions in Monuments - Positive and Negative Aspects of Adaptation: The New Amber Museum and Museum of Science in Gdansk, Poland
PublicationThe issue of the creation and location of new museums is a current topic. The decision of where and how to create new museum facilities will impact successful function in the future. Museums are either located in newly designed buildings or in existing buildings. In general, existing buildings adapted for museum use are either formally under conservational protection or not. With regard to museum location in preserved monuments,...
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Museums of Gdansk - Tourism Products or Signs of Remembrance?
PublicationMuseum buildings constitute a significant element in the composition and functionality of contemporary cities. They are both their attractions and landmarks. The article presents a case study illustrating the relation between museum buildings and their location, as well as the showcased exhibition. The article aims at demonstrating the way in which those elements form a harmonious whole - a cultural tourism product affecting the...
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Optimum shapes and dimensions of rubber bumpers in order to reduce structural pounding during seismic excitations
PublicationLarge displacement of structures observed during seismic excitations may lead to collisions between two adjacent, insufficiently-separated buildings and may result in major damages of both of them. In many building codes, appropriate equations or approximately recommended distances between structures in order to avoid pounding hazard have been introduced. Unfortunately, further, more detailed considerations show that safety situation...
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The Ellenbogen's "Matter as Software" Concept for Quantum Computer Implementation: II Bonding Between the C60 and X@C60 Molecules as Available Molecular Building Blocks (MBBs) for Tip-Based Nanofabrication (TBN) of Quantum Computing Devices
PublicationThe binding energy, BE of the X@C60-X@C60 homodimer and the X@C60-Y@C60 heterodimer resulting from the bond formation between the occupied X@C60 MBB and the C60 molecule was studied by means of semiempirical PM7 calculations, where X and Y denote atoms from H to Bi, excluding Tc and lanthanides. All possible combinations of N = 68 guest atoms were considered, which resulted in K = 2346 of different calculated dimers of (X@C60-Y@C60)...
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Sacrum - Profanum, Profanum-Sacrum, Przemiany funkcji budowli sakralnych w XX wieku = Sacrum-Profanum, Profanum-Sacrum, Transformations of function of sacral buildings in 20th century
PublicationPublikacja dotyczy aktualnych problemów zwiazanych z procesami desakralizacji i resakralizacji obiektów. złozony problem dotyczy krajów zarówno Europy wschodniej i zachodniej. Ulegają mu obiekty różnych obrządków i wyznań. Problem dotyczy zarówno samej architektury jak i przemian społecznych.
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The role of isolated farmsteads in the open landscape protection on the example of Kashubia
PublicationAs a result of the social and economic transformation of rural areas, open landscapes are disappearing. Former farmsteads are being devastated or beginning to lose their landscape context due to the spread of residential building development. At the same time, in many places, the farmstead form is clearly legible and remains an element with which the view is structured and enriched. The article was aimed at drawing attention to...
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Aerodynamics in the education of prospective architects
PublicationThe inclusion of issues of aerodynamics in the education of architecture students is discussed in this article. The field of aerodynamics knowledg of the nature of wind phenomena around building developments. It is especially important to know how to influence the occurrence of such phenomena by means of shaping buildings through architectural and urban design. The method applied for working with Master’s degree students in...
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The role and scope of architectural and conservation research procedures in the process of restoring the splendour of an architectural monument created after 1945 on the example of the Suburban Railway Station in Gdynia
PublicationModern Movement buildings, despite their relatively recent construction, are sometimes affected by radical transformations of layout and form. The railway stations being one of the most important public buildings in the city are a special group of them. Due to long-term and intensive use they may bear the signs of exploitation of parts of its substance and have secondary transformations disharmony with the building. The subject...
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Physicochemical profile of Os (III) complexes with pyrazine derivatives: From solution behavior to DNA binding studies and biological assay
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Structure and function of the Ts2631 endolysin of Thermus scotoductus phage vB_Tsc2631 with unique N-terminal extension used for peptidoglycan binding
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Binding modes of a new epoxysuccinyl–peptide inhibitor of cysteine proteases. Where and how do cysteine proteases express their selectivity?
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Heat transfer and pressure drop during flow boiling of pure efrigerants and refrigerant/oil mixtures in tube with porous coating
PublicationW pracy przedstawiono wpływ powłoki porowatej na średni współczynnik przejmowania ciepła oraz opory przepływu podczas wrzenia wybranych czynników chłodniczych wewnątrz poziomych rurek. Badania przeprowadzono dla techniczne czystych czynników chłodniczychR22, R134a i R407C oraz ich mieszanin z olejem poliestrowym 1% i 5% wrzących w rurkach wykonanych ze stali nierdzewnej, o wewnętrznej powierzchni gładkiej oraz z metaliczną powłoką...
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Pool boiling heat transfer of water-Al2O3 and water-Cu nanofluids on horizontal stainless steel smooth and rough tubes
PublicationPrzedstawiono wyniki badań eksperymentalnych przejmowania ciepła przy wrzeniu nanocieczy woda-Al2O3 i woda-Cu na poziomych rurkach ze stali nierdzewnej. Ustalono, że niezależnie od badanej koncentracji nanocząstek (0.01%, 0.1% oraz 1%) współczynnik przejmowania ciepła dla nanocieczy był wyższy niż dla wody i rósł ze wzrostem koncentracji. Ponadto współczynnik przejmowania ciepła dla nanocieczy wzrastał ze wzrostem ciśnienia.
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Identification, cloning, expression, and characterizationof a highly thermostable single-stranded-DNA-binding protein (SSB) from Deinococcus murrayi
PublicationZidentyfikowano i scharakteryzowano białko SSB-podobne, pochodzące z Deinococcus murrayi (DmuSSB). Otrzymany w reakcji PCR fragment zawierający kompletny gen ssb sklonowano w systemie ekspresyjnym Escherichia coli. Gen składa się z 826 nt, kodujących 276 reszt aminokwasowych z wyliczoną teoretycznie masą cząsteczkową monomeru równą 30,14 kDa. DmuSSB zawiera dwie domeny wiążące jednoniciowe DNA OBna monomer I funkcjonuje jako homodimer....
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Evaluating Asphalt Mix Ingredients by Moisture Susceptibility: The Development of a New Modified Boiling Test Procedure Based on Digital Imaging
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Prenatal stress leads to changes in IGF-1 binding proteins network in the hippocampus and frontal cortex of adult male rat
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A Cu/Zn heterometallic complex with solvent-binding cavity, catalytic activity for the oxidation of 1-phenylethanol and unusual magnetic properties
PublicationMononuclear and polymeric complexes of zinc(II) and copper(II) have been synthesized using two isomers of the hemi-salen ligand with a different mutual orientation of donor atoms. The heterometallic Cu/Zn metallocycle features a catalytic niche filled with the molecule of water and molecules of methanol. This unusual compound exhibits both pronounced catalytic activity in the reaction of oxidation of a secondary alcohol to ketone...
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Fusion of DNA-binding domain of Pyrococcus furiosus ligase with TaqStoffel DNA polymerase as a useful tool in PCR with difficult targets
PublicationThe DNA coding sequence of TaqStoffel polymer- ase was fused with the DNA-binding domain of Pyrococcus furiosus ligase. The resulting novel recombinant gene was cloned and expressed in E. coli. The recombinant enzyme was purified and its enzymatic features were studied. The fusion protein (PfuDBDlig-TaqS) was found to have enhanced processivity as a result of the conversion of the Taq DNA polymerase from a relatively low processive...
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Drewno w adoptowanym zabytku - studium przypadku. Budynek nr 2 w dawnych koszarach garnizonu we Wrzeszczu
PublicationThe current structure along with adapted listed buildings and surroundings will create "Garrison of Culture".This part of Gdańsk and Wrzeszcz has been reconnected after eight decades of isolation from the city by joining the square area formed by Grunwaldzka, Słowackiego, Chrzanowskiego, Szymanowskiego streets and the city center. It is a project whitch fits into an aspect of revitalisation related to the socio-economic and environmental...
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Ocena wpływu drgań przekazywanych na budynek przez agregat prądotwórczy
PublicationW artykule opisano zakres badań polowych niezbędnych do określenia poziomu drgań w budynku biurowo-usługowym podczas pracy agregatu prądotwórczego zlokalizowanego na dachu tego budynku. Dokonano oceny szkodliwości pomierzonych drgań na budynek i ludzi, którzy się w nim znajdują. Przedstawiono także krótki przegląd literatury dotyczącej oceny szkodliwości oddziaływań dynamicznych na budynki lub ludzi.
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Corrigendum to “Binding energies of Eu2+ and Eu3+ ions in β-Ca2SiO4 doped with europium” [Opt. Mater. 35 (2013) 2107–2114]
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