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Positron collisions with molecular hydrogen: cross sections and annihilation parameters calculated using theR-matrix with pseudo-states method
PublicationThe molecular R-matrix with pseudo-states (MRMPS) method is employed to study positron collisions with H2. The calculations employ pseudo-continuum orbital sets containing up to h (l = 5) functions. Use of these high l functions is found to give converged eigenphase sums. Below the positronium formation threshold, the calculated cross sections agree with other high-accuracy theories and generally with the measurements. Calculation...
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Novel thermostable ssDNA-binding proteins from Thermus thermophilus and T. aquaticus-expression and purification
PublicationSklonowano w system ekspresyjny pET-30LIC Escherichia coli gen kodujący białka SSB-podobne Thermus thermophilus i T. aquaticus. Oczyszczono do homogenności białka SSB-podobne, a uzyskane preparaty umożliwiają wykonanie badań strukturalnych w/w białek.
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Novel thermostable ssDNA-binding proteins from Thermus thermophilus and T. aquaticus - expression and purification
PublicationBiałka SSB są niezbędne do życia każdemu organizmowi. W tej pracy prezentujemy wyniki otrzymania i oczyszczania białek SSB Thermus thermophilus i T. aquaticus. Dotąd były znane białka SSB jedynie o budowie homotetrameru lub heterotrimeru. Białka SSB Thermus thermophilus i T. aquaticus stanowią nową klasę białek SSB - białek homodimerycznych. Ponadto dowiedziono, iż białka te są użyteczne w reakcji PCR.
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Novel primosomal protein B from thermophilic bacterium Thermoanerobacter tengcongensis
PublicationWe report the identification and characterization of theprimosomal protein B (PriB) from thermophilic bacteriumThermoanerobacter tengcongensis (TtePriB). It is the largestknown bacterial PriB protein consisting 216 amino acidresidues with a calculated molecular mass of 25 kDa. Surprisingly,it is functional as monomer containing two single-stranded DNA binding domain (OB-fold) and it is thecompletely new kind structure of SSB protein....
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Discovery and characterization of RecA protein of thermophilic bacterium Thermus thermophilus MAT72 phage Tt72 that increases specificity of a PCR-based DNA amplification
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Ifluence of geometrical and thermophysical parameters on two-phase thermosiphon performance
PublicationW pracy przedstawiono wyniki badań eksperymentalnych dotyczących wpływu geometrii pęku rur, rodzaju powierzni przejmowania ciepła parownika oraz płynu pośredniego na całkowitą wydajność dwufazowego termosyfonowego wymiennika ciepła (DTWC).
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Construction and purification of his6-Thermus thermophilus MutS protein
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Construction and purification of his6-Thermus thermophilus MutS protein.
PublicationGen mutS z termofilnej bakterii Thermus thermophilus zamplifikowano przy użyciu PCR, sklonowano i przeprowadzono jego ekspresję w E. coli. Rekombinantowe białko MutS zawierające oligohistydynową domenę na N-końcu oczyszczono w jednoetapowej procedurze przy wykorzystaniu chromatografii powinowactwaNi(2+). Zdolność do rozpoznania niekomplementarności białka his(6)-MutS potwierdzono w eksperymentach ochrony DNA przed trawieniem...
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Morphology and the physical and thermal properties of thermoplastic polyurethane reinforced with thermally reduced graphene oxide
PublicationIn this study, thermally reduced graphene oxide (TRG)-containing polyurethane nanocomposites were obtained by the extrusion method. The content of TRG incorporated into polyurethane elastomer systems equaled 0.5, 1.0, 2.0 and 3.0 wt%. The morphology, static and dynamic mechanical properties, and thermal stability of the modified materials were investigated. The application of TRG resulted in a visible increase in material stiffness...
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AmiP from hyperthermophilic Thermus parvatiensis prophage is a thermoactive and ultrathermostable peptidoglycan lytic amidase
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Thermal and Mechanical Behavior of Elastomers Incorporated with Thermoregulating Microcapsules
PublicationPolyurethane (PU) is one of the principal polymers in the global plastic market thanks to its versatility and continuous improvement. In this work, PU elastomeric materials having thermoregulating properties through the incorporation of microcapsules (mSD-(LDPE·EVA-RT27)) from low-density polyethylene and vinyl acetate containing paraffin®RT27 as PCM were produced. Elastomers were synthesized while varying the molar ratio [NCO]/[OH]...
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Two highly thermostable paralogous single-stranded DNA-binding proteins from Thermoanaerobacter tengcongensis
PublicationThe thermophilic bacterium Thermoanaerobacter tengcongensis has two single-stranded DNA-binding (SSB) proteins, designated TteSSB2 and TteSSB3. In a SSB complementation assay in Escherichia coli, only TteSSB3 took over the in vivo function of EcoSSB. We have cloned the ssb genes obtained by PCR and have developed E. coli overexpression systems. The TteSSB2 and TteSSB3 consist of 153 and 150 amino acids with a calculated molecular...
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Bakteria Thermus thermophilus jako źródło enzymów użytecznych w przetwórswie sacharydów
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CDK9: Therapeutic Perspective in HCC Therapy
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Identification and characterization of single-stranded-DNA-binding proteins from Thermus thermophilus and Thermus aquaticus - new arrangement of binding domains
PublicationOkreślono molekularne właściwości białek SSB-podobnych z Thermus thermophi-lus i T. aquaticus. Zbadano aktywność białek oraz termostabilność. Ponadto, dowiedziono homodimeryczność obu białek i ustalono minimalną sekwencję wiążącą ssDNA.
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Dendrimer based theranostic nanostructures for combined chemo- and photothermal therapy of liver cancer cells in vitro
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Production of trehalose by intramolecular transglucosylation of maltose catalysed by a new enzyme from Thermus thermophilus hb-8
PublicationThermus thermophilus HB-8 jest źródłem syntazy trehalozy katalizującej konwersję maltozy. Aktywność specyficzna wytwarzania trehalozy w reakcji katalizowanej ekstraktem białek komórkowych wymienionej bakterii wynosi 0,1 U/mg białka i frakcjonowanie białek przez wysalanie siarczanem amonu powoduje około 3,5-krotne zwiększenie aktywności specyficznej. Optymalna temperatura konwersji maltozy wynosi 65 st.C i w 85 st.C zostaje zachowane...
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Selected thermal and flow issues in a reversed thermosiphon with a steam liquid lifter
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Skin cancer, including related pathways and therapy and the role of luteolin derivatives as potential therapeutics
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Fourier based stabilization of thermal images in dynamic thermography
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Biochemical Characterization and Validation of a Catalytic Site of a Highly Thermostable Ts2631 Endolysin from the Thermus scotoductus Phage vB_Tsc2631
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Thermodynamics of the thermal decomposition of calcium oxalate monohydrate examined theoretically
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In vitro affinity of Deinococcus radiodurans MutS towards mismatched DNA exceeds that of its orthologues from Escherichia coli and Thermus thermophilus
PublicationThe mismatch binding protein MutS is responsible for the recognition of mispaired and unpaired bases, which is the initial step in DNA repair. Among the MutS proteins most extensively studied in vitro are those derived from Thermus thermophilus, Thermus aquaticus and Escherichia coli. Here, we present the first report on the in vitro examination of DNA mismatch binding activity of MutS protein from Deinococcus radiodurans and confront...
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Inverse determination of sliding surface temperature based on measurements by thermocouples with account of their thermal inertia
PublicationThis study developed an inverse heat conduction algorithm to determine temperature at a sliding surface taking account of thermocouple thermal inertia. The direct heat conduction problem was solved analytically based on the Laplace integral transform approach. The inverse algorithm was applied to the problem of friction of a brake material against a steel. The experiments were conducted on a pin-on-disc tribometer for three short-time...
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TspGWI, a thermophilic class-IIS restriction endonuclease from Thermus sp.,recognizes novel asymmetric sequence 5´-ACGGA(N11/9)-3
PublicationA novel prototype class-IIS restriction endonuclease, TspGWI, was isolated from the thermophilic bacterium Thermus sp. GW. The recognition sequence and cleavage positions have been established: TspGWI recognizes the non-palindromic 5-bp sequence 5′-ACGGA-3′ and cleaves the DNA 11 and 9 nt downstream in the top and bottom strand, respectively. In addition, an accompanying endonuclease, TspGWII, an isoschizomer of Pst I, was found...
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Thermohydraulic maldistribution reduction in mini heat exchangers
PublicationA detailed numerical investigation has been carried out to analyze the flow maldistribution in 50 parallel 1 mm × 1 mm rectangular minichannels and 1 mm depth minigap section with rectangular, trapezoidal, triangular or concave manifolds in Z-type flow configuration. The working medium was ethanol and the mass flow rate was 5 × 10−4 kg/s. Both sections were heated from the bottom side. Heat flux of 10 000 W/m2 and 5000 W/m2 was...
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Nonlinear resultant theory of shells accounting for thermodiffusion
PublicationThe complete nonlinear resultant 2D model of shell thermodiffusion is developed. All 2D balance laws and the entropy imbalance are formulated by direct through-the-thickness integration of respective 3D laws of continuum thermodiffusion. This leads to a more rich thermodynamic structure of our 2D model with several additional 2D fields not present in the 3D parent model. Constitutive equations of elastic thermodiffusive shells...
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Some applications of thermophiles and their enzymes for protein processing
PublicationPrzedstawiono charakterystykę, właściwości oraz możliwości zastosowań enzymów proteolitycznych wytwarzanych przez termofile. Zaletą tych biokatalizatorów jest między innymi duża odporność na działanie rozpuszczalników organicznych, detergentów i innych czynników denaturujących białka oraz mała wrażliwość na zmiany pH. Dokonano też przeglądu czynników powodujących dużą stabilność proteaz z termofili.
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Swelling effects in cross-linked polymers by thermogravimetry
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Crystal structure and initial characterization of a novel archaeal-like Holliday junction-resolving enzyme from Thermus thermophilus phage Tth15-6
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Molecular Characterization of a DNA Polymerase from Thermus thermophilus MAT72 Phage vB_Tt72: A Novel Type-A Family Enzyme with Strong Proofreading Activity
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The effect of lithium fluoride on the thermal stability and thermoluminescence properties of borosilicate glass and glass-ceramics
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Dynamic mechanical thermal analysis of polyamide 6/thermoplastic polyurethane blends
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White light thermoplasmonic activated gold nanorod arrays enable the photo-thermal disinfection of medical tools from bacterial contamination
PublicationThe outspread of bacterial pathogens causing severe infections and spreading rapidly, especially among hospitalized patients, is worrying and represents a global public health issue. Current disinfection techniques are becoming insufficient to counteract the spread of these pathogens because they carry multiple antibiotic-resistance genes. For this reason, a constant need exists for new technological solutions that rely on physical...
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Thermodynamical approach to quantifying quantum correlations
PublicationWe consider the amount of work which can be extracted from a heat bath using a bipartite state ρ shared by two parties. In general it is less then the amount of work extractable when one party is in possession of the entire state. We derive bounds for this “work deficit” and calculate it explicitly for a number of different cases. In particuar, for pure states the work deficit is exactly equal to the distillable entanglement of...
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Novel Highly Thermostable Endolysin from Thermus scotoductus MAT2119 Bacteriophage Ph2119 with Amino Acid Sequence Similarity to Eukaryotic Peptidoglycan Recognition Proteins
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Phosphoroorganic Metal Complexes in Therapeutics
PublicationThe present mini-review highlights recent developments on antitumor activity of metal-based therapeutics which have been a subject of researches for the last few decades. In 1965, Rosenberg found that during an electrolysis on platinum electrodes a complex of Pt is generated which inhibited to a great extent a binary fission in Escherichia coli bacteria. This discovery started a new chapter in medicinal chemistry and the interesting...
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The use of machine learning for face regions detection in thermograms
PublicationThe aim of this study is to analyse the methods of detecting characteristic points of the face in thermographic images. As part of the implementation an extensive analysis of scientific publications covering similar issues both for the analysis of images made in visible light and thermographic images was carried out. On the basis of this analysis, 3 models were selected and then they were implemented and tested on the basis of...
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Thermogravimetric analysis/ pyrolysis of used tyres and waste rubber
PublicationThe process of pyrolysis is investigated in this paper. The pyrolysis results of two samples: waste tyres and rubber at different heating rates (10, 20, 50 K/min), were compared. In other experiments the degradation of two pyrolysis products, char and oil was examined. The kinetic study using the thermogravimetry equipment (TG) was done, which allowed determination of the kinetic mechanism of the process. The elemental analysis...
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The effect of CeO2 on the thermal stability, structure and thermoluminescence and optically stimulated luminescence properties of barium borate glass
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Nonlocalized thermal behavior of rotating micromachined beams under dynamic and thermodynamic loads
PublicationRotating micromachined beams are one of the most practical devices with several applications from power generation to aerospace industries. Moreover, recent advances in micromachining technology have led to huge interests in fabricating miniature turbines, gyroscopes and microsensors thanks to their high quality/reliability performances. To this end, this article is organized to examine the axial dynamic reaction of a rotating...
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Experimental investigation of a two-phase thermosiphon.
PublicationPrzedstawiono wyniki badań dwufazowego, termosyfonowego wymiennika ciepła. W szczególności uwzględniono wpływ podziałki rur oraz wartość ciśnienia w płaszczu na gęstość przenoszonego strumienia ciepła.
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Substrate Reduction Therapies for Mucopolysaccharidoses
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Theoretical study of thermofrictional oscillations due to negative friction-temperature characteristic
PublicationAnalytical study on oscillations of a body on a moving counterbody has been done by assuming imperfect frictional thermal contact and friction that decreases with contact temperature. It has been shown that stick-slip oscillation occurs due to decrease of friction coefficient when the body moves in the opposite direction to the counterbody. Dynamical characteristics, such as conditions for stable sliding and limit cycles, have...
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Production of gaseous matrix-free reference materials. Application of thermoanalytical techniques
PublicationMateriały odniesienia są wykorzystywane w każdym laboratorium w celu zapewnienia jakości wyników pomiarów analitycznych. Produkcja materiałów odniesienia nie jest zadaniem łatwym, szczególnie w przypadku składników gazowych, toksycznych i o nieprzyjemnym zapachu. Termiczny rozkład związków powierzchniowych jest bardzo dogodnym sposobem sporządzania właśnie tego rodzaju mieszanin. Ważną rolę w procesie termicznego rozkładu związków...
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On rotary inertia of microstuctured beams and variations thereof
PublicationWe discuss the classic rotary inertia notion and extend it for microstructured beams introducing new microinertia parameters as an additional dynamic response to microstructure changes. Slender structures made of beam- or platelet-lattice metamaterials may exhibit not only large translations and rotations but also general deformations of inner structure. Here we considered a few examples of beam-like structures and derive their...
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Non-proportionality and thermoluminescence of LSO:Ce
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Morphology, Mechanical and Thermal Properties of Thermoplastic Polyurethane Containing Reduced Graphene Oxide and Graphene Nanoplatelets
PublicationPolyurethane/graphene nanocomposites were synthesized using commercial thermoplastic polyurethane (TPU, Apilon 52DE55), and two types of graphene derivatives: graphene nanoplatelets (GNP) and reduced graphene oxide (RGO). Fourier Transformation Infrared Spectroscopy Fourier Transformation Infrared Spectroscopy (FTIR) spectroscopy, TEM, and SEM microscopy and XRD techniques were used to chemically and structurally characterize GNP...
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A LABORATORY STAND FOR THE ANALYSIS OF DYNAMIC PROPERTIES OF THERMOCOUPLES
PublicationIn the present elaboration, problems connected with measurements of high variable temperatures of gases are introduced and the impact of dynamic properties of different construction solutions of thermoelements on the accuracy of the measurements is considered. A laboratory stand built within research under doctoral thesis, destined for analysis of dynamic properties of thermocouples is also described. Results of numerical simulation...
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Study of the influence of thermal factors on the welding process of polyethylene gas pipelines,
PublicationA one-dimensional calculation scheme is proposed with the help of which it is possible to determine and set the technological parameters with the accuracy to be realized in production conditions: the temperature of the heating element and the heating time, which allows maximum mechanization of the technological operations of polyethylene gas pipelines welding. The numerical value of the coefficient of temperature for polyethylene...