Filters
total: 2393
filtered: 170
Search results for: NUMERICAL TAXONOMY
-
ITS1 and ITS2 sequences alignment of Oncidium Sw. species
Open Research DataComparison of internal transcribed spacer ( ITS1; ITS2) sequences of 40 species of Oncidium S..w. Alignment was created using Clustal Omega ver.1.2.4 in SnapGene software 7.1.1.
-
Dataset of phase portraits of the fractional prey-predator model with Holling type-II interaction (without predator harvesting)
Open Research DataThe need for a fractional generalization of a given classical model is often due to new behaviors which cannot be taken into account by the model. In this situation, it can be useful to look for a fractional deformation of the initial system, trying to fit the fractional exponent of differentiation in order to catch properly the data.
-
Physicochemical and photocatalytic data of Nb-doped faceted TiO2
Open Research DataRaw numerical data, obtained from the physicochemical measurements (XRD, DR-UV/Vis, EPR) and numerical data on photocatalytic activity (phenol degradation and 4-nitrophenol reduction) extracted from the HPLC-DAD results, obtained for the TiO2 nanoparticles that expose majority of the {0 0 1}, {1 0 0} or {1 0 1} facets and were doped with the nominal...
-
A Fortran-95 algorithm to solve the three-dimensional Higgs boson equation in the de Sitter space-time
Open Research DataA numerically efficient finite-difference technique for the solution of a fractional extension of the Higgs boson equation in the de Sitter space-time is designed. The model under investigation is a multidimensional equation with Riesz fractional derivatives of orders in (0,1)U(1,2], which considers a generalized potential and a time-dependent diffusion...
-
Stochastic intervals for the family of quadratic maps
Open Research DataNumerical analysis of chaotic dynamics is a challenging task. The one-parameter families of logistic maps and closely related quadratic maps f_a(x)=a-x^2 are well-known examples of such dynamical systems. Determining parameter values that yield stochastic-like dynamics is especially difficult, because although this set has positive Lebesgue measure,...
-
Characteristics of selected Anabaena isolates from CCNP Collection
Open Research DataEN: This dataset includes information about Anabaena strains (cyanobacteria) deposited in the Culture Collection of Northern Poland (CCNP), at the Division of Marine Biotechnology, Institute of Oceanography, University of Gdańsk, Poland. Presented data concern Anabaena strains their (1) isolation and culture conditions, (2) taxonomic position, (3) morphology...
-
Characteristics of selected Nodularia spumigena isolates from CCNP Collection
Open Research DataEN: This dataset includes information about Nodularia spumigena strains (Cyanobacteria) deposited in the Culture Collection of Northern Poland (CCNP), at the Division of Marine Biotechnology, Institute of Oceanography, University of Gdańsk, Poland. Presented data concern Nodularia spumigena strains, their (1) isolation and culture conditions, (2) taxonomic...
-
Phytoplankton in the Kashubian Lakes – microscopic photo archive
Open Research DataPhytoplankton is a group of microscopic plant organisms passively floating in water. The organisms included in the phytoplankton of lakes include the following main taxonomic groups: cyanobacteria (Cyanobacteria), green algae (Chlorophyta), dinoflagellates (Dinophyta), diatoms (Bacillariophyceae), cryptophytes (Cryptophyta), chrysophytes (Chrysophyceae)...
-
Long-term hindcast simulation of sea ice in the Baltic Sea
Open Research DataThe data set contains the results of numerical modeling of sea ice over a period of 50 years (1958-2007) in the Baltic Sea. A long-term hindcast simulation was performed using a three-dimensional hydrodynamic model PM3D (Kowalewski and Kowalewska-Kalkowska, 2017), a new version of the M3D model (Kowalewski, 1997). A numerical dynamic-thermodynamic model...
-
Hydrodynamic reanalysis of ice conditions in the Baltic Sea using the PM3D model
Open Research DataThe dataset contains the results of numerical modeling of sea ice in the Baltic Sea since 1998. A long-term reanalysis was performed using the three-dimensional hydrodynamic model PM3D (Kowalewski and Kowalewska-Kalkowska, 2017), a new version of the M3D model (Kowalewski, 1997). A numerical dynamic-thermodynamic model of sea ice (Herman et al. 2011)...
-
Long-term hindcast simulation of sea level in the Baltic Sea
Open Research DataThe dataset contains the results of numerical modelling of sea level fluctuations over a period of 50 years (1958-2007) in the Baltic Sea. A long-term hindcast simulation was performed using a three-dimensional hydrodynamic model PM3D (Kowalewski and Kowalewska-Kalkowska, 2017), a new version of the M3D model (Kowalewski, 1997). The hydrodynamic model...
-
The effect of roasting beetroot and chicory on the anti-oxidative activity of their extracts
Open Research DataThe eThe data set presents the results of the assessment of the impact of roasting raw materials in the form of beetroot and chicory on their antioxidant activity measured by the standard ABTS and DPPH radical tests. The numerical results were compared with the visual assessment of the roasted raw materials. The obtained results confirmed the increase...
-
Database of the illustrative simulations of the nonstandard approximation of the generalized Burgers–Huxley equation
Open Research DataThe presented dataset is a result of numerical analysis of a generalized Burgers–Huxley partial differential equation. An analyzed diffusive partial differential equation consist with nonlinear advection and reaction. The reaction term is a generalized form of the reaction law of the Hodgkin–Huxley model, while the advection is a generalized form of...
-
Long-term hindcast simulation of water temperature and salinity in the Baltic Sea
Open Research DataThe dataset contains the results of numerical modelling of water temperature and salinity over a period of 50 years (1958-2007) in the Baltic Sea. A long-term hindcast simulation was performed using a three-dimensional hydrodynamic model PM3D (Kowalewski and Kowalewska-Kalkowska, 2017), a new version of the M3D model (Kowalewski, 1997). The hydrodynamic...
-
Long-term hindcast simulation of currents in the Baltic Sea
Open Research DataThe dataset contains the results of numerical modelling of currents over a period of 50 years (1958-2007) in the Baltic Sea . A long-term hindcast simulation was performed using a three-dimensional hydrodynamic model PM3D (Kowalewski and Kowalewska-Kalkowska, 2017), a new version of the M3D model (Kowalewski, 1997). The hydrodynamic model was coupled...
-
Hydrodynamic reanalysis of water temperature and salinity in the Baltic Sea using the PM3D model
Open Research DataThe dataset contains the results of numerical modeling of water temperature and salinity in the Baltic Sea since 1998. A long-term reanalysis was performed using the three-dimensional hydrodynamic model PM3D (Kowalewski and Kowalewska-Kalkowska, 2017), a new version of the M3D model (Kowalewski, 1997). A numerical dynamic-thermodynamic model of sea...
-
Monthly mean concentration of chlorophyll a on the sea surface of the Baltic Sea
Open Research DataMonthly mean surface concentration of chlorophyll a in the years 2003-2022 calculated on the basis of data from the SatBaltic System (https://satbaltyk.iopan.gda.pl/). Maps of monthly average values with a resolution of 1 km were derived from daily satellite data from the Moderate Resolution Imaging Spectroradiometer (MODIS). Gaps in satellite images...
-
XLS file with the initial data on the dome's geometry outline
Open Research DataThis dataset consists of an XLS file with the initial data on the dome's geometry outline.
-
Autodesk AUTOCAD file with the dome's geometry outline
Open Research DataThis dataset consists of an Autodesk AUTOCAD file with the dome's geometry outline.The studies carried out in the "Miniatura 7" scientific grant were devoted to both experimental and theoretical (numerical) measurements executed on a tensegrity dome model (with a Fuller-type grid) to identify the changes in the state of displacements, induced by the...
-
Simulations of flows in the coastal zone of the Baltic Sea
Open Research DataThe study area is located in the Southern Baltic, within Polish Marine Areas, adjacent to the coastline in the vicinity of Lubiatowo village, where The Coastal Research Station (CRS) – a field laboratory of the Institute of Hydro-Engineering of the Polish Academy of Sciences (IBW PAN) –is situated. The numerical reconstruction of the coastal flow was...
-
The initial FEM model of the dome assembled in SOFiSTiK FEA (2020) software
Open Research DataThis dataset consists of an archive with the (selected) files of the initial FEM model of the dome assembled in SOFiSTiK FEA (2020) software.
-
XLS file with the key results from the experimental analysis of the imperfect dome's state of displacements
Open Research DataThis dataset consists of an XLS file with the key results from the experimental analysis of the imperfect dome's state of displacements.
-
Photos and movies regarding the dome's real-life model assembly and tests
Open Research DataThis dataset consists of an archive with the photos and movies regarding the dome's real-life model assembly and tests.
-
Results of timber material tests from a strength testing machine
Open Research DataThis dataset consists of an archive with TRA files with the results of timber (wooden rolls) material tests from an universal strength testing machine.
-
Validation of lumbar spine finite element model
Open Research DataThe functional biomechanics of the lumbar spine have been better understood by finite element method (FEM) simulations. However, there are still areas where the behavior of soft tissues can be better modeled or described in a different way. The purpose of this research is to develop and validate a lumbar spine section intended for biomechanical research....
-
Recurrence times in the Morse sets for a two-dimensional discrete neuron model (low resolution)
Open Research DataThis dataset contains selected results of rigorous numerical computations conducted in the framework of the research described in the paper “Topological-numerical analysis of a two-dimensional discrete neuron model” by Paweł Pilarczyk, Justyna Signerska-Rynkowska and Grzegorz Graff. A preprint of this paper is available at https://doi.org/10.48550/arXiv.2209.03443.
-
Monthly mean sea surface temperature (SST) of the Baltic Sea
Open Research DataMonthly mean sea surface temperature (SST) from 2001 to 2022 calculated from data from the SatBaltic System (https://satbaltyk.iopan.gda.pl/). The spatial resolution of the maps is 1 km. The calculation of monthly mean values at each pixel was based on four SST maps on each day of the month. The primary source of SST information was satellite data collected...
-
Hydrodynamic reanalysis of currents in the Baltic Sea using the PM3D model
Open Research DataThe dataset contains the results of numerical modeling of currents in the Baltic Sea since 1998. A long-term reanalysis was performed using a three-dimensional hydrodynamic model PM3D (Kowalewski and Kowalewska-Kalkowska, 2017), a new version of the M3D model (Kowalewski, 1997).
-
Analysis of the Water Level Variation at the Polish Part of the Vistula Lagoon (2008-2017)
Open Research DataThe dataset consists of the following data:
-
Morse decompositions for a two-dimensional discrete neuron model (low resolution)
Open Research DataThis dataset contains selected results of rigorous numerical computations conducted in the framework of the research described in the paper “Topological-numerical analysis of a two-dimensional discrete neuron model” by Paweł Pilarczyk, Justyna Signerska-Rynkowska and Grzegorz Graff. A preprint of this paper is available at https://doi.org/10.48550/arXiv.2209.03443.
-
Morse decompositions for a two-dimensional discrete neuron model (limited range)
Open Research DataThis dataset contains selected results of rigorous numerical computations conducted in the framework of the research described in the paper “Topological-numerical analysis of a two-dimensional discrete neuron model” by Paweł Pilarczyk, Justyna Signerska-Rynkowska and Grzegorz Graff. A preprint of this paper is available at https://doi.org/10.48550/arXiv.2209.03443.
-
Morse decompositions for a two-dimensional discrete neuron model (full range)
Open Research DataThis dataset contains selected results of rigorous numerical computations conducted in the framework of the research described in the paper “Topological-numerical analysis of a two-dimensional discrete neuron model” by Paweł Pilarczyk, Justyna Signerska-Rynkowska and Grzegorz Graff. A preprint of this paper is available at https://doi.org/10.48550/arXiv.2209.03443.
-
Hydrodynamic reanalysis of sea level in the Baltic Sea using the PM3D model
Open Research DataThe data set contains the results of numerical modelling of sea level fluctuations in the Baltic Sea in the Baltic Sea since 1998. A long-term reanalysis was performed using a three-dimensional hydrodynamic model PM3D (Kowalewski and Kowalewska-Kalkowska, 2017), a new version of the M3D model (Kowalewski, 1997).
-
St. Adalberd church 3D point model
Open Research DataResearch data show the church of St. Adalbert in Gdansk, Poland. Two layers are presented in the .zip file: one represents the laser scanning result, the second represents the point cloud from 36 photogrammetry images from the UAV system. The aligned point clouds formed the basis to create the high-resolution 3D model. Reference data are laser scanning...
-
Magnetic signature reproduction of ferromagnetic ships at arbitrary geographical position, direction and depth using a multi-dipole model – source and verification dataset with description
Open Research DataThe dataset include source synthetic magnetic data concerning the corvette-type ship numeric model. The data are for 6 locations around the World with different V1 ÷ V6 Earth magnetic field values. The attached data is in Matlab. MAT format, but the data can also be used in Octave software.
-
An facile Fortran-95 algorithm to simulate complex instabilities in three-dimensional hyperbolic systems
Open Research DataIt is well know that the simulation of fractional systems is a difficult task from all points of view. In particular, the computer implementation of numerical algorithms to simulate fractional systems of partial differential equations in three dimensions is a hard task which has no been solved satisfactorily. Here, we provide a Fortran-95 code to solve...
-
Microalgal strains from the Culture Collection of Baltic Algae (CCBA)
Open Research DataThe dataset contains information on the cyanobacterial and microalgal strains maintained at the Culture Collection of Baltic Algae (CCBA) at the Institute of Oceanography UG. The collection maintains cyanobacterial and algal strains isolated from the Baltic Sea and additionally several strains collected from a wide range of habitats. The culture collection...
-
Conley-Morse graphs for a two-dimensional discrete neuron model (low resolution)
Open Research DataThis dataset contains selected results of rigorous numerical computations conducted in the framework of the research described in the paper “Topological-numerical analysis of a two-dimensional discrete neuron model” by Paweł Pilarczyk, Justyna Signerska-Rynkowska and Grzegorz Graff. A preprint of this paper is available at https://doi.org/10.48550/arXiv.2209.03443.
-
Conley-Morse graphs for a two-dimensional discrete neuron model (limited range)
Open Research DataThis dataset contains selected results of rigorous numerical computations conducted in the framework of the research described in the paper “Topological-numerical analysis of a two-dimensional discrete neuron model” by Paweł Pilarczyk, Justyna Signerska-Rynkowska and Grzegorz Graff. A preprint of this paper is available at https://doi.org/10.48550/arXiv.2209.03443.
-
Conley-Morse graphs for a two-dimensional discrete neuron model (full range)
Open Research DataThis dataset contains selected results of rigorous numerical computations conducted in the framework of the research described in the paper “Topological-numerical analysis of a two-dimensional discrete neuron model” by Paweł Pilarczyk, Justyna Signerska-Rynkowska and Grzegorz Graff. A preprint of this paper is available at https://doi.org/10.48550/arXiv.2209.03443.
-
PA32 aluminum alloy - tensile properties
Open Research DataIn addition to steel, aluminium alloys are the main building material used in the shipbuilding industry. Due to its undoubted advantages, such as low density (nearly three times lower than in the case of steel for shipbuilding) and high corrosion resistance, it is often used for hulls of yachts and small vessels as well as superstructures. For safety...
-
Strucutral steel - tensile test results
Open Research DataModern floating structures such as ships, oil platforms and offshore wind towers are built mostly of structural steel. It is a material that is subject to requirements which, when met, allows the construction and safe operation of the structure throughout its entire work cycle. One of the basic criteria that a material must meet is its strength. The...
-
Phylogenetic trees of genus Oncidium Sw. based on analysis of DNA sequences
Open Research DataGenus Oncidium Sw. is widely regarded as a polyphiletic, and the taxonomic boundaries between him and such genera as Odontoglossum Kunth. or Miltonia Lindley remain blurred. The goal of the study was to determine the phylogenetic relationships within the genus Oncidium s.lato based on the DNA sequences analysis. The correlation between molecular data...
-
Electron energy-loss spectra of isoxazole
Open Research DataThe data set contains numeric values of electron energy-loss spectra measured in isoxazole in the excitation energy range 3.5−10 eV. The data have been published in graphical form (figure 3 and figure 4) in the following paper:Ireneusz Linert, Mariusz Zubek "Excited states of isoxazole molecules studied by electron energy-loss spectroscopy"Journal...
-
Electron energy-loss spectra of pyridazine
Open Research DataThe data set contains numeric values of electron energy-loss spectra measured in pyridazine in the excitation energy range 2.5−10 eV. The data have been published in graphical form (figures 3 - 6) in the following paper:
-
Herbarium of Division of Marine Biology and Ecology University of Gdańsk (DMBE)
Open Research DataHerbarium of Division of Marine Biology and Ecology University of Gdańsk (DMBE) is a research herbarium encompassing specimens of vascular plants and algae hosted by the Laboratory of Marine Plant Ecology at University of Gdańsk, Poland. The aim of Herbarium is to preserve marine plant and algae collections mostly from the Gulf of Gdańsk, but the herbarium...
-
A collection of directed graphs for the minimum cycle mean weight computation
Open Research DataThis dataset contains definitions of the 16 directed graphs with weighted edges that were described in the following paper: Paweł Pilarczyk, A space-efficient algorithm for computing the minimum cycle mean in a directed graph, Journal of Mathematics and Computer Science, 20 (2020), no. 4, 349--355, DOI: 10.22436/jmcs.020.04.08, URL: http://dx.doi.org/10.22436/jmcs.020.04.08 These...
-
EH36 steel for shipbuilding (plate thicnkness 30 mm) - 3D fracture scan
Open Research DataThe basic method of ductility designation of structural steels is the Charpy impact test. The test consists of a single strike of the specimen using a Charpy pendulum. Its result is the value of work necessary to break a specimen at a test temperature. Despite its many advantages, such as its short implementation time and low costs, it has its disadvantages,...
-
Angular welding distortion - one sided fillet weld
Open Research DataWelding is the basic method of joining ship hull elements during its construction. However, this method of joining structural elements generates shrinks. Shrinks causes deformation of the entire welded structure, both linear and angular. In the shipbuilding industry, there is a tendency to oversize fillet welds, at the design as well as manufacturing...
-
Simulations of wave propagation and attenuation in fields of colliding ice floes
Open Research DataThis dataset contains results of numerical smulations of sea ice-wave interactions, corresponding to laboratory experiments conducted at the Large Ice Model Basin (LIMB) at the Hamburg Ship Model Basin (HSVA) as part of the LS-WICE ("Loads on Structure and Waves in Ice"; https://zenodo.org/record/1067170#.XrLt_dhpxhE) project. THe simulations were conducted...