Search
Filters
total: 11771
-
Catalog
- Publications 9698 available results
- Journals 336 available results
- Conferences 82 available results
- People 204 available results
- Projects 17 available results
- Laboratories 1 available results
- Research Teams 1 available results
- e-Learning Courses 213 available results
- Events 13 available results
- Open Research Data 1206 available results
displaying 1000 best results Help
Search results for: —TRANSFER LEARNING, DEEP LEARNING, PROTEIN STRUCTURE, FUNCTION, AND INTERACTION PREDICTION, SEQUENCE MODELLING
-
MP3vec: A Reusable Machine-Constructed Feature Representation for Protein Sequences
Publication—Machine Learning (ML) methods have been used with varying degrees of success on protein prediction tasks, with two inherent limitations. First, prediction performance often depends upon the features extracted from the proteins. Second, experimental data may be insufficient to construct reliable ML models. Here we introduce MP3vec, a transferable representation for protein sequences that is designed to be used specifically for sequence-to-sequence...
-
Impact of AlphaFold on structure prediction of protein complexes: The CASP15‐CAPRI experiment
PublicationWe present the results for CAPRI Round 54, the 5th joint CASP-CAPRI protein assembly prediction challenge. The Round offered 37 targets, including 14 homodimers, 3 homo-trimers, 13 heterodimers including 3 antibody–antigen complexes, and 7 large assemblies. On average 70 CASP and CAPRI predictor groups, including more than 20 automatics servers, submitted models for each target. A total of 21 941 models submitted by these groups...
-
Poprawa jakości klasyfikacji głębokich sieci neuronowych poprzez optymalizację ich struktury i dwuetapowy proces uczenia
PublicationW pracy doktorskiej podjęto problem realizacji algorytmów głębokiego uczenia w warunkach deficytu danych uczących. Głównym celem było opracowanie podejścia optymalizującego strukturę sieci neuronowej oraz zastosowanie uczeniu dwuetapowym, w celu uzyskania mniejszych struktur, zachowując przy tym dokładności. Proponowane rozwiązania poddano testom na zadaniu klasyfikacji znamion skórnych na znamiona złośliwe i łagodne. W pierwszym...
-
Deep Learning: A Case Study for Image Recognition Using Transfer Learning
PublicationDeep learning (DL) is a rising star of machine learning (ML) and artificial intelligence (AI) domains. Until 2006, many researchers had attempted to build deep neural networks (DNN), but most of them failed. In 2006, it was proven that deep neural networks are one of the most crucial inventions for the 21st century. Nowadays, DNN are being used as a key technology for many different domains: self-driven vehicles, smart cities,...
-
Deep Learning Basics 2023/24
e-Learning CoursesA course about the basics of deep learning intended for students of Computer Science. It includes an introduction to supervised machine learning, the architecture of basic artificial neural networks and their training algorithms, as well as more advanced architectures (convolutional networks, recurrent networks, transformers) and regularization and optimization techniques.
-
Deep Learning
PublicationDeep learning (DL) is a rising star of machine learning (ML) and artificial intelligence (AI) domains. Until 2006, many researchers had attempted to build deep neural networks (DNN), but most of them failed. In 2006, it was proven that deep neural networks are one of the most crucial inventions for the 21st century. Nowadays, DNN are being used as a key technology for many different domains: self-driven vehicles, smart cities,...
-
Olgun Aydin dr
PeopleOlgun Aydin finished his PhD by publishing a thesis about Deep Neural Networks. He works as a Principal Machine Learning Engineer in Nike, and works as Assistant Professor in Gdansk University of Technology in Poland. Dr. Aydin is part of editorial board of "Journal of Artificial Intelligence and Data Science" Dr. Aydin served as Vice-Chairman of Why R? Foundation and is member of Polish Artificial Intelligence Society. Olgun is...
-
Neural networks and deep learning
PublicationIn this chapter we will provide the general and fundamental background related to Neural Networks and Deep Learning techniques. Specifically, we divide the fundamentals of deep learning in three parts, the first one introduces Deep Feed Forward Networks and the main training algorithms in the context of optimization. The second part covers Convolutional Neural Networks (CNN) and discusses their main advantages and shortcomings...
-
Machine learning-based prediction of seismic limit-state capacity of steel moment-resisting frames considering soil-structure interaction
PublicationRegarding the unpredictable and complex nature of seismic excitations, there is a need for vulnerability assessment of newly constructed or existing structures. Predicting the seismic limit-state capacity of steel Moment-Resisting Frames (MRFs) can help designers to have a preliminary estimation and improve their views about the seismic performance of the designed structure. This study improved data-driven decision techniques in...
-
Machine learning-based prediction of residual drift and seismic risk assessment of steel moment-resisting frames considering soil-structure interaction
PublicationNowadays, due to improvements in seismic codes and computational devices, retrofitting buildings is an important topic, in which, permanent deformation of buildings, known as Residual Interstory Drift Ratio (RIDR), plays a crucial role. To provide an accurate yet reliable prediction model, 32 improved Machine Learning (ML) algorithms were considered using the Python software to investigate the best method for estimating Maximum...
-
Deep Learning w Keras
e-Learning CoursesKurs przeznaczony dla słuchaczy studiów podyplomowych Sztuczna inteligencja i automatyzacja procesów biznesowych w ujęciu praktycznym - edycja biznesowa.
-
Deep learning in the fog
PublicationIn the era of a ubiquitous Internet of Things and fast artificial intelligence advance, especially thanks to deep learning networks and hardware acceleration, we face rapid growth of highly decentralized and intelligent solutions that offer functionality of data processing closer to the end user. Internet of Things usually produces a huge amount of data that to be effectively analyzed, especially with neural networks, demands high...
-
Wiktoria Wojnicz dr hab. inż.
PeopleDSc in Mechanics (in the field of Biomechanics) - Lodz Univeristy of Technology, 2019 PhD in Mechanics (in the field of Biomechanics) - Lodz Univeristy of Technology, 2009 (with distinction) List of papers (2009 - ) Wojnicz W., Wittbrodt E., Analysis of muscles' behaviour. Part I. The computational model of muscle. Acta of Bioengineering and Biomechanics, Vol. 11, No.4, 2009, p. 15-21 Wojnicz W., Wittbrodt E., Analysis of...
-
Active Learning on Ensemble Machine-Learning Model to Retrofit Buildings Under Seismic Mainshock-Aftershock Sequence
PublicationThis research presents an efficient computational method for retrofitting of buildings by employing an active learning-based ensemble machine learning (AL-Ensemble ML) approach developed in OpenSees, Python and MATLAB. The results of the study shows that the AL-Ensemble ML model provides the most accurate estimations of interstory drift (ID) and residual interstory drift (RID) for steel structures using a dataset of 2-, to 9-story...
-
Machine Learning and Deep Learning Methods for Fast and Accurate Assessment of Transthoracic Echocardiogram Image Quality
PublicationHigh-quality echocardiogram images are the cornerstone of accurate and reliable measurements of the heart. Therefore, this study aimed to develop, validate and compare machine learning and deep learning algorithms for accurate and automated assessment of transthoracic echocardiogram image quality. In total, 4090 single-frame two-dimensional transthoracic echocardiogram...
-
Data augmentation for improving deep learning in image classification problem
PublicationThese days deep learning is the fastest-growing field in the field of Machine Learning (ML) and Deep Neural Networks (DNN). Among many of DNN structures, the Convolutional Neural Networks (CNN) are currently the main tool used for the image analysis and classification purposes. Although great achievements and perspectives, deep neural networks and accompanying learning algorithms have some relevant challenges to tackle. In this...
-
Breast MRI segmentation by deep learning: key gaps and challenges
PublicationBreast MRI segmentation plays a vital role in early diagnosis and treatment planning of breast anomalies. Convolutional neural networks with deep learning have indicated promise in automating this process, but significant gaps and challenges remain to address. This PubMed-based review provides a comprehensive literature overview of the latest deep learning models used for breast segmentation. The article categorizes the literature...
-
Basics of Deep Learning 24/25
e-Learning Courses -
Personal bankruptcy prediction using machine learning techniques
PublicationIt has become crucial to have an early prediction model that provides accurate assurance for users about the financial situation of consumers. Recent studies have focused on predicting corporate bankruptcies and credit defaults, not personal bankruptcies. Due to this situation, the present study fills the literature gap by comparing different machine learning algorithms to predict personal bankruptcy. The main objective of the...
-
Deep learning for ultra-fast and high precision screening of energy materials
PublicationSemiconductor materials for energy storage are the core and foundation of modern information society and play important roles in photovoltaic system, integrated circuit, spacecraft technology, lighting applications, and other fields. Unfortunately, due to the long experiment period and high calculation cost, the high-precision band gap (the basic characteristic parameter) of semiconductor is difficult to obtain, which hinders the...
-
A Review on Machine Learning Deployment Patterns and Key Features in the Prediction of Preeclampsia
PublicationPrevious reviews have investigated machine learning (ML) models used to predict the risk of developing preeclampsia. However, they have not addressed the intended deployment of these models throughout pregnancy, nor have they detailed feature performance. This study aims to provide an overview of existing ML models and their intended deployment patterns and performance, along with identified features of high importance. This review...
-
Model-free and Model-based Reinforcement Learning, the Intersection of Learning and Planning
PublicationMy doctoral dissertation is intended as the compound of four publications considering: structure and randomness in planning and reinforcement learning, continuous control with ensemble deep deterministic policy gradients, toddler-inspired active representation learning, and large-scale deep reinforcement learning costs.
-
Interpretable deep learning approach for classification of breast cancer - a comparative analysis of multiple instance learning models
PublicationBreast cancer is the most frequent female cancer. Its early diagnosis increases the chances of a complete cure for the patient. Suitably designed deep learning algorithms can be an excellent tool for quick screening analysis and support radiologists and oncologists in diagnosing breast cancer.The design of a deep learning-based system for automated breast cancer diagnosis is not easy due to the lack of annotated data, especially...
-
Comparison of Deep Learning Approaches in Classification of Glacial Landforms
PublicationGlacial landforms, created by the continuous movements of glaciers over millennia, are crucial topics in geomorphological research. Their systematic analysis affords invaluable insights into past climatic oscillations and augments understanding of long-term climate change dynamics. The classification of these types of terrain traditionally depends on labor-intensive manual or semi-automated methods. However, the emergence of automated...
-
Generation of microbial colonies dataset with deep learning style transfer
Publication -
Interpretable Deep Learning Model for the Detection and Reconstruction of Dysarthric Speech
PublicationWe present a novel deep learning model for the detection and reconstruction of dysarthric speech. We train the model with a multi-task learning technique to jointly solve dysarthria detection and speech reconstruction tasks. The model key feature is a low-dimensional latent space that is meant to encode the properties of dysarthric speech. It is commonly believed that neural networks are black boxes that solve problems but do not...
-
Optimized Deep Learning Model for Flood Detection Using Satellite Images
PublicationThe increasing amount of rain produces a number of issues in Kerala, particularly in urban regions where the drainage system is frequently unable to handle a significant amount of water in such a short duration. Meanwhile, standard flood detection results are inaccurate for complex phenomena and cannot handle enormous quantities of data. In order to overcome those drawbacks and enhance the outcomes of conventional flood detection...
-
Deep learning techniques for biometric security: A systematic review of presentation attack detection systems
PublicationBiometric technology, including finger vein, fingerprint, iris, and face recognition, is widely used to enhance security in various devices. In the past decade, significant progress has been made in improving biometric sys- tems, thanks to advancements in deep convolutional neural networks (DCNN) and computer vision (CV), along with large-scale training datasets. However, these systems have become targets of various attacks, with...
-
Deep Learning-Based, Multiclass Approach to Cancer Classification on Liquid Biopsy Data
PublicationThe field of cancer diagnostics has been revolutionized by liquid biopsies, which offer a bridge between laboratory research and clinical settings. These tests are less invasive than traditional biopsies and more convenient than routine imaging methods. Liquid biopsies allow studying of tumor-derived markers in bodily fluids, enabling the development of more precise cancer diagnostic tests for screening, disease monitoring, and...
-
Training of Deep Learning Models Using Synthetic Datasets
PublicationIn order to solve increasingly complex problems, the complexity of Deep Neural Networks also needs to be constantly increased, and therefore training such networks requires more and more data. Unfortunately, obtaining such massive real world training data to optimize neural networks parameters is a challenging and time-consuming task. To solve this problem, we propose an easy-touse and general approach to training deep learning...
-
E-learning courses
e-Learning CoursesStrona zawiera zbiór kursów prowadzonych metodą e-learning. Kursy te są skierowane do studentów I stopnia kierunku informatyka na VII semestrze profilu Bazy danych, do studentów na kierunku informatyka na II semestrze studiów II stopnia na specjalności ZAD i ISI.
-
Data, Information, Knowledge, Wisdom Pyramid Concept Revisited in the Context of Deep Learning
PublicationIn this paper, the data, information, knowledge, and wisdom (DIKW) pyramid is revisited in the context of deep learning applied to machine learningbased audio signal processing. A discussion on the DIKW schema is carried out, resulting in a proposal that may supplement the original concept. Parallels between DIWK pertaining to audio processing are presented based on examples of the case studies performed by the author and her collaborators....
-
Deep learning for recommending subscription-limited documents
PublicationDocuments recommendation for a commercial, subscription-based online platform is important due to the difficulty in navigation through a large volume and diversity of content available to clients. However, this is also a challenging task due to the number of new documents added every day and decreasing relevance of older contents. To solve this problem, we propose deep neural network architecture that combines autoencoder with...
-
Deep learning based thermal image segmentation for laboratory animals tracking
PublicationAutomated systems for behaviour classification of laboratory animals are an attractive alternative to manual scoring. However, the proper animals separation and tracking, especially when they are in close contact, is the bottleneck of the behaviour analysis systems. In this paper, we propose a method for the segmentation of thermal images of laboratory rats that are in close contact during social behaviour tests. For this, we are...
-
Channel State Estimation in LTE-Based Heterogenous Networks Using Deep Learning
PublicationFollowing the continuous development of the information technology, the concept of dense urban networks has evolved as well. The powerful tools, like machine learning, break new ground in smart network and interface design. In this paper the concept of using deep learning for estimating the radio channel parameters of the LTE (Long Term Evolution) radio interface is presented. It was proved that the deep learning approach provides...
-
Machine learning for PhD students
e-Learning CoursesAn introductory course in machine learning for PhD students from Department of Geotechnical and Hydraulic Engineering
-
Deep Learning-Based Intrusion System for Vehicular Ad Hoc Networks
PublicationThe increasing use of the Internet with vehicles has made travel more convenient. However, hackers can attack intelligent vehicles through various technical loopholes, resulting in a range of security issues. Due to these security issues, the safety protection technology of the in-vehicle system has become a focus of research. Using the advanced autoencoder network and recurrent neural network in deep learning, we investigated...
-
Machine learning-based prediction of preplaced aggregate concrete characteristics
PublicationPreplaced-Aggregate Concrete (PAC) is a type of preplaced concrete where coarse aggregate is placed in the mold and a Portland cement-sand grout with admixtures is injected to fill the voids. Due to the complex nature of PAC, many studies were conducted to determine the effects of admixtures and the compressive and tensile strengths of PAC. Considering that a prediction tool is needed to estimate the compressive and tensile...
-
Machine learning-based prediction of preplaced aggregate concrete characteristics
PublicationPreplaced-Aggregate Concrete (PAC) is a type of preplaced concrete where coarse aggregate is placed in the mold and a Portland cement-sand grout with admixtures is injected to fill the voids. Due to the complex nature of PAC, many studies were conducted to determine the effects of admixtures and the compressive and tensile strengths of PAC. Considering that a prediction tool is needed to estimate the compressive and tensile strengths...
-
Recent improvements in prediction of protein structure by global optimization of a potential energy function
Publication -
Bimodal deep learning model for subjectively enhanced emotion classification in films
PublicationThis research delves into the concept of color grading in film, focusing on how color influences the emotional response of the audience. The study commenced by recalling state-of-the-art works that process audio-video signals and associated emotions by machine learning. Then, assumptions of subjective tests for refining and validating an emotion model for assigning specific emotional labels to selected film excerpts were presented....
-
Deep Learning-Based LOS and NLOS Identification in Wireless Body Area Networks
PublicationIn this article, the usage of deep learning (DL) in ultra-wideband (UWB) Wireless Body Area Networks (WBANs) is presented. The developed approach, using channel impulse response, allows higher efficiency in identifying the direct visibility conditions between nodes in off-body communication with comparison to the methods described in the literature. The effectiveness of the proposed deep feedforward neural network was checked on...
-
Decision making process using deep learning
PublicationEndüstri 4.0, dördüncü endüstri devrimi veya Endüstriyel Nesnelerin İnterneti (IIoT) olarak adlandırılan sanayi akımı, işletmelere, daha verimli, daha büyük bir esneklikle, daha güvenli ve daha çevre dostu bir şekilde üretim yapma imkanı sunmaktadır. Nesnelerin İnterneti ile bağlantılı yeni teknoloji ve hizmetler birçok endüstriyel uygulamada devrim niteliği taşımaktadır. Fabrikalardaki otomasyon, tahminleyici bakım (PdM – Predictive...
-
Preeclampsia Risk Prediction Using Machine Learning Methods Trained on Synthetic Data
PublicationThis paper describes a research study that investigates the use of machine learning algorithms on synthetic data to classify the risk of developing preeclampsia by pregnant women. Synthetic datasets were generated based on parameter distributions from three real patient studies. Four models were compared: XGBoost, Support Vector Machine (SVM), Random Forest, and Explainable Boosting Machines (EBM). The study found that the XGBoost...
-
Detecting Lombard Speech Using Deep Learning Approach
PublicationRobust Lombard speech-in-noise detecting is challenging. This study proposes a strategy to detect Lombard speech using a machine learning approach for applications such as public address systems that work in near real time. The paper starts with the background concerning the Lombard effect. Then, assumptions of the work performed for Lombard speech detection are outlined. The framework proposed combines convolutional neural networks...
-
LOS and NLOS identification in real indoor environment using deep learning approach
PublicationVisibility conditions between antennas, i.e. Line-of-Sight (LOS) and Non-Line-of-Sight (NLOS) can be crucial in the context of indoor localization, for which detecting the NLOS condition and further correcting constant position estimation errors or allocating resources can reduce the negative influence of multipath propagation on wireless communication and positioning. In this paper a deep learning (DL) model to classify LOS/NLOS...
-
e-Learning - user's guide for students
e-Learning Coursese-Learning - user's guide for students
-
Position Estimation in Mixed Indoor-Outdoor Environment Using Signals of Opportunity and Deep Learning Approach
PublicationTo improve the user's localization estimation in indoor and outdoor environment a novel radiolocalization system using deep learning dedicated to work both in indoor and outdoor environment is proposed. It is based on the radio signatures using radio signals of opportunity from LTE an WiFi networks. The measurements of channel state estimators from LTE network and from WiFi network are taken by using the developed application....
-
Deep Learning Approaches in Histopathology
Publication -
Big Data from Sensor Network via Internet of Things to Edge Deep Learning for Smart City
PublicationData from a physical world is sampled by sensor networks, and then streams of Big Data are sent to cloud hosts to support decision making by deep learning software. In a smart city, some tasks may be assigned to smart devices of the Internet of Things for performing edge computing. Besides, a part of workload of calculations can be transferred to the cloud hosts. This paper proposes benchmarks for division tasks between an edge...