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Search results for: GENOME SIZE
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Circadian Gene Polymorphisms Associated with Breast Cancer Susceptibility
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Cognitive decline in Huntington's disease expansion gene carriers
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Phenotypic consequences of LYS4 gene disruption in Candida albicans
PublicationA BLAST search of the Candida Genome Database with the Saccharomyces cerevisiae LYS4 sequence known to encode homoaconitase (HA) revealed ORFs 19.3846 and 19.11327. Both alleles of the LYS4 gene were sequentially disrupted in Candida albicans BWP17 cells using PCR-based methodology. The null lys4Δ mutant exhibited lysine auxotrophy in minimal medium but was able to grow in the presence of L-Lys and α-aminoadipate, an intermediate...
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Phenotypic consequences of the LYS4 gene disruption in Candida albicans
PublicationThe main scientific purpose of our studies was to verify the hypothesis that homoaconitase (HA) from Candida albicans, an enzyme catalyzing a second step of the α-aminoadipate pathway (AAP) of L-Lys biosynthesis may become a new target for antifungal chemotherapy. Previous studies indicated that the A. fumigatus mutant lacking the functional lysF gene, encoding HA, exhibited attenuated virulence in a low-dose mouse infection model...
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Sea ice floe size and shape data from a very high resolution satellite image (Knox Coast, East Antarctica)
Open Research DataThis dataset contains floe size distribution data from a very high resolution (pixel size: 0.3 m) optical satellite image of sea ice, acquired on 16. Feb. 2019 off the Knox Coast (East Antarctica). The image shows relatively small ice floes produced by wave-induced breakup of landfast ice between the Mill Island and Bowman Island. The ice floes are...
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ArchBGal32cB 441Glu mutein gene analysis dataset
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Built Heritage, Sustainable Development, and Natural Hazards: Flood Protection and UNESCO World Heritage Site Protection Strategies in Krakow, Poland
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Improvement of the Treatment of Loop Structures in the UNRES Force Field by Inclusion of Coupling between Backbone- and Side-Chain-Local Conformational States
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Remediation of Polycyclic Aromatic Hydrocarbons Contaminated Soil Using Combined Ozonation and Peroxy-Acid Treatment in the Site of Abadan Oil Refinery
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Effective calcium doping at the B-site of BaFeO3−δ perovskite: towards low-cost and high-performance oxygen permeation membranes
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The oldest osseous mining tools in Europe? New discoveries from the chocolate flint mine in Orońsko, site 2 (southern Poland)
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Dietary intervention with red beet juice ameliorates side effects resulting from oxidative stress during cancer chemotherapy with doxorubicin
PublicationChemoterapia nowotworów wiąże się ze stymulacją stresu oksydacyjnego, wywołującego niekorzystne efekty uboczne w organizmie. Panuje pogląd, że wprowadzenie do terapii przeciwutleniaczy może te niekorzystne efekty uboczne zmniejszyć. W naszych badaniach jako źródło utleniaczy wykorzystaliśmy sok z buraka ćwikłowego. Pokazaliśmy, że jego zastosowanie w kombinacji z lekiem przeciwnowotworowym doksorubicyną znacznie poprawia efekty...
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A Comparative Study on Methods of Distinction Between Near- and Far-Side Defects as Techniques Used Alongside with the Magnetic Flux Leakage Testing
PublicationResults of the finite element analysis show that a far-side defect in a steel plate, with the depth greater by 10% of the plate thickness than a near-side defect, can produce a very similar magnetic flux leakage (MFL) signal. Due to the fact that a measurement of MFL itself can lead to misclassification of a far-side defect as a near-side one, and thus to underestimation of its depth, a comparative study of three complementary...
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Surgical Site Infection after Breast Surgery: A Retrospective Analysis of 5-Year Postoperative Data from a Single Center in Poland
PublicationBackground and Objectives: Surgical site infection (SSI) is a significant complication of non-reconstructive and reconstructive breast surgery. This study aimed to assess SSI after breast surgery over five years in a single center in Poland. The microorganisms responsible for SSI and their antibiotic susceptibilities were determined. Materials and Methods: Data from 2129 patients acquired over five years postoperatively by the...
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Elgold: gold standard, multi-genre dataset for named entity recognition and linking
Open Research DataThe dataset contains 276 multi-genre texts with marked named entities, which are linked to corresponding Wikipedia articles if available. Each entity was manually verified by at least three people, which makes the dataset a high-quality gold standard for the evaluation of named entity recognition and linking algorithms.
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Correction of far-field measurements obtained in non-anechoic test site
Open Research DataThe dataset contains raw and processed measurements of radiation pattern characteristics performed in non-anechoic regime for two geometrically small antenna structures: a spline-parameterized Vivaldi structure and a compact spline-based monopole. The responses have been obtained at the selected frequencies of interest as a function of mentioned structures...
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ECG measurement in the bathtub - drl on the outside of the bathtub on one side- men
Open Research DataThe measurement data shows the measurement of the ECG signal in water in the bathtub. The data includes the measurement time, the reference ECG signal from the chest, and the ECG signal measured by electrodes placed in the bathtub without contact with the human body. Using the presented data, it is possible to estimate the optimal arrangement of measuring...
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Paulina Duch-Zebrowska MSc
PeopleI spent 15 years of my professional life in London working my way up as an architect to become a design and construction manager. I have designed and supervised the construction of apartments in the legendary Soho, shops on Oxford Street in London and exclusive residences in Windsor. I have a great ability to establish contacts based on mutual respect, at every level of investment, including with the Investor, Designers, and Contractors....
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Inserts amplification for knockout cassette construction
Open Research DataThe goal of the study was to obtain optimal conditions for amplification of upstream and downstream genes fragments and introduce a cleavage site for restriction enzymes into them thanks to which it will be possible to clone fragments into a plasmid containing elements of the knockout cassette. The constructed cassettes will enable the removal of the...
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Beta-2 adrenoreceptor gene polymorphisms and sympathetic outflow in humans
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Cancer Familial Aggregation (CFA) and G446A polymorphism in ARLTS1 gene
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Reproducibility of Finding Enriched Gene Sets in Biological Data Analysis
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Ranking metrics in gene set enrichment analysis: do they matter?
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Newborn screening and gene therapy in SMA: Challenges related to vaccinations
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Vitamin D receptor gene polymorphisms in Alzheimer's disease patients
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Delay induced oscillations in gene expression of Hes1 protein model
PublicationW pracy został omówiony model produkcji białka Hes1. Stężenie Hes1 jest kontrolowane przez ujemne sprzężenie zwrotne wbudowane w białko i jego mRNA. Przeprowadzona analiza potwierdziła znane wyniki numeryczne, że oscylacje wywołane są przez opóźnienie. Pokazaliśmy również, że jeśli współczynnik Hilla jest większy niż 1, to istnieje krytyczna wartość opóźnienia, dla której ma miejsce bifurkacja Hopfa i pojawiają się rozwiązania...
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Hopf bifurcation in time‐delayed gene expression model with dimers
PublicationWe study a mathematical model of gene transcription and protein synthesis with negative feedback. We consider a system of equations taking into account the formation of dimers (i.e., complex formed by two protein monomers), the way in which dimers bind to DNA and time delay in translation process. For the model consisting of three ordinary differential equations with time delay, we derive conditions for stability of the positive...
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When migrant men become more involved in household and childcare duties – the case of Polish migrants in Norway
Open Research DataIn our two studies, we focus on egalitarian attitudes towards genderrelations manifested by the readiness to share and actual share ofhousehold duties by Polish migrant couples in Norway, where wecompare their household arrangements with Polish couples inPoland to verify whether the migration to socio-democraticwelfare state country might encourage...
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A Proposal for Using Modified Site-specific Recombination Systems for Making Insertions into a Chosen Chromosomal Sitein vivoBased on the Analysis of I Phage Integration
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Synthesis of oxathiolone fused chalkones bearing O-aminoalkyl side chain. Comparison of stability of isomeric benzoxathiolones under alkylation reaction conditions
PublicationIzomeryczne oksatiolonowe sprzężone chalkony zawierające O-alkilowe łańcuchy boczne otrzymano w wyniku kondensacji odpowiednich benzoksatiolonów z podstawionymi benzaldehydami. Wyjściowe benzoksatiolony otrzymano w wyniku alkilowania odpowiednich fenoli chlorkami aninoalkilowymi, jednakże reakcja była często komplikowana w wyniku otwarcia pierścienia oksatiolonowego poprzez grupę aminową. Określono aktywność cytotoksyczną i przeciwdrobnoustrojową...
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Influence of Ni ion site occupancy on laser induced third harmonic generation (THG) studies in Li2SO4–MgO–P2O5 amorphous system
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Modification of quaternary structure of Candida albicans GlcN-6-P synthase and its desensitization to inhibition by UDP-GlcNAc by site-directed mutagenesis
PublicationSite-directed mutagenesis of the CaGFA1 gene encoding glucosamine-6-phosphate synthase from Candida albicans was performed. Desensitization of the enzyme to inhibition by UDPGlcNAc was achieved upon T487I and H492F substitutions at the UDP-GlcNAc binding site, exchange of D524, S525 and S527 for Ala at the dimer:dimer interface and construction of the tail-lock array (L434R and L460A) at the C-tail region. The first two sets if...
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Mechanical and thermo-mechanical properties of natural rubber composites filled with submicron- and nano-sized silica particles and prepared using glycolysate as a plasticizer
PublicationThe main aim of this work was to examine the selected mechanical and thermo-mechanical properties of natural rubber/silica composites prepared using glycolysate as a plasticizer. Prepared composites contained different amounts of submicron- (10, 15, 20 or 25 pphr) or nano-particles (0.5, 0.75, 1.0 or 1.25 pphr). The tensile properties, tear resistance, hardness, abrasion resistance and resilience of prepared materials were determined....
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Investigation of the Dynamism of Nanosized SOA Particle Formation in Indoor Air by a Scanning Mobility Particle Sizer and Proton-Transfer-Reaction Mass Spectrometry
PublicationTerpenes are VOCs of particular importance, since they are emitted from a wide range of indoor sources and are considered to be precursors of Secondary Organic Aerosol (SOA) formation. It has been proven that SOA particles, especially nanosized ones, pose a threat to human health. In this research, experiments with the application of an environmental chamber and real-time measurement techniques were carried out to investigate in...
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Adolfo Poma
PeopleI am the group leader of the computational modelling of biomolecules divison at the institute of Fundamental Technological Research Polish Academy of Sciences in Poland. My group was hosted between 2021-2022 by International Centre for Research on Innovative Bio-based Materials (ICRI-BioM). In 2008, I got a Master degree in computational physics from the State University of Campinas, Brazil. Then I moved to Germany and under the...
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TRNA-Leu (UUR) gene haplotypes observed in canine mammary gland tumours and its deleterious effect assessment according to the comparative analysis with TRNL1 human gene
Open Research DataThe aetiology and pathogenesis of many canine tumours are likely to be similar to cancers found in humans. This study aimed to present a plausible link between changes in tRNA-Leu (UUR) gene and the carcinogenesis process in dogs with mammary gland tumours. The whole mitochondrial DNA (mtDNA) isolated from blood and tumour tissues of 13 dogs with malig-nant...
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Do not die, become senescent: a new type of cellular resistance induced by topoisomerase II inhibitors in tumor cells with functional p53
PublicationJednym z efektów wywoływanych przez związki przeciwnowotworowe w komórkach nowotworowych jest trwałe zahamowanie wzrostu, związane z pojawieniem się markerów procesu starzenia komórkowego. Proponuje się, że może to być nowy sposób na zahamowanie postępu choroby nowotworowej. W naszych badaniach wykazujemy, że zahamowanie wzrostu indukowane przez związki z grupy inhibitorów topoizomerazy II w komórkach raka płuc A549 jest związane...
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The New Klebsiella pneumoniae ST152 Variants with Hypermucoviscous Phenotype Isolated from Renal Transplant Recipients with Asymptomatic Bacteriuria-Genetic Characteristics by WGS.
PublicationKlebsiella pneumoniae (Kp) is one of the most important etiological factors of urinary tract infections in renal transplant (RTx) recipients. We described the antimicrobial susceptibility phenotypes and genomic features of two hypermucoviscous (HM) Kp isolates recovered from RTx recipients with asymptomatic bacteriuria (ABU). Using whole genome sequencing (WGS) data, we showed that the strains belong to the ST152 lineage with the...
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In uence of Low-Level Features Extracted from Rhythmic and Harmonic Sections on Music Genre Classi cation
PublicationWe present a comprehensive evaluation of the infuence of 'harmonic' and rhythmic sections contained in an audio file on automatic music genre classi cation. The study is performed using the ISMIS database composed of music files, which are represented by vectors of acoustic parameters describing low-level music features. Non-negative Matrix Factorization serves for blind separation of instrument components. Rhythmic components...
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Knowledge management in SMEs – selected issues.
PublicationThe success of a small or medium-size enterprise might be dependent on the way in which this company manages its knowledge. With limited access to other resources like land, capital or labor force, the access to knowledge and its effective application might become a source of competitive advantage for an SME. It is confirmed that organizations, which successfully implement the concept of knowledge management might achieve better...
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Signatures of post-zygotic structural genetic aberrations in the cells of histologically normal breast tissue that can predispose to sporadic breast cancer
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CRITICAL REVIEWS IN EUKARYOTIC GENE EXPRESSION
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Human Gene Therapy Clinical Development
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Journal of Genetic Syndromes & Gene Therapy
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Recent Advances in DNA and Gene Sequences
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Magnetic flux leakage signals of near side defects measured with different velocities
Open Research DataThe dataset contains raw signals measured with the use of the magnetic flux leakage (MFL) technique. Linear Hall effect sensors A1324 were used to measure magnetic flux leakage. Three voltage signals were measured: Bx sensor output, Bz1 sensor output, and difference of Bz1 and Bz2 outputs. An output of a Bx sensor was directly proportional to the tangential...
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Maximum forces in tendon connections for an anchor with pin in the single-side sample experiment
Open Research DataThe main objective of the all study was to assess the load capacity of a new implant device for knotless tendon anastomosis. During this series of experiments the load capacity of the anchoring element with a pin (see figure 1) was examined. Tendons from fresh swine legs (commercially available) served as the biological material. All samples were subjected...
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Maximum forces in tendon connections for the Kessler suture in the single-side sample experiment
Open Research DataThe main objective of the all study was to assess the load capacity of a new implant device for knotless tendon anastomosis. During this series of experiments the load capacity of the traditional two-strand Kessler sutures (3-0 sutures) was examined. Tendons from fresh swine legs (commercially available) served as the biological material. All samples...
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Magnetic flux leakage signals of far side defects measured with different velocities
Open Research DataThe dataset contains raw signals measured with the use of the magnetic flux leakage (MFL) technique. Linear Hall effect sensors A1324 were used to measure magnetic flux leakage. Three voltage signals were measured: Bx sensor output, Bz1 sensor output, and difference of Bz1 and Bz2 outputs. An output of a Bx sensor was directly proportional to the tangential...
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Podejścia i strategie zarządzania wiedzą w przedsiębiorstwach
PublicationArtykuł przedstawia przegląd różnego rodzaju strategii zarządzania wiedzą.Jak powszechnie wiadomo, charakterystyka firmy (np. jej wielkość) wpływa na tworzoną i realizowaną w danym przedsiębiorstwie strategię. Należy więc założyć, że charakterystyka ta będzie również wpływała na wybór strategii zarządzania wiedzą, która będzie realizowana w danej firmie. Inne podejście do strategii zarządzania wiedzą będzie potrzebne w małej czy...