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Wyniki wyszukiwania dla: coarse graining
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Comparison of pathological staging and grading of urothelial bladder carcinoma in post-transurethral resection and post-radical cystectomy specimens
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Opto-Electrochemical Sensing Device Based on Long-Period Grating Coated with Boron-Doped Diamond Thin Film
PublikacjaThe fabrication process of thin boron-doped nanocrystalline diamond (B-NCD) microelectrodes on fused silica single mode optical fiber cladding has been investigated. The B-NCD films were deposited on the fibers using Microwave Plasma Assisted Chemical Vapor Deposition (MW PA CVD) at glass substrate temperature of 475 ºC. We have obtained homogenous, continuous and polycrystalline surface morphology with high sp3 content in B-NCD...
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Combining the MARTINI and Structure-Based Coarse-Grained Approaches for the Molecular Dynamics Studies of Conformational Transitions in Proteins
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Scale-consistent approach to the derivation of coarse-grained force fields for simulating structure, dynamics, and thermodynamics of biopolymers
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UNRES-Dock—protein–protein and peptide–protein docking by coarse-grained replica-exchange MD simulations
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UNRES-GPU for Physics-Based Coarse-Grained Simulations of Protein Systems at Biological Time- and Size-Scales
PublikacjaThe dynamics of the virus like particles (VLPs) corresponding to the GII.4 Houston, GII.2 SMV, and GI.1 Norwalk strains of human noroviruses (HuNoV) that cause gastroenteritis was investigated by means of long-time (about 30 μs in the laboratory timescale) molecular dynamics simulations with the coarse-grained UNRES force field. The main motion of VLP units turned out to be the bending at the junction between the P1 subdomain (that...
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Assessment of fatigue life of aluminized, coarse-grained MAR247 alloy supported by full-field ESPI measurements
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Lead-stress induced changes in the content of free, thylakoid- and chromatin-bound polyamines, photosynthetic parameters and ultrastructure in greening barley leaves
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Course of fatigue among patients previously hospitalised due to COVID-19
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Confirmation Bias in the Course of Instructed Reinforcement Learning in Schizophrenia-Spectrum Disorders
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Atypical course of varicella-zoster infection in a child with acute lymphoblastic leukaemia
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The Course and the Effects of Agricultural Biomass Pyrolysis in the Production of High-Calorific Biochar
PublikacjaThe thermal pyrolysis of agriculture biomass has been studied in a fixed-bed reactor, wherethe pyrolysis was conducted at a steady temperature of 800◦C. This work analyses the pyrolysisproducts of six agricultural wastes: pistachio husks, walnut husks, sunflower hulls, buckwheat husks,corncobs and coconut shells. The conducted research compared examples of large waste biomassstreams from different parts of the world as a potential...
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Relative product diversification in the course of economic development: import-export analysis.
PublikacjaThis paper contributes to trade diversification literature by comparing changes in relative (i.e. assessed in comparison with world patterns) heterogeneity of import and export structures in the process of economic development. In particular, by focusing on the diversification of imports, we add a missing piece to already analysed export trends. We use highly disaggregated trade statistics (4963 product lines) for 163 countries...
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Noise measurements on low noise pavements - problems with inhomogeneity of wearing course
PublikacjaDuring the last several years, when performing numerous CPX noise measurements on low noise pavements,significant inhomogeneity of the wearing course was observed in numerous cases. Similar problems were almost not existing regarding to the dense pavements.In general three main reasons of inhomogeneity can be defined. The first one are imperfections in technology of production of a asphalt mix or/and errors made already during...
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Coarse-grained model of the native cellulose $$\hbox {I}\alpha$$ and the transformation pathways to the $$\hbox {I}\beta$$ allomorph
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Mechanical and thermodynamic properties of Aβ42, Aβ40, and α-synuclein fibrils: a coarse-grained method to complement experimental studies
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Extension of the Force Matching Method to Anisotropic Coarse-Grained Transferable Force Fields: Application to the Unres Model of Proteins
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Extension of the Unres Package for Physics-Based Coarse-Grained Simulations of Proteins and Protein Complexes to Very Large Systems
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Modification and Optimization of the United-Residue (UNRES) Potential Energy Function for Canonical Simulations. I. Temperature Dependence of the Effective Energy Function and Tests of the Optimization Method with Single Training Proteins
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Equivariant Morse equation
PublikacjaThe paper is concerned with the Morse equation for flows in a representation of a compact Lie group. As a consequence of this equation we give a relationship between the equivariant Conley index of an isolated invariant set of the flow given by x˙ = − ∇f(x) and the gradient equivariant degree of ∇f. Some multiplicity results are also presented.
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Charge Transport in High-Entropy Oxides
PublikacjaThis work presents the results of research on the transport properties of the high-entropy BaZr1/8Hf1/8Sn1/8Ti1/8Y1/8In1/8Sm1/8Yb1/8O3–x perovskite oxide with special focus on proton transport. The presented study is part of broader work in which we focus on multiple different chemical compositions with the cation number varying from 5 up to 12 (in B-sublattice). The presence of proton defects is analyzed with thermogravimetry,...
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Supercapacitors - charge redistribution and restoring voltage
PublikacjaThe charge in supercapacitor is stored on electrodes and in electrolyte. The charges on electrodes create the Helmholtz double layer which is formed immediately with time constant of the order of seconds, while the charge storage in electrolyte is going on with time constant of the order of hundreds seconds. When the charged supercapacitor is shorted for few seconds, the charge from electrodes is discharged while the charge in...
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Generation of charge carriers pairs in tetracene.
PublikacjaBadano mechanizmy odpowiedzialne za fotogenerację nośników ładunku w polikrystalicznych warstwach tetracenu.
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Combined Long-Period Fiber Grating and Microcavity In-Line Mach–Zehnder Interferometer for Refractive Index Measurements with Limited Cross-Sensitivity
PublikacjaThis work discusses sensing properties of a long-period grating (LPG) and microcavity in-line Mach–Zehnder interferometer (µIMZI) when both are induced in the same single-mode optical fiber. LPGs were either etched or nanocoated with aluminum oxide (Al2O3) to increase its refractive index (RI) sensitivity up to ≈2000 and 9000 nm/RIU, respectively. The µIMZI was machined using a femtosecond laser as a cylindrical cavity (d = 60...
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In Search for Answers: Light4Health Online Course of Health Research for Interior Lighting Design
PublikacjaThree years ago, when I wrote an article in arc called: Human Centric Lighting. The New X Factor? (arc no. 108 Feb/Mar 2019), my intention was to raise questions in relation to the new topic and to find solid, research-based answers in the years to come. Today, I am happy to report that the lighting community, with the Light4Health Online Course of Health Research for Interior Lighting Design, has a useful tool, and consortium...
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Comparison of Different Course Controllers of Biomimetic Underwater Vehicle with Two Tail Fins
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Effect of polyvalent bacterial lysate on the clinical course of pollen allergic rhinitis in children
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Does previous abdominal surgery affect the course and outcomes of laparoscopic bariatric surgery?
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Application of pH measurements for the following the course of biological treatment of wastewater and its control
PublikacjaZaprezentowano wyniki badań przeprowadzonych w skali laboratoryjnej w reaktorze imitującym działanie reaktora SBR. Oczyszczaniu poddano ścieki syntetyczne z dodatkiem glukozy. W trakcie oczyszczania ścieków monitorowano zmiany pH, redox, przewodności oraz stężenia azotu amonowego, azotanów i fosforanów. Stwierdzono korelację między pH i zmianami stężenia fosoranów oraz brak podobnej zależności dla związków azotowych.
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Selected problems of determining the course of railway routes by use of GPS network solution
PublikacjaW 2009 roku Politechnika Gdańska rozpoczęła prace nad wykorzystaniem ciągłych pomiarów pozycji systemów geodezji satelitarnej dla wyznaczania przebiegu trasy kolejowej z wykorzystaniem fazowych metod GPS opartych o serwis NAVGEO polskiej Aktywnej Sieci Geodezyjnej ASG-EUPOS. W celu eliminacji błędów przypadkowych wpływających na dokładność wyznaczenia trasy kolejowej w następnym roku zespół przeprowadził dwie kampanie pomiarowe...
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Ship course control system taking into account the steering gear dynamic properties
PublikacjaW artykule zostały przedstawione różne konfiguracje regulatorów nieliniowych do sterowania kursem statku. Zaprojektowane regulatory oparto na metodzie backstepping, regulatorze PD oraz sterowaniu ślizgowym. Algorytmy uwzględniają na etapie projektowania liniowe własności dynamiczne urządzenia wykonawczo - sterującego maszyny sterowej. Dokonano analizy porównawczej jakości pracy rozpatrywanych struktur sterowania podczas badań symulacyjnych...
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Metrisable assessment of the course of stream‑systemic processes in vector form in industry 4.0
PublikacjaThe goal of this paper is to present an innovative conception how to use metrisable vector structure of a manufacturing process, based on quantitative relations between the activity of input streams, features of the product, and effect of losses; all of which are excellent practical solution for Industry 4.0, and in turn intelligent factories. This solution can be a usefull way in the process of building sustainable organization....
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Sailing Vessel Routing Considering Safety Zone and Penalty Time for Altering Course
PublikacjaIn this paper we introduce new model for simulation sea vessel routing. Besides a vessel types (polar diagram) and weather forecast, travel security and the number of maneuvers are considered. Based on these data both the minimal travelling costs and the minimal processing time are found for different vessels and different routes. To test our model the applications SailingAssistance wad improved. The obtained results shows that...
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Heavy metals partition between leachate and soilds the course of municipal sewage treatment.
PublikacjaAnalizowano zawarotści metali ciężkich w cieczy nadosadowej i zawiesinie w ściekach oraz osadach ściekowych po stabilizacji oraz odwadnianiu.Badania prowadzono w miejskiej oczyszczalni ścieków ''Wschód'' w Gdańsku.
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Wpływ degradacji urządzeń pomiarowych na pozyskiwanie symptomów niesprawnej pracy złożonych obiektów energetycznych [Influence of measuring equipment degradation on gaining of symptoms of large power units inefficient operation]
PublikacjaOpisywana jest możliwość budowania relacji cieplno-przepływowych diagnostycznych z zastosowaniem metody sztucznych sieci neuronowych. Są one zastosowane do detekcji zdegradowanych urządzeń pomiarowych w złożonych systemach pomiarowych. Przedstawiono to na przykładzie bloku energetycznego dużej mocy. Wykorzystano obliczenia symulacyjne degradacji. Rozważano zarówno degradacje samego systemu pomiarowego jak i degradacje geometrii...
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Ergodicity and model quality in template-restrained canonical and temperature/Hamiltonian replica exchange coarse-grained molecular dynamics simulations of proteins
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Potential use of granite waste sourced from rock processing for the application as coarse aggregate in high-performance self-compacting concrete
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The significance of institutions' potential to increase Youth civic participation – case study of the South Baltic Youth Core Groups Network Project
PublikacjaYoung people are a very important group of modern societies, they will replace the currently ruling generation and will shape our common future. Due to that, young people have become the relevant target of national and international policy and science researches. Youth civic participation is a key aspect of the development of a society and should be shaped by effective youth policy at the national and international levels. This...
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Incidence and Clinical Course of Respiratory Viral Coinfections in Children Aged 0–59 Months
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Mesophilic and thermophilic dark fermentation course analysis using sensor matrices and chromatographic techniques
PublikacjaProduction of biofuels from biomass is expected to benefit the society and the environment. At present, bio waste residues processing includes hydrolysis, dark fermentation, photofermentation, pyrolysis, gasification, and chemical synthesis. As the composition and the chemical structure of organic substances affect the efficiency of mentioned processes, it is believed that the glucose concentration is a crucial parameter for the...
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Individual entrepreneurial orientation: comparison of business and STEM students
PublikacjaAbstract Purpose – The purpose of this study is to determine whether there are differences in Individual Entrepreneurial Orientation (IEO) between students who are doing their major in business studies and the ones whose areas of study are science, technology, engineering, and mathematics (STEM). Design/methodology/approach – The current research investigates which factors and components contribute to EO orientation development...
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Trust case - a case for trustworthiness of IT infrastructures
PublikacjaArtykuł prezentuje podejście do budowy argumentów (trust case) uzasadniających zaufanie do systemów i infrastruktur IT. Wprowadza system pojęć związanych ze strukturą i treścią trust case, identyfikuje udziałowców trust case oraz dyskutuje możliwość wsparcia narzędziowego procesu zarządzanie trust case. Omawia równiez krótko dotychczasowe zastosowania tego podejścia.
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Prediction of coking dynamics for wet coal charge
PublikacjaA one-dimensional transient mathematical model describing thermal and flow phenomena during coal coking in an oven chamber was studied in the paper. It also accounts for heat conduction in the ceramic oven wall when assuming a constant temperature at the heating channel side. The model was solved numerically using partly implicit methods for gas flow and heat transfer problems. The histories of temperature, gas evolution and internal...
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Poroelastic Material for Urban Roads Wearing Courses
PublikacjaConventional road materials used for producing wearing courses of roads are based on mineral aggregate and bituminous or Portland cement binders. The road materials must be optimized for different properties, including skid resistance, durability, rolling resistance and tire/road noise. Unfortunately, it seems that within classic technologies it is very difficult to achieve further reduction of tire/road noise. Innovative porous...
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Poroelastic Material for Urban Roads Wearing Courses
PublikacjaConventional road materials used for producing wearing courses of roads are based on mineral aggregate and bituminous or Portland cement binders. The road materials must be optimized for different properties, including skid resistance, durability, rolling resistance and tire/road noise. Unfortunately, it seems that within classic technologies it is very difficult to achieve further reduction of tire/road noise. Innovative porous...
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Clarke duality for Hamiltonian systems with nonstandard growth
PublikacjaWe consider the existence of periodic solutions to Hamiltonian systems with growth conditions involving G-function. We introduce the notion of symplectic G-function and provide relation for the growth of Hamiltonian in terms of certain constant CG associated to symplectic G-function G. We discuss an optimality of this constant for some special cases. We also provide applications to the Φ-laplacian type systems.
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Photogeneration of charge carriers pairs in pentacene layers.
PublikacjaAnalizowano mechanizmy odpowiedzialne za powstawanie par nośników ładunku w polikrystalicznych warstwach pentacenu.
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Supporting compliance with safety standards by trust case templates
PublikacjaStandard Compliance (SC) Framework presented in this paper encompasses methods and tools which provide support for application of standards. The framework is based on trust case methodology. A trust case is a data structure which represents a justification that an object (a system, an infrastructure, an organization) exhibits certain properties. It contains an argument and related evidence which support claimed properties. A trust...
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Design of OFDM-based radio communication systems for coast-to-sea and coast-to-air propagation environments
PublikacjaIn the paper the study of radio communication system design process for systems based on OFDM transmission is considered. The signal propagation model for 1.4 GHz frequency band is discussed, and the study of signal propagation characteristics, important from the point of view of OFDM system design, is presented. The methodology of OFDM interface design is proposed and some characteristics of the OFDM-based radio communication...
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Prediction of protein structure with the coarse-grained UNRES force field assisted by small X-ray scattering data and knowledge-based information
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