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Search results for: cuda · unified memory · prefetching · memory oversubscription
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A Solution to Image Processing with Parallel MPI I/O and Distributed NVRAM Cache
PublicationThe paper presents a new approach to parallel image processing using byte addressable, non-volatile memory (NVRAM). We show that our custom built MPI I/O implementation of selected functions that use a distributed cache that incorporates NVRAMs located in cluster nodes can be used for efficient processing of large images. We demonstrate performance benefits of such a solution compared to a traditional implementation without NVRAM...
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Parallel implementation of a Sailing Assistance Application in a Cloud Environment
PublicationSailboat weather routing is a highly complex problem in terms of both the computational time and memory. The reason for this is a large search resulting in a multitude of possible routes and a variety of user preferences. Analysing all possible routes is only feasible for small sailing regions, low-resolution maps, or sailboat movements on a grid. Therefore, various heuristic approaches are often applied, which can find solutions...
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Survey of Methodologies, Approaches, and Challenges in Parallel Programming Using High-Performance Computing Systems
PublicationThis paper provides a review of contemporary methodologies and APIs for parallel programming, with representative technologies selected in terms of target system type (shared memory, distributed, and hybrid), communication patterns (one-sided and two-sided), and programming abstraction level. We analyze representatives in terms of many aspects including programming model, languages, supported platforms, license, optimization goals,...
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Improving Clairvoyant: reduction algorithm resilient to imbalanced process arrival patterns
PublicationThe Clairvoyant algorithm proposed in “A novel MPI reduction algorithm resilient to imbalances in process arrival times” was analyzed, commented and improved. The comments concern handling certain edge cases in the original pseudocode and description, i.e., adding another state of a process, improved cache friendliness more precise complexity estimations and some other issues improving the robustness of the algorithm implementation....
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An Improved Convolutional Neural Network for Steganalysis in the Scenario of Reuse of the Stego-Key
PublicationThe topic of this paper is the use of deep learning techniques, more specifically convolutional neural networks, for steganalysis of digital images. The steganalysis scenario of the repeated use of the stego-key is considered. Firstly, a study of the influence of the depth and width of the convolution layers on the effectiveness of classification was conducted. Next, a study on the influence of depth and width of fully connected...
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Dynamical description of quantum computing: generic nonlocality of quantumnoise
PublicationWe develop a dynamical non-Markovian description of quantum computing in the weak-coupling limit, in the lowest-order approximation. We show that the long-range memory of the quantum reservoir (such as the 1/t4 one exhibited by electromagnetic vacuum) produces a strong interrelation between the structure of noise and the quantum algorithm, implying nonlocal attacks of noise. This shows that the implicit assumption of quantum error...
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Crank–Nicolson FDTD Method in Media Described by Time-Fractional Constitutive Relations
PublicationIn this contribution, we present the Crank-Nicolson finite-difference time-domain (CN-FDTD) method, implemented for simulations of wave propagation in media described by time-fractional (TF) constitutive relations. That is, the considered constitutive relations involve fractional-order (FO) derivatives based on the Grünwald-Letnikov definition, allowing for description of hereditary properties and memory effects of media and processes....
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Parallel multithread computing for spectroscopic analysis in optical coherence tomography
PublicationSpectroscopic Optical Coherence Tomography (SOCT) is an extension of Optical Coherence Tomography (OCT). It allows gathering spectroscopic information from individual scattering points inside the sample. It is based on time-frequency analysis of interferometric signals. Such analysis requires calculating hundreds of Fourier transforms while performing a single A-scan. Additionally, further processing of acquired spectroscopic information...
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A New Type of Macro-Elements for Efficient Two-Dimensional FEM Analysis
PublicationThis letter deals with a model order reduction technique applicable for driven and eigenvalue problems solved using the finite element method (FEM). It allows one to efficiently compute electromagnetic parameters of structures comprising small features that require strong local mesh refinement. The subdomains of very fine mesh are separated from the global domain as so called macro-elements that undergo model reduction. The macro-elements...
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Client-server Approach in the Navigation System for the Blind
PublicationThe article presents the client‐server approach in the navigation system for the blind ‐ “Voice Maps”. The authors were among the main creators of the prototype and currently the commercialization phase is being finished. In the implemented prototype only exemplary, limited spatial data were used, therefore they could be stored and analysed (for path-finding process) in the mobile device’s memory without any difficulties. The...
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THE PANTOGRAPH AND ITS GEOMETRIC TRANSFORMATIONS - A FORMER POPULAR TOOL FOR COPYING AND SCALING
PublicationDevelopment of digital technology has resulted in significant transformations of designer workshops. Computer applications replaced the previously existing tools and methods for drawing up of projects. Professional, sophisticated drawing instruments and tools for manual plotting, as well as basic drawing aids, have gradually fallen into oblivion and become relicts of a bygone era - the objects of collectors' interest. Gdansk University...
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Chemical modifications of graphene and their influence on properties of polyurethane composites: a review
PublicationPolyurethane composites are materials of great interest nowadays due to their wide range of available forms and applications in industry. Controlling and achieving unique properties via matrix modifications and addition of various specific nanofillers seems be one of the key elements to success. The purpose of this work is to briefly present some examples of graphene nanoderivatives, their syntheses, properties and influence on...
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Performance Evaluation of Selected Parallel Object Detection and Tracking Algorithms on an Embedded GPU Platform
PublicationPerformance evaluation of selected complex video processing algorithms, implemented on a parallel, embedded GPU platform Tegra X1, is presented. Three algorithms were chosen for evaluation: a GMM-based object detection algorithm, a particle filter tracking algorithm and an optical flow based algorithm devoted to people counting in a crowd flow. The choice of these algorithms was based on their computational complexity and parallel...
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Using Redis supported by NVRAM in HPC applications
PublicationNowadays, the efficiency of storage systems is a bottleneck in many modern HPC clusters. High performance in the traditional approach – processing using files – is often difficult to obtain because of a model’s complexity and its read/write patterns. An alternative approach is to apply a key-value database, which usually has low latency and scales well. On the other hand, many key-value stores suffer from a limitation of memory...
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Blood Pressure Estimation Based on Blood Flow, ECG and Respiratory Signals Using Recurrent Neural Networks
PublicationThe estimation of systolic and diastolic blood pressure using artificial neural network is considered in the paper. The blood pressure values are estimated using pulse arrival time, and additionally RR intervals of ECG signal together with respiration signal. A single layer recurrent neural network with hyperbolic tangent activation function was used. The average blood pressure estimation error for the data obtained from 21 subjects...
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Decontaminating Arbitrary Graphs by Mobile Agents: a Survey
PublicationA team of mobile agents starting from homebases need to visit and clean all nodes of the network. The goal is to find a strategy, which would be optimal in the sense of the number of needed entities, the number of moves performed by them or the completion time of the strategy. Currently, the field of distributed graph searching by a team of mobile agents is rapidly expanding and many new approaches and models are being presented...
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Architektura pomników poświęconych ofiarom ataków terrorystycznych jako kontynuacja realizacji komemoratywnych kształtowanych w postpamięci
Publicationarchitecture of Memorials Dedicated to the Victims of terrorist attacks as a continuation of commemorative Structures created within Post-memory Having the rich art of commemorating events of the Second World War as a key reference, this article will try to show how contemporary architectural interven- tions in public space make attempts to respond to the social need of dealing with traumatic events and formulating a new attitude...
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A nontargeted approach to determine the authenticity of Ginkgo biloba L. plant materials and dried leaf extracts by liquid chromatography-high-resolution mass spectrometry (LC-HRMS) and chemometrics
PublicationThe lack of stringent regulations regarding raw materials for herbal supplements used for medicinal purposes has been a constant challenge in the industry. Ginkgo biloba L. leaf extracts attract consumers because of the supposed positive effect on mental performance and memory. Supplements are produced using dried leaf materials and standardized leaf extracts such as EGb 761. Adulteration of Ginkgo biloba L. plants and extracts...
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Magnetoelectric effect in (BiFeO3)x–(BaTiO3)1-x solid solutions
PublicationThe aim of the present work was to study magnetoelectric effect (ME) in (BiFeO3)x–(BaTiO3)1x solid solutions in terms of technological conditions applied in the samples fabrication process. The rapidly growing interest in these materials is caused by their multiferroic behaviour, i.e. coexistence of both electric and magnetic ordering. It creates possibility for many innovative applications, e.g. in steering the magnetic memory...
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CyberEye: New Eye-Tracking Interfaces for Assessment and Modulation of Cognitive Functions beyond the Brain
PublicationThe emergence of innovative neurotechnologies in global brain projects has accelerated research and clinical applications of BCIs beyond sensory and motor functions. Both invasive and noninvasive sensors are developed to interface with cognitive functions engaged in thinking, communication, or remembering. The detection of eye movements by a camera offers a particularly attractive external sensor for computer interfaces to monitor,...
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Performance assessment of OpenMP constructs and benchmarks using modern compilers and multi-core CPUs
PublicationConsidering ongoing developments of both modern CPUs, especially in the context of increasing numbers of cores, cache memory and architectures as well as compilers there is a constant need for benchmarking representative and frequently run workloads. The key metric is speed-up as the computational power of modern CPUs stems mainly from using multiple cores. In this paper, we show and discuss results from running codes such as:...
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Widespread theta synchrony and high-frequency desynchronization underlies enhanced cognition
PublicationThe idea that synchronous neural activity underlies cognition has driven an extensive body of research in human and animal neuroscience. Yet, insufficient data on intracranial electrical connectivity has precluded a direct test of this hypothesis in a whole-brain setting. Through the lens of memory encoding and retrieval processes, we construct whole-brain connectivity maps of fast gamma (30-100 Hz) and slow theta (3-8 Hz) spectral...
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A Workflow Application for Parallel Processing of Big Data from an Internet Portal
PublicationThe paper presents a workflow application for efficient parallel processing of data downloaded from an Internet portal. The workflow partitions input files into subdirectories which are further split for parallel processing by services installed on distinct computer nodes. This way, analysis of the first ready subdirectories can start fast and is handled by services implemented as parallel multithreaded applications using multiple...
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Checkpointing of Parallel MPI Applications using MPI One-sided API with Support for Byte-addressable Non-volatile RAM
PublicationThe increasing size of computational clusters results in an increasing probability of failures, which in turn requires application checkpointing in order to survive those failures. Traditional checkpointing requires data to be copied from application memory into persistent storage medium, which increases application execution time as it is usually done in a separate step. In this paper we propose to use emerging byte-addressable...
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Using FreeFEM open software for modelling the vibrations of piezoelectric devices
PublicationModelling vibrations of piezoelectric transducers has been a topic discussed in the literature for many decades. The first models - so-called one-dimensional - describe the vibrations only near operating frequency and near its harmonics. Attempts to introduce two-dimensional models were related to the possibility of one transducer working at several frequencies, including both thickness vibrations and those resulting from the transducer...
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BIOMEDICAL ENGINEERING EDUCATION IN POLAND - PIONEERS AND INSTITUTIONS
PublicationThe aim of this chapter is to show the history of biomedical engineering education in Poland, from the beginning till today with special task to underline the role of modern information technology. This story is not very old, just around one century, that may be classified into four basic periods related to important historic events. First are the beginnings before the second world war. Then post-war recovery and development of...
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Nowy algorytm rozszerzania bazy w arytmetyce resztowej
PublicationW artykule przedstawiono nowy algorytm rozszerzania bazy w resztowym systemie liczbowym bez użycia nadmiarowego modułu. Rozszerzanie bazy jest kluczową operacją w wielu zastosowaniach, gdzie używany jest resztowy system liczbowy, takich jak cyfrowe przetwarzanie sygnałów, jak też implementacja systemu szyfrowania algorytmem Rivesta-Shamira-Adlemana (RSA). Ortogonalne projekcje występujące w chińskim twierdzeniu o resztach, dla...
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ULEPSZONE SKALOWANIE W NIEREDUNDANCYJNEJ ARYTMETYCE RESZTOWEJ
PublicationPrzedstawiono nowy algorytm rozszerzania bazy w resztowym systemie liczbowym bez użycia nadmiarowego modułu. Rozszerzanie bazy jest kluczową operacją w wielu zastosowaniach, gdzie używany jest resztowy system liczbowy, takich jak cyfrowe przetwarzanie sygnałów, jak też implementacja systemu szyfrowania algorytmem Rivesta-Shamira-Adlemana (RSA). Ortogonalne projekcje występujące w chińskim twierdzeniu o resztach dla modułu, o który...
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Application of Binary Image Quality Assessment Methods to Predict the Quality of Optical Character Recognition Results
PublicationOne of the continuous challenges related to the growing popularity of mobile devices and embedded systems with limited memory and computational power is the development of relatively fast methods for real-time image and video analysis. One such example is Optical Character Recognition (OCR), which is usually too complex for such devices. Considering that images captured by cameras integrated into mobile devices may be acquired...
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Objective selection of minimum acceptable mesh refinement for EMC simulations
PublicationOptimization of computational electromagnetics (CEM) simulation models can be costly in both time and computing resources. Mesh refinement is a key parameter in determining the number of unknowns to be processed. In turn, this controls the time and memory required for a simulation. Hence, it is important to use only a mesh that is good enough for the objectives of the simulation, whether for direct handling of high-fidelity EM...
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Increasing K-Means Clustering Algorithm Effectivity for Using in Source Code Plagiarism Detection
PublicationThe problem of plagiarism is becoming increasingly more significant with the growth of Internet technologies and the availability of information resources. Many tools have been successfully developed to detect plagiarisms in textual documents, but the situation is more complicated in the field of plagiarism of source codes, where the problem is equally serious. At present, there are no complex tools available to detect plagiarism...
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Performance Analysis of the OpenCL Environment on Mobile Platforms
PublicationToday’s smartphones have more and more features that so far were only assigned to personal computers. Every year these devices are composed of better and more efficient components. Everything indicates that modern smartphones are replacing ordinary computers in various activities. High computing power is required for tasks such as image processing, speech recognition and object detection. This paper analyses the performance of...
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Compact global association based adaptive routing framework for personnel behavior understanding
PublicationPersonnel behavior understanding under complex scenarios is a challenging task for computer vision. This paper proposes a novel Compact model, which we refer to as CGARPN that incorporates with Global Association relevance and Adaptive Routing Pose estimation Network. Our framework firstly introduces CGAN backbone to facilitate the feature representation by compressing the kernel parameter space compared with typical algorithms,...
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Investigation of Performance and Configuration of a Selected IoT System—Middleware Deployment Benchmarking and Recommendations
PublicationNowadays Internet of Things is gaining more and more focus all over the world. As a concept it gives many opportunities for applications for society and it is expected that the number of software services deployed in this area will still grow fast. Especially important in this context are properties connected with deployment such as portability, scalability and balance between software requirements and hardware capabilities. In...
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Reactive extrusion of bio-based polymer blends and composites – Current trends and future developments
PublicationReactive extrusion is a cost-effective and environmentally-friendly method to produce new materials with enhanced performance properties. At present, reactive extrusion allows in-situ polymerization, modification/functionalization of polymers or chemical bonding of two (or more) immiscible phases, which can be carried out on commonly used extrusion lines. Although reactive extrusion has been known for many years, its application...
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A Parallel MPI I/O Solution Supported by Byte-addressable Non-volatile RAM Distributed Cache
PublicationWhile many scientific, large-scale applications are data-intensive, fast and efficient I/O operations have become of key importance for HPC environments. We propose an MPI I/O extension based on in-system distributed cache with data located in Non-volatile Random Access Memory (NVRAM) available in each cluster node. The presented architecture makes effective use of NVRAM properties such as persistence and byte-level access behind...
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Channel State Estimation in LTE-Based Heterogenous Networks Using Deep Learning
PublicationFollowing the continuous development of the information technology, the concept of dense urban networks has evolved as well. The powerful tools, like machine learning, break new ground in smart network and interface design. In this paper the concept of using deep learning for estimating the radio channel parameters of the LTE (Long Term Evolution) radio interface is presented. It was proved that the deep learning approach provides...
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Detection of Anomalies in the Operation of a Road Lighting System Based on Data from Smart Electricity Meters
PublicationSmart meters in road lighting systems create new opportunities for automatic diagnostics of undesirable phenomena such as lamp failures, schedule deviations, or energy theft from the power grid. Such a solution fits into the smart cities concept, where an adaptive lighting system creates new challenges with respect to the monitoring function. This article presents research results indicating the practical feasibility of real‐time...
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Neural Approximators for Variable-Order Fractional Calculus Operators (VO-FC)
PublicationThe paper presents research on the approximation of variable-order fractional operators by recurrent neural networks. The research focuses on two basic variable-order fractional operators, i.e., integrator and differentiator. The study includes variations of the order of each fractional operator. The recurrent neural network architecture based on GRU (Gated Recurrent Unit) cells functioned as a neural approximation for selected...
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Research on Linear Actuators for Active Foil Bearings
PublicationActive foil bearings are a kind of gas foil bearing. They contain actuators which allow for modification of the bearing sleeve size and the shape of the lubrication gap. Rotor vibrations can be actively controlled by these changes. It is possible, among other things, to reduce the starting torque, control the vibration amplitude at different speeds and improve operational safety. Prototypes of active foil bearings are being developed...
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Efficiency of Artificial Intelligence Methods for Hearing Loss Type Classification: an Evaluation
PublicationThe evaluation of hearing loss is primarily conducted by pure tone audiometry testing, which is often regarded as golden standard for assessing auditory function. If the presence of hearing loss is determined, it is possible to differentiate between three types of hearing loss: sensorineural, conductive, and mixed. This study presents a comprehensive comparison of a variety of AI classification models, performed on 4007 pure tone...
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Utilising AI Models to Analyse the Relationship between Battlefield Developments in the Russian-Ukrainian War and Fluctuations in Stock Market Values
PublicationThis study examines the impact of battlefield developments in the ongoing Russian–Ukrainian war, which to date has lasted over 1000 days, on the stock prices of defence corporations such as BAE Systems, Booz Allen Hamilton, Huntington Ingalls, and Rheinmetall AG. Stock prices were analysed alongside sentiment data extracted from news articles, and processed using machine learning models leveraging natural...
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Implementation of Time-Averaged Restraints with UNRES Coarse-Grained Model of Polypeptide Chains
PublicationTime-averaged restraints from nuclear magnetic resonance (NMR) measurements have been implemented in the UNRES coarse-grained model of polypeptide chains in order to develop a tool for data-assisted modeling of the conformational ensembles of multistate proteins, intrinsically disordered proteins (IDPs) and proteins with intrinsically disordered regions (IDRs), many of which are essential in cell biology. A numerically stable variant...
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Communication and Load Balancing Optimization for Finite Element Electromagnetic Simulations Using Multi-GPU Workstation
PublicationThis paper considers a method for accelerating finite-element simulations of electromagnetic problems on a workstation using graphics processing units (GPUs). The focus is on finite-element formulations using higher order elements and tetrahedral meshes that lead to sparse matrices too large to be dealt with on a typical workstation using direct methods. We discuss the problem of rapid matrix generation and assembly, as well as...
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Hierarchia czynników wpływu w diagnostyce komponentów stalowych metodą statycznego pola rozproszonego
PublicationWśród technik badań nieniszczących obiektów stalowych (NDT) szczególną rolę pełnią techniki elektromagnetyczne, jako relatywnie tanie, czyste, szybkie i adaptowalne. Mają one jednak istotne ograniczenia, o których wydają się zapominać praktycy promujący tzw. metodę magnetycznej pamięci metali (ang. magnetic metal memory, MMM). Szczególnie dyskusyjna jest postulowana przez nich możliwość ilościowej korelacji charakterystyk pola...
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Device-independent quantum key distribution based on measurement inputs
PublicationWe provide an analysis of a family of device-independent quantum key distribution (QKD) protocols that has the following features. (a) The bits used for the secret key do not come from the results of the measurements on an entangled state but from the choices of settings. (b) Instead of a single security parameter (a violation of some Bell inequality) a set of them is used to estimate the level of trust in the secrecy of the key....
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Experience-Based Cognition for Driving Behavioral Fingerprint Extraction
PublicationABSTRACT With the rapid progress of information technologies, cars have been made increasingly intelligent. This allows cars to act as cognitive agents, i.e., to acquire knowledge and understanding of the driving habits and behavioral characteristics of drivers (i.e., driving behavioral fingerprint) through experience. Such knowledge can be then reused to facilitate the interaction between a car and its driver, and to develop better and...
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ECHOES REDUCTION DURING DIGITAL DATA TRANSMISSION IN HYDROACOUSTIC CHANNEL – LABORATORY EXPERIMENT
PublicationThe possibility of using a hydroacoustic channel for digital data transmission is very limited. This is due to the effect of multipath propagation of the emitted acoustic wave and the damping of the mechanical wave in this medium, which increase with frequency. The first of these phenomena results in inter-symbol interference disturbances in data transmission systems, including even hundreds of symbols. Due to the number of reflections...
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Acceleration of the Discrete Green’s Function Formulation of the FDTD Method Based on Recurrence Schemes
PublicationIn this paper, we investigate an acceleration of the discrete Green's function (DGF) formulation of the FDTD method (DGF-FDTD) with the use of recurrence schemes. The DGF-FDTD method allows one to compute FDTD solutions as a convolution of the excitation with the DGF kernel. Hence, it does not require to execute a leapfrog time-stepping scheme in a whole computational domain for this purpose. Until recently, the DGF generation...
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Automated hearing loss type classification based on pure tone audiometry data
PublicationHearing problems are commonly diagnosed with the use of tonal audiometry, which measures a patient’s hearing threshold in both air and bone conduction at various frequencies. Results of audiometry tests, usually represented graphically in the form of an audiogram, need to be interpreted by a professional audiologist in order to determine the exact type of hearing loss and administer proper treatment. However, the small number of...