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Search results for: SPE
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Specific features of refractive, piezo-optic and nonlinear optical dispersions of β-LiNH4SO4 single crystals
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Defining a novel domain that provides an essential contribution to site-specific interaction of Rep protein with DNA
PublicationAn essential feature of replication initiation proteins is their ability to bind to DNA. In this work, we describe a new domain that contributes to a replication initiator sequence-specific interaction with DNA. Applying biochemical assays and structure prediction methods coupled with DNA–protein crosslinking, mass spectrometry, and construction and analysis of mutant proteins, we identified that the replication initiator of the...
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Unraveling the Interplay between DNA and Proteins: A Computational Exploration of Sequence and Structure-Specific Recognition Mechanisms
PublicationMy PhD dissertation focused on DNA-protein interactions and the recognition of specific DNA sequences and structures. I discovered that acidic amino acid residues (Asp/Glu) play a crucial role by exhibiting a preference for cytosine. Their contribution to binding affinity depends on nearby cytosines, balancing electrostatic repulsion with specific interactions. Acidic residues act as negative selectors, discouraging non-cytosine...
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The Specific Nature of Chemical Composition of Water from Volcanic Lakes Based on Bali Case Study
PublicationThe research area was localized in the Indonesian Archipelago, at the latitude of eight and nine degrees S on the one of the Lesser Sunda group island provinces, Bali (563,3 km2). Two massive calderas (Mount Batur 1717 m above sea level.; Mount Sangiyang 2093 m above sea level) are one of the most prominent landforms in the chain of volcanic mountain ranges of the Bali Island. Lake Batur (17,18 km2) and Batur Spring (which are...
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Concept of an Innovative System for Dimensioning and Predicting Changes in the Coastal Zone Topography Using UAVs and USVs (4DBatMap System)
PublicationThis publication is aimed at developing a concept of an innovative system for dimensioning and predicting changes in the coastal zone topography using Unmanned Aerial Vehicles (UAVs) and Unmanned Surface Vehicles (USVs). The 4DBatMap system will consist of four components: 1. Measurement data acquisition module. Bathymetric and photogrammetric measurements will be carried out with a specific frequency in the coastal zone using...
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Determination of hormones in water samples using liquid chromatography coupled with tandem mass spectrometry
PublicationOver the past few years, many synthetic (ethinylestradiol) and natural (estradiol,estriol, estrone) compounds present in the environment have been affecting the hormonalbalance of humans and animals. Steroid hormones are very often used for medical purposesand have high estrogenic activity what makes them endocrine disrupters. Most hormonalcompounds are released into the water as a result of their incomplete removal in wastewatertreatment...
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The elasto-plastic numerical study of crack initiation in notched PMMA specimens under uniaxial loading conditions – Tension and torsion
PublicationThis paper presents the results of FEM numerical calculations aimed at describing the plastic strain and stress fields under critical loading conditions: tensile force or torsional moment. The calculations were carried out with reference to the results of experimental tensile and torsional tests of flat PMMA specimens weakened with V-notches of different root radii: 0.5, 2 and 10 mm. The procedure for conducting nonlinear numerical...
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Fracture prediction in flat PMMA notched specimens under tension - effectiveness of the equivalent material concept and fictitious material concept
PublicationThe fracture of notched elements under mode I loading (tension) remains an inexhaustible research topic, especially when it comes to the fracture of thermoplastic materials such as polymethylmethacrylate (PMMA), which experience considerable plastic strains under tension. The paper points out that traditional brittle fracture criteria such as mean stress (MS) or maximum tangential stress (MTS) criteria used to predict this phenomenon do...
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INVESTIGATIONS OF QUASI-STATIC VORTEX-STRUCTURES IN 3D SAND SPECIMENS BASED ON DEM AND HELMHOLTZ-HODGE VECTOR FIELD DECOMPOSITION.
PublicationArtykuł omawia wyniki numeryczne dotyczące struktur wirowych w materiałach granulowanych w warunkach 3D. Obliczenia wykonano dla ściskania dwuosiowego. W symulacjach wykorzystano metodę elementów dyskretnych i dekompozycję pola wektorowego wg Helmholtza-Hodge’a Struktury wirowe okazały się znakomitym prekursorem lokalizacji odkształceń stycznych w materiałach granulowanych podczas obciążenia.
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Relationship between vortex structures and shear localization in 3D granular specimens based on combined DEM and Helmholtz-Hodge decomposition.
PublicationRelationship between vortex structures and shear localization in 3D granular specimens based on combined DEM and Helmholtz-Hodge decomposition. Granular Matter, doi:10.1007/s10035-018-0815-0, 2018.
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Spectral analysis of nonstationary low-frequency magnetic-field emissions from ship's power
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Numerical Estimate of the Spectral Resonance Structure Frequency Scale of Natural ULF Magnetic Field
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Spectral profiling of radicals in polymer degradation based on electron spin resonance imaging (ESRI)
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Certain numerical issues of wave propagation modelling in rods by the Spectral Finite Element Method
PublicationW pracy omówiony zagadnienia związane z modelowaniem propagacji fal sprężystych metodą Spektralnych Elementów Skończonych. Przedstawiono wpływ postaci macierzy mas na błędy rozwiązania. Omówiono zakres stosowalności modeli.
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Formulation of spectral truss element for guided waves damage detection in spatial steel trusses
PublicationW pracy przedstawiono sformułowanie wielowęzłowego elementu spektralnego oraz odpowiedniego schematu całkowania ukierunkowanego na problem propagacji fal w kratownicach przestrzennych o dowolnej geometrii. Zaproponowane podejście nie ogranicza liczby węzłów w elemencie kratowym. Porównawcze rozwiązania numeryczne przeprowadzono dla konstrukcji idealnej (w stanie nieuszkodzonym) oraz dlakonstrukcji z miejscową nieregularnością w...
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Electronic and nuclear properties from the analysis of the isotope shifts in the spectral lines of lead [online]
PublicationW pracy dokonano analizy 24 linii widmowych atomu i jonu ołowiu, przy użyciu metody diagramów Kinga. Połączenie danych pomiarowych otrzymanych z badań fizyki jądrowej z danymi spektroskopii optycznej pozwoliło na analizę przesunięć izotopowych linii widmowych niezależnie od modelu teoretycznego. W wyniku czego, rozdzielono efekt masy od efektu objętościowego i otrzymano szereg danych spektroskopowych stanowiących bogatą bazę doświadczalną...
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Modelling of wave propagation in composite plates using the time domain spectral element method
PublicationW pracy przedstawiono wyniki obliczeń propagacji fali sprężystej w płycie kompozytowej modelowanej z wykorzystaniem czasowego sformułowania metody elementów spektralnych
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Spectral Finite Element Method for Propagation of Elastic Waves in Wind Turbine Blades for SHM
PublicationW pracy przedstawiono model łopaty turbiny wiatrowej zbudowany z wykorzystaniem spektralnych elementów skończonych. Omówiono wyniki symulacji propagacji fal sprężystych i ich interakcji z uszkodzeniami w formie pęknięcia i delaminacji.
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Influence of Al3+co-doping on the spectral properties of europium doped Ca9Y(PO4)7
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Remarks on evaluation of spectral radius of operators arising in WR methods for linear systems of ODEs
PublicationW pracy omawiane są różne metody oszacowania promienia spektralnego. Do oszacowań tych użyto elementarnych metod. Jedną z nich jest metoda wykorzystująca normę Bieleckiego. Jedną z zalet takich metod wyraźnie widać na przykładzie równań różniczkowych z opóźnieniem, gdzie oszacowania promienia spektralnego zależą od charakteru opóźnienia.
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The Spectral Compositions of Light Changes Physiological Response of Chinese Cabbage to Elevated Ozone Concentration
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Current-based higher-order spectral covariance as a bearing diagnostic feature for induction motors
PublicationConducting the diagnosis of induction motors remotely by analyzing the supply current is an attractive prospect with the lack of access to the engine. Currently, there is no solution, based on analysis of the current, the credibility of which would allow its use in industry. The statistics of bearing failures in induction motors indicate that they constitute more than 40% of induction motor damage, therefore, bearing diagnosis...
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Novel approach to modeling spectral-domain optical coherence tomography with Monte Carlo method
PublicationNumerical modeling Optical Coherence Tomography (OCT) systems is needed for optical setup optimization, development of new signal processing methods and assessment of impact of different physical phenomena inside the sample on OCT signal. The Monte Carlo method has been often used for modeling Optical Coherence Tomography, as it is a well established tool for simulating light propagation in scattering media. However, in this method...
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Analysis of graphene multi-strip planar guiding structures with the use of spectral domain approach
PublicationSpectral domain approach is modified and used to analyze some simple structures containing graphene strips. The modification is simple and concerns the Green’s function only. Moreover, the method is combined with the recently published root finding algorithms, which significantly improve the efficiency of the analysis. The results obtained for a simple guiding structure is verified and the field displacement effect is confirmed.
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A Measurement System for Quasi-Spectral Determination of Absorption and Scattering Parameters of Veterinary Tissue Phantoms
PublicationThis paper describes the construction of a system for the quasi-spectral determination of absorption and scattering parameters of animal tissue phantoms. Several tissue phantoms, including one reference and two modified for examination, were prepared from polydimethylsiloxane (PDMS). The phantoms were measured using a system based on an integrating sphere and the light sources of wavelengths commonly used for the treatment of various...
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Analyzing the Impact of Simulated Multispectral Images on Water Classification Accuracy by Means of Spectral Characteristics
PublicationRemote sensing is widely applied in examining the parameters of the state and quality of water. Spectral characteristics of water are strictly connected with the dispersion of electromagnetic radiation by suspended matter and the absorp-tion of radiation by water and chlorophyll a and b.Multispectral sensor ALI has bands within the ranges of electromagnetic radia-tion: blue and infrared, absent in sensors such as Landsat, SPOT,...
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Novel Fault Identification for Electromechanical Systems via Spectral Technique and Electrical Data Processing
PublicationIt is proposed, developed, investigated, and validated by experiments and modelling for the first time in worldwide terms new data processing technologies, higher order spectral multiple correlation technologies for fault identification for electromechanical systems via electrical data processing. Investigation of the higher order spectral triple correlation technology via modelling has shown that the proposed data processing technology...
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Spectral criterion for high-cycle fatigue of metals under multiaxial static and stochastic loading.
PublicationPraca dotyczy oceny zmęczenia metali ciągliwych w złożonych stanach wieloosiowych obciążeń statycznych i dynamicznych, przy założeniu, że składowe naprężenia są stacjonarnymi procesami stochastycznymi, które są stacjonarnie skorelowane i różniczkowalne w sensie średniokwadratowym. Przyjmując, że wartości średnie i gęstości widmowe mocy tych procesów są znane, sformułowano kryterium ograniczonej trwałości zmęczeniowej w dziedzinie...
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Spectral criterion for high-cycle fatigue of anisotropic metals under multiaxial random loads
PublicationPraca dotyczy oceny ograniczonej trwałości zmęczeniowej metali ciągliwych, poddanych wieloosiowym obciążeniom statycznym i dynamicznym. Zakłada się, że kartezjańskie składowe tensora naprężenia są sumą losowych wartości średnich o znanych drugich momentach statystycznych i stacjonarnych procesów stochastycznych o znanych gęstościach widmowych mocy. Przyjmując, że procesy te są stacjonarnie skorelowane, różniczkowalne w sensie średnio-kwadratowym...
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Experimental insights into consolidation rates during one-dimensional loading with special reference to excess pore water pressure
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Efficiency of landfill leachate treatment in a MBR/UF system combined with NF, with a special focus on phthalates and bisphenol A removal
PublicationIn this study, a pilot-scale membrane bioreactor (MBR) was operated at a municipal solid waste plant (MSWP) to treat a mixture of landfill leachates (LLs) obtained from modern (MP-LLs) and previous (PP-LLs) waste cells. The MBR unit combined anoxic and aerobic zones with external ultra- and nanofiltration (MBR/UF and MBR/UF/NF, respectively). In addition to the removal of macropollutants, special attention was given to phthalates...
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Erratum to "Formulas and Theorems for the Special Functions of Mathematical Physics" by W. Magnus, F. Oberhettinger, R. P. Soni
PublicationWe correct a number of misprints in the handbook "Formulas and theorems for the special functions of mathematial physics" (3rd edition) by Magnus, Oberhettinger and Soni.
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Species differences in total mercury concentration in gulls from the Gulf of Gdansk (Southern Baltic)
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Multispecies invasion reduces the negative impact of single alien plant species on native flora
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Cuticle hydrolysis in four medically important fly species by enzymes of the entomopathogenic fungusConidiobolus coronatus
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Spectroscopic, thermal and equilibrium characterization of U(VI) ions sorption on inulin in the presence of phosphates
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Nested PCR for the detection of Aspergillus species in maxillary sinus samples of patients with chronic sinusitis
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Variable Temperature Spectroscopic Ellipsometry as a Tool for Insight into the Optical Order in the P3HT:PC70BM and PC70BM Layers
PublicationTwo combined ellipsometric techniques—variable angle spectroscopic ellipsometry (VASE) and variable temperature spectroscopic ellipsometry (VTSE)—were used as tools to study the surface order and dielectric properties of thin films of a poly(3-hexylthiophene-2,5-diyl) (P3HT) mixture with a fullerene derivative (6,6-phenyl-C71-butyric acid methyl ester) (PC70BM). Under the influence of annealing, a layer of the ordered PC70BM...
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Determination of pharmaceuticals in fish: method optimization and occurrence in different species from Mediterranean rivers
PublicationThe multi-residue analytical method developed, based on accelerated solvent extraction, gel permeation chromatography purification and UPLC-MS/MS analysis allowed the simultaneous determination of 21 pharmaceuticals. Recoveries obtained for most of the target compounds were higher than 50%. The application of UPLC-MS/MS operating in the MRM mode, with two transitions monitored for each compound, provided good sensitivity and selectivity....
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Spectroscopic Signature of Red Blood Cells in a D-Galactose-Induced Accelerated Aging Model
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Laboratory measurements of remote sensing reflectance of selected phytoplankton species from the Baltic Sea
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The influence of charge compensation defects on the spectroscopic properties of europium doped Ca9Y(PO4)7
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SURFACE AND SPECTROSCOPIC PROPERTIES OF 1,8-DIAZAFLUOREN-9-ONE IN TITANIUM DIOXIDE THIN FILMS
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Platelets in fetal growth restriction: role of reactive oxygen species, oxygen metabolism, and aggregation.
PublicationFetal growth restriction (FGR) is mainly caused by failure of the uteroplacental unit. Theexact pathogenesis remains unclear. The cause is thought to be related to abnormal platelet activation,which may...
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Biological activities of leaf extracts from selected Kalanchoe species and their relationship with bufadienolides content
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Single‐walled carbon nanotubes modified by PFO: An optical absorption and Raman spectroscopic investigation
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Mixed growth of Salix species can promote phosphate-solubilizing bacteria in the roots and rhizosphere
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Comparative Genomics of Stenotrophomonas maltophilia and Stenotrophomonas rhizophila Revealed Characteristic Features of Both Species
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Determination of anti-tyrosinase activity of acetone extracts from selected Potentilla L. species.
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Naphthyl-vs. anthrylpyridine-2,6-dicarboxamides in cation binding studies. Synthesis and spectroscopic properties
PublicationPyridine-2,6-carboxamides bearing - or -naphthyl- and - or -anthryl- residues were prepared using simple method from pyridine-2,6-carboxylic acid dichloride and the respective aromatic amines. For the obtained receptors selective binding of lead(II), and copper(II) was found. Ion-receptor interactions were studied using UV-vis spectroscopy, spectrofluorimetry, 1H NMR, and FTIR spectroscopy. The reversible lead(II) and copper(II)...