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Search results for: computer phylogenetics
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Semantic Integration of Heterogeneous Recognition Systems
PublicationComputer perception of real-life situations is performed using a variety of recognition techniques, including video-based computer vision, biometric systems, RFID devices and others. The proliferation of recognition modules enables development of complex systems by integration of existing components, analogously to the Service Oriented Architecture technology. In the paper, we propose a method that enables integration of information...
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Multi Queue Approach for Network Services Implemented for Multi Core CPUs
PublicationMultiple core processors have already became the dominant design for general purpose CPUs. Incarnations of this technology are present in solutions dedicated to such areas like computer graphics, signal processing and also computer networking. Since the key functionality of network core components is fast package servicing, multicore technology, due to multi tasking ability, seems useful to support packet processing. Dedicated...
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Analysis of aircraft magnetic interference
PublicationThe magnetometric method is used among other things on mobile platforms (planes, helicopters) in military systems and in geological research. Optically-pumped and SQUID magnetometers are used in magnetic systems on airplanes. To be able to attain the sensitivity of modern magnetometers in flight, it is important that maneuver-related magnetic interference effects be minimized. The mathematical model of an aircraft as a source of...
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Non-relational Databases 2022/2023
e-Learning CoursesThis course discusses the three types of non-relational databases (i.e. document, graph, key-value). The course is aimed at students in the 7th semester of computer science.
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Non-relational Databases 2023/2024
e-Learning CoursesThis course discusses the three types of non-relational databases (i.e. document, graph, key-value). The course is aimed at students in the 7th semester of computer science.
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Milena Marycz dr inż.
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Computer Aided Maintnance of the Stock of Machines -DaPE 2022/23
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Quadratic stochastic operators as a tool in modelling the dynamics of a distribution of a population trait
PublicationQuadratic stochastic operators can exhibit a wide variety of asymptotic behaviours and these have been introduced and studied recently. In the present work we discuss biological interpretations that can be attributed to them. We also propose a computer simulation method to illustrate the behaviour of iterates of quadratic stochastic operators.
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Podstawy uczenia głębokiego 2022
e-Learning Courses{mlang pl}Kurs podstaw uczenia głębokiego przeznaczony dla studentów kierunku Informatyka.{mlang} {mlang en}This is a course about deep learning basics dedicated for Computer Science students.{mlang}
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Defining a novel domain that provides an essential contribution to site-specific interaction of Rep protein with DNA
PublicationAn essential feature of replication initiation proteins is their ability to bind to DNA. In this work, we describe a new domain that contributes to a replication initiator sequence-specific interaction with DNA. Applying biochemical assays and structure prediction methods coupled with DNA–protein crosslinking, mass spectrometry, and construction and analysis of mutant proteins, we identified that the replication initiator of the...
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Escherichia coli Strains with Virulent Factors Typical for Uropathogens were Isolated from Sinuses from Patients with Chronic Rhinosinusitis—Case Report
PublicationEscherichia coli were isolated from three patients with chronic rhinosinusitis (CRS) by intraoperative sinus tissue biopsy. Taking into account the unusual replicative niche and previous treatment failures, it was decided to focus on the virulence and drug resistance of these bacteria. The strains turned out to be multi-sensitive, but the rich virulence factors profile of bacteria typical for phylogenetic group B2 deserved attention....
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Comparison of developed gaze point estimation methods
PublicationThis paper presents the software part of an inexpensive hands-free eye tracking system. The system works using infrared illumination like most of the available eye trackers. Two methods allowing estimation the gaze point on computer screen are compared. Research on effectiveness of these methods is discussed and the better one is indicated.
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Remote measurement of building usable floor area - Algorithms fusion
PublicationRapid changes that are taking place in the urban environment have significant impact on urban growth. Most cities and urban regions all over the world compete to increase resident and visitor satisfaction. The growing requirements and rapidity of introducing new technologies to all aspects of residents' lives force cities and urban regions to implement "smart cities" concepts in their activities. Real estate is one of the principal...
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Context of Use
PublicationRaport techniczny - opis metody ''Context of Use'' wykorzystywanej w projektowaniu komunikacji człowiek-komputer oraz doskonaleniu interfejsu użytkownika.
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Tomasz Maria Boiński dr inż.
PeopleI’m associated with the University since the year 2000 when I started my studies in Computer Science on the Faculty of Electronics, Telecommunications and Informatics. After graduating with honors in 2005, I applied for doctoral studies. During his studies and immediately afterward I was involved in cooperation with Hogart from Warsaw, in the implementation of business solutions in Gdynia company Elektronika SA (Infor FMS SunSystems)...
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Convergence to equilibrium under a random Hamiltonian
PublicationWe analyze equilibration times of subsystems of a larger system under a random total Hamiltonian, in which the basis of the Hamiltonian is drawn from the Haar measure. We obtain that the time of equilibration is of the order of the inverse of the arithmetic average of the Bohr frequencies. To compute the average over a random basis, we compute the inverse of a matrix of overlaps of operators which permute four systems. We first...
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Marc Janovic Bachelor of Science in Computer Science
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Analysis of ship's magnetic field with consideration of inner ferromagnetic devices
PublicationThis paper presents computer simulations of ship’s magnetic signatures. The influence of ship’s inner ferromagnetic devices on the signature was presented. The magnetic fields of the ship’s model were calculated in Opera 3D 18R2. The model was built from thin plates. The new, thin plate boundary condition was introduced on all ship’s surfaces.
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Recognition of Hand Drawn Flowcharts
PublicationIn this paper the problem of hand drawn flowcharts recognition is presented. There are described two attitudes to this problem: on-line and off-line. A concept of FCE, a system for recognizing and understanding of freehand drawn on-line flow charts on desktop computer and mobile devices is presented. The first experiments with the FCE system and the planes for future are also described.
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User satisfaction model
PublicationRaport techniczny - opis metody ''User Satisfaction Methods'' wykorzystywanej w projektowaniu komunikacji człowiek-komputer oraz doskonaleniu interfejsu użytkownika.
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Fuctional structure of diagnostic system for wheeled tractors
PublicationAn application of computer controlled fuel injection systems in vehicle engines and growing demands concerning toxic substances emission and fuel consumption was a main reason for OBD (On Board Diagnosis) development. In spite of a great technological development, only some tractors are equipped in diagnostic systems. On board diagnosis is strongly connected with emission demands and does not concern other important vehicle functions.In...
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Supporting development of the smart ship technology by CFD simulation of ship behavior in close to real operational conditions
PublicationThe shipping industry is at the milestone of technological development – autonomous ships. Involving smart technologies accelerates development of green and safe shipping. Also IMO regulations, especially EEDI en-hanced application of new technologies. Meeting economic and ecological requirements future ships need to be designed with respect to increased reliability and operational performance. Design process of ships may be improved...
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An application of simulation model of fuel consumption in diagnostic system of wheeled tractors
PublicationAn application of computer controlled fuel injection systems in vehicle engines and growing demands concerning toxic substances emission and fuel consumption was a main reason for OBD (On Board Diagnosis) development. In spite of a great technological development, only some tractors are equipped in diagnostic systems. On board diagnostic is strongly connected with emission demands and does not concern other important vehicle functions. In...
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Optimization of Data Assignment for Parallel Processing in a Hybrid Heterogeneous Environment Using Integer Linear Programming
PublicationIn the paper we investigate a practical approach to application of integer linear programming for optimization of data assignment to compute units in a multi-level heterogeneous environment with various compute devices, including CPUs, GPUs and Intel Xeon Phis. The model considers an application that processes a large number of data chunks in parallel on various compute units and takes into account computations, communication including...
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Video recordings of static hand gestures for gesture based interaction
Open Research DataThis data set contains video recording of selected simple hand gestures related to sign language. The purpose of the data set is to evaluate different computer algorithms design for hand gesture detection as well as for hand features and hand pose detection and identification. The data set contains 5 video recordings in mp4 format. Each recording is...
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Binary-Encounter Model for Direct Ionization of Molecules by Positron-Impact
PublicationWe introduce two models for the computation of direct ionization cross sections by positron impact over a wide range of collision energies. The models are based on the binary-encounter-Bethe model and take into account an extension of the Wannier theory. The cross sections computed with these models show good agreement with experimental data. The extensions improve the agreement between theory and experiment for collision energies...
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Joanna Szłapczyńska dr hab. inż.
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FDTD Simulations on Disjoint Domains with the Use of Discrete Green's Function Diakoptics
PublicationA discrete Green's function (DGF) approach to couple disjoint domains in the finite-difference time-domain (FDTD) grid is developed. In this method, total-field/scattered-field (TFSF) FDTD domains are associated with simulated objects whereas the interaction between them is modeled with the use of the DGF propagator. Hence, source and scatterer are simulated in separate domains and updating of vacuum cells, being of little interest,...
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Optimizing the process of railway geometrical layout designing with multi-criteria assessment method
PublicationThe paper presents the main assumptions of the Multi-criteria assessment method used in process of upgrading the railway geometrical layout. The advantages of metaheuristic search were described. The criteria influencing the investment were defined. The fitness function used in the analysis was described. The example of using the optimization algorithm with the help of self developed computer software was described.
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Data from the survey on Gdańsk University of Technology foreign graduates' professional careers
Open Research DataThe dataset includes data from the survey on the Gdańsk University of Technology foreign graduates on their professional careers. The research was conducted over a four-month period, from December 2019 to March 2020, using the Computer-Assisted Web Interview (CAWI). The research sample included 142 respondents. The study concerned such variables such...
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Data from the survey on socio-demographic characteristics of Gdańsk University of Technology foreign graduates
Open Research DataThe dataset includes data from the survey on the Gdańsk University of Technology foreign graduates socio-demographic characteristics. The research was conducted over a four-month period, from December 2019 to March 2020, using the Computer-Assisted Web Interview (CAWI). The research sample included 142 respondents. The study concerned such variables...
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Mariusz Matuszek dr inż.
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Multibaem Sonar Records Data Decimation Using Hierarchical Spline Interpolation
PublicationMultibeam sonar records feature high vertical and horizontal resolution. Interpolating and approximating, eventually displaying of of high volume scattered 3D raster data leads to some difficulties related to a computer processing power. The paper presents some advantages of using hierarchical splines in the context. Such an approach facilitates real time 3D MBS data rendering.
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Applying of thin plate boundary condition in analysis of ship’s magnetic field
PublicationThis paper presents computer simulations of ship’s magnetic signatures using a new thin plate boundary condition implemented in the Opera-3d 18R2 program. The paper aims to check the magnetic signatures’ numerical calculations precision of objects using the thin plate boundary conditions and analysis of the magnetic signature of ship with a degaussing system and with and without inner devices.
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The flux compression generator load parameters selection
PublicationComputer simulation results of the flux compression generator (FCG) loaded with an inductor has been presented in this paper. Simulation research has been performed in order to select the parameters of FCG load coil properly. The influence of the load inductance and resistance on the current gain factor and the magnetic field energy accumulated in a load coil has been investigated.
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Diploma seminar - 2022
e-Learning CoursesCourse "Diploma seminar" is dedicated for students of NT, Nanostructures and Computer Simulations in Material Sciences, MSc program, sem.4.
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Diploma seminar - 2023
e-Learning CoursesCourse "Diploma seminar" is dedicated for students of NT, Nanostructures and Computer Simulations in Material Sciences, MSc program, sem.4.
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Identification and molecular modeling of a novel lipase from an Antarctic soil metagenomic library.
PublicationIn this work, we present the construction of a metagenomic library in Escherichia coli using pUC19 vector and environmental DNA directly isolated from Antarctic topsoil and screened for lipolytic enzymes. The screening on agar supplemented with olive oil and rhodamine B revealed one clone with lipolytic activity (Lip1) out of 11,000 E. coli clones. This clone harbored a plasmid, pLip1, which has an insert of 4722 bp that has been...
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Tuning of the plasmon resonance location in Au nanostructures coated with a ultrathin film of Al2O3 – Optical measurements and FDTD simulations
PublicationThe Au nanostructures have been coated with an ultra-thin films of amorphous aluminium oxide. Optical absorption spectra show the influence of the thickness of Al2O3 on plasmon resonance wavelength. The observed red-shift of the resonance location with the increase of the thickness of the Al2O3 film, can be explained by the change in the dielectric function of this film. It allows control of the optical spectra of the coated particles....
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DETERMINATION OF ADDITIONAL TENSION IN TOWED STREAMER CABLE TRIGGERED BY COLLISION WITH UNDERWATER MOVING OBJECT
PublicationThe paper deals with issues connected with the behaviour of a streamer cable towed by a survey seismic vessel when the cable undergoes a strike triggered by collision with an underwater moving object. The consequences of such collisions may be both threat to the life of marine animals or damage to underwater units and large economic losses suffered by vessel owners. The risk of such collisions has increased over the last years...
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Towards improved energy efficiency of future smart ships by application of advanced CFD simulations – case study
PublicationThe international trade plays crucial role in today’s globally developed world’s economy. Many people are unaware of the unimaginable volume of cargo being transported every year by oceans and seas. For most of the time invisible from land the shipping industry preserves its strong position of the most cost-efficient and environmental friendly mean of transport. However during last years the shipping industry is under great pressure...
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Combining Road Network Data from OpenStreetMap with an Authoritative Database
PublicationComputer modeling of road networks requires detailed and up-to-date dataset. This paper proposes a method of combining authoritative databases with OpenStreetMap (OSM) system. The complete route is established by finding paths in the graph constructed from partial data obtained from OSM. In order to correlate data from both sources, a method of coordinate conversion is proposed. The algorithm queries road data from OSM and provides...
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Numerical Simulations and Tracer Studies as a Tool to Support Water Circulation Modeling in Breeding Reservoirs
PublicationThe article presents a proposal of a method for computer-aided design and analysis of breeding reservoirs in zoos and aquariums. The method applied involves the use of computer simulations of water circulation in breeding pools. A mathematical model of a pool was developed, and a tracer study was carried out. A simplified model of two-dimensional flow in the form of a biharmonic equation for the stream function (converted into...
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Video Semantic Analysis Framework based on Run-time Production Rules - Towards Cognitive Vision
PublicationThis paper proposes a service-oriented architecture for video analysis which separates object detection from event recognition. Our aim is to introduce new tools to be considered in the pathway towards Cognitive Vision as a support for classical Computer Vision techniques that have been broadly used by the scientific community. In the article, we particularly focus in solving some of the reported scalability issues found in current...
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Study of Statistical Text Representation Methods for Performance Improvement of a Hierarchical Attention Network
PublicationTo effectively process textual data, many approaches have been proposed to create text representations. The transformation of a text into a form of numbers that can be computed using computers is crucial for further applications in downstream tasks such as document classification, document summarization, and so forth. In our work, we study the quality of text representations using statistical methods and compare them to approaches...
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An Approximation of the Zero Error Capacity by a Greedy Algorithm.
PublicationWe present a greedy algorithm that determines a lower bound on the zero error capacity. The algorithm has many new advantages, e.g., it does not store a whole product graph in a computer memory and it uses the so-called distributions in all dimensions to get a better approximation of the zero error capacity. We also show an additional application of our algorithm.
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An Approximation of the Zero Error Capacity by a Greedy Algorithm
PublicationWe present a greedy algorithm that determines a lower bound on the zero error capacity. The algorithm has many new advantages, e.g., it does not store a whole product graph in a computer memory and it uses the so-called distributions in all dimensions to get a better approximation of the zero error capacity. We also show an additional application of our algorithm.
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A New Quaternion Encryption Scheme for Image Transmission
PublicationQuaternions are hypercomplex number of rank 4. They are often applied to mechanics in three-dimensional space and considered as one of the best ways to represent rotations. In this paper a new encryption scheme, based on the rotation of data vector in three-dimensional space around another quaternion (key) is proposed. A computer-based simulation was created to analyze the potential of the proposed encryption technique.
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Usability Techniques Possible to Use in Diagnostic Tools Interface Improvement
PublicationThe development of diagnostic tools has caused a rapid increase in the amount of information generated and presented, necessitating the use of computer displays as an interface to data presentation and the use of modern diagnostic tools. The paper presents methods for testing usability that can be used in designing and improving the quality of interfaces of modern diagnostic tools that use communication through graphical user interfaces.
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Obliczenia rozproszone w syntezie obrazów parametrycznych
PublicationArtykuł prezentuje rozproszony system przetwarzania danych dla potrzeb syntezy obrazów parametrycznych. Zastosowano w tym celu metodę Compute Server.