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Application of Doubly Connected Dominating Sets to Safe Rectangular Smart Grids
PublikacjaSmart grids, together with the Internet of Things, are considered to be the future of the electric energy world. This is possible through a two-way communication between nodes of the grids and computer processing. It is necessary that the communication is easy and safe, and the distance between a point of demand and supply is short, to reduce the electricity loss. All these requirements should be met at the lowest possible cost....
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Easy and hard instances of arc ranking in directed graphs
PublikacjaArtykuł dotyczy uporządkowanego kolorowania łuków grafów skierowanych. Problem polega na takim przyporządkowaniu liczb łukom digrafu, aby każda skierowana ścieżka łącząca dwa łuki o tej samej liczbie (kolorze) zawierała łuk o kolorze wyższym. Praca podaje liniowy optymalny algorytm dla pewnego szczególnego przypadku, oraz zawiera dowód, iż problem ten jest obliczeniowo trudny dla 3-dzielnych acyklicznych digrafów i stałej liczby...
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On the complexity of distributed greedy coloring
PublikacjaW pracy rozważono problem kolorowania grafów przy dodatkowym założeniu, że kolor żadnego wierzchołka nie może zostać zmniejszony bez zmiany kolorów przynajmniej jednego z jego sąsiadów. Przeprowadzone rozważania dotyczyły złożoności obiczeniowej problemu w modelu Liniala obliczeń rozproszonych. Podano ograniczenia dolne i górne złożoności problemu oraz zestawiono problem z innymi pokrewnymi zagadnieniami grafowymi.
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Fault tolerant guarding of grids
PublikacjaW pracy rozważano problem strzeżenia krat dwuwymiarowych przez dwa niezależne zespoły straży. Wykazano, że zagadnienie minimalizacyjne jest NP-trudne i zaproponowano dla niego wielomianowy algorytm 6/5-przybliżony.
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The computational complexity of the backbone coloring problem for planar graphs with connected backbones
PublikacjaIn the paper we study the computational complexity of the backbone coloring problem for planar graphs with connected backbones. For every possible value of integer parameters λ≥2 and k≥1 we show that the following problem: Instance: A simple planar graph GG, its connected spanning subgraph (backbone) HH. Question: Is there a λ-backbone coloring c of G with backbone H such that maxc(V(G))≤k? is either NP-complete or polynomially...
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An O ( n log n ) algorithm for finding edge span of cacti
PublikacjaLet G=(V,E) be a nonempty graph and xi be a function. In the paper we study the computational complexity of the problem of finding vertex colorings c of G such that: (1) |c(u)-c(v)|>=xi(uv) for each edge uv of E; (2) the edge span of c, i.e. max{|c(u)-c(v)|: uv belongs to E}, is minimal. We show that the problem is NP-hard for subcubic outerplanar graphs of a very simple structure (similar to cycles) and polynomially solvable for...
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On some open questions for Ramsey and Folkman numbers
PublikacjaWe discuss some of our favorite open questions about Ramsey numbers and a related problem on edge Folkman numbers. For the classical two-color Ramsey numbers, we first focus on constructive bounds for the difference between consecutive Ramsey numbers. We present the history of progress on the Ramsey number R(5,5) and discuss the conjecture that it is equal to 43.
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Optimal edge-coloring with edge rate constraints
PublikacjaWe consider the problem of covering the edges of a graph by a sequence of matchings subject to the constraint that each edge e appears in at least a given fraction r(e) of the matchings. Although it can be determined in polynomial time whether such a sequence of matchings exists or not [Grötschel et al., Combinatorica (1981), 169–197], we show that several questions about the length of the sequence are computationally intractable....
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Equitable coloring of hypergraphs
PublikacjaA hypergraph is equitablyk-colorable if its vertices can be partitioned into k sets/colorclasses in such a way that monochromatic edges are avoided and the number of verticesin any two color classes differs by at most one. We prove that the problem of equitable 2-coloring of hypergraphs is NP-complete even for 3-uniform hyperstars. Finally, we apply the method of dynamic programming for designing a polynomial-time algorithm to...
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The Backbone Coloring Problem for Bipartite Backbones
PublikacjaLet G be a simple graph, H be its spanning subgraph and λ≥2 be an integer. By a λ -backbone coloring of G with backbone H we mean any function c that assigns positive integers to vertices of G in such a way that |c(u)−c(v)|≥1 for each edge uv∈E(G) and |c(u)−c(v)|≥λ for each edge uv∈E(H) . The λ -backbone chromatic number BBCλ(G,H) is the smallest integer k such that there exists a λ -backbone coloring c of G with backbone H satisfying...
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Optimal backbone coloring of split graphs with matching backbones
PublikacjaFor a graph G with a given subgraph H, the backbone coloring is defined as the mapping c: V(G) -> N+ such that |c(u)-c(v)| >= 2 for each edge uv \in E(H) and |c(u)-c(v)| >= 1 for each edge uv \in E(G). The backbone chromatic number BBC(G;H) is the smallest integer k such that there exists a backbone coloring with max c(V(G)) = k. In this paper, we present the algorithm for the backbone coloring of split graphs with matching backbone.
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On-line P-coloring of graphs
PublikacjaFor a given induced hereditary property P, a P-coloring of a graph G is an assignment of one color to each vertex such that the subgraphs induced by each of the color classes have property P. We consider the effectiveness of on-line P-coloring algorithms and give the generalizations and extensions of selected results known for on-line proper coloring algorithms. We prove a linear lower bound for the performance guarantee function...
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On Computational Aspects of Greedy Partitioning of Graphs
PublikacjaIn this paper we consider a problem of graph P-coloring consisting in partitioning the vertex set of a graph such that each of the resulting sets induces a graph in a given additive, hereditary class of graphs P. We focus on partitions generated by the greedy algorithm. In particular, we show that given a graph G and an integer k deciding if the greedy algorithm outputs a P-coloring with a least k colors is NP-complete for an infinite...
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Interval incidence coloring of subcubic graphs
PublikacjaIn this paper we study the problem of interval incidence coloring of subcubic graphs. In [14] the authors proved that the interval incidence 4-coloring problem is polynomially solvable and the interval incidence 5-coloring problem is N P-complete, and they asked if χii(G) ≤ 2∆(G) holds for an arbitrary graph G. In this paper, we prove that an interval incidence 6-coloring always exists for any subcubic graph G with ∆(G) = 3.
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Screening of predicted synergistic multi-target therapies in glioblastoma identifies new treatment strategies
PublikacjaAbstract Background IDH-wildtype glioblastoma (GBM) is a highly malignant primary brain tumor with a median survival of 15 months after standard of care, which highlights the need for improved therapy. Personalized combination therapy has shown to be successful in many other tumor types and could be beneficial for GBM patients. Methods We performed the largest drug combination screen to date in GBM, using a high-throughput effort...
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Complexity Issues on of Secondary Domination Number
PublikacjaIn this paper we study the computational complexity issues of the problem of secondary domination (known also as (1, 2)-domination) in several graph classes. We also study the computational complexity of the problem of determining whether the domination and secondary domination numbers are equal. In particular, we study the influence of triangles and vertices of degree 1 on these numbers. Also, an optimal algorithm for finding...
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Entangled rendezvous: a possible application of Bell non-locality for mobile agents on networks
PublikacjaRendezvous is an old problem of assuring that two or more parties, initially separated, not knowing the position of each other, and not allowed to communicate, are striving to meet without pre-agreement on the meeting point. This problem has been extensively studied in classical computer science and has vivid importance to modern and future applications. Quantum non-locality, like Bell inequality violation, has shown that in many...
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Non-Perfect Propagation of Information to a Noisy Environment with Self-Evolution
PublikacjaWe study the non-perfect propagation of information for evolving a low-dimensional environment that includes self-evolution as well as noisy initial states and analyse the interrelations between the degree of objectivization and environment parameters. In particular, we consider an analytical model of three interacting qubits and derive its objectivity parameters. The numerical analysis shows that the quality of the spectrum broadcast...
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An Approximation of the Zero Error Capacity by a Greedy Algorithm.
PublikacjaWe present a greedy algorithm that determines a lower bound on the zero error capacity. The algorithm has many new advantages, e.g., it does not store a whole product graph in a computer memory and it uses the so-called distributions in all dimensions to get a better approximation of the zero error capacity. We also show an additional application of our algorithm.
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Greencoin: prototype of a mobile application facilitating and evidencing pro-environmental behavior of citizens
PublikacjaAmong many global challenges, climate change is one of the biggest challenges of our times. While it is one of the most devastating problems humanity has ever faced, one question naturally arises: can individuals make a difference? We believe that everyone can contribute and make a difference to the community and lives of others. However, there is still a lack of effective strategies to promote and facilitate pro-environmental...
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An Approximation of the Zero Error Capacity by a Greedy Algorithm
PublikacjaWe present a greedy algorithm that determines a lower bound on the zero error capacity. The algorithm has many new advantages, e.g., it does not store a whole product graph in a computer memory and it uses the so-called distributions in all dimensions to get a better approximation of the zero error capacity. We also show an additional application of our algorithm.
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Block graphs with large paired domination multisubdivision number
PublikacjaThe paired domination multisubdivision number of a nonempty graph G, denoted by msdpr(G), is the smallest positive integer k such that there exists an edge which must be subdivided k times to increase the paired domination number of G. It is known that msdpr(G) ≤ 4 for all graphs G. We characterize block graphs with msdpr(G) = 4.
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Better polynomial algorithms for scheduling unit-length jobs with bipartite incompatibility graphs on uniform machines
PublikacjaThe goal of this paper is to explore and to provide tools for the investigation of the problems of unit-length scheduling of incompatible jobs on uniform machines. We present two new algorithms that are a significant improvement over the known algorithms. The first one is Algorithm 2 which is 2-approximate for the problem Qm|p j = 1, G = bisubquartic|Cmax . The second one is Algorithm 3 which is 4-approximate for the problem Qm|p...
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Koala graph coloring library: an open graph coloring library for real-world applications
PublikacjaPomimo intensywnej pracy naukowej na polu kolorowania grafów, nie jest znana kompletna i dedykowana biblioteka programistyczna. Celem artykułu jest zaproponowanie architektury takiej biblioteki. Celem jest spełnienie oczekiwań wypływających z rzeczywistych zastosowań, w szczególności spełnienie potrzeb wydajnościowych. Zaimplementowano szereg algorytmów cheurystycznego kolorowania grafów. Przyjętym językiem programowania jest C++....
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The Complexity of Zero-Visibility Cops and Robber
PublikacjaIn this work we deal with the computational complexity aspects of the zero-visibility Cops and Robber game. We provide an algorithm that computes the zero-visibility copnumber of a tree in linear time and show that the corresponding decision problem is NP-complete even for the class of starlike graphs.
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The searchlight problem for road networks
PublikacjaWe consider the problem of searching for a mobile intruder hiding in a road network given as the union of two or more lines, or two or more line segments, in the plane. Some of the intersections of the road network are occupied by stationary guards equipped with a number of searchlights, each of which can emit a single ray of light in any direction along the lines (or line segments) it is on. The goal is to detect the intruder,...
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The complexity of node blocking for dags
PublikacjaRozważamy następującą grę (pomiędzy dwoma graczami) kombinatoryczną o nazwie ''node blocking''. Dany jest graf skierowany. Każdy wierzchołek może być zajęty przez co najwyżej jeden token. Wyróżniamy dwa kolory tokenów, biały i czarny, każdy gracz może przemieszczać tylko własne tokeny. Gracze wykonują ruchy naprzemiennie. Ruch polega na wyborze dowolnego tokena własnego koloru i przesunięciu go na dowolnego niezajętego przez inny...
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Phutball is PSPACE-hard
PublikacjaW pracy dowodzimy, że gra ''Phutball'' (Philosopher's Football) jest PSPACE-trudna.
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Matching Split Distance for Unrooted Binary Phylogenetic Trees
PublikacjaRekonstrukcja drzew ewolucji jest jednym z głównych celów w bioinformatyce. Drzewa filogenetyczne reprezentuje historię ewolucji i związki pokrewieństwa między różnymi gatunkami. W pracy proponujemy nową ogólną metodę określania odległości między nieukorzenionymi drzewami filogenetycznymi, szczególnie użyteczną dla dużych zbiorów gatunków. Następnie podajemy szczegółowe własności jednej metryki określonej przy użyciu tej metody...
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A lower bound on the double outer-independent domination number of a tree
PublikacjaA vertex of a graph is said to dominate itself and all of its neighbors. A double outer-independent dominating set of a graph G is a set D of vertices of G such that every vertex of G is dominated by at least two vertices of D, and the set V(G)D is independent. The double outer-independent domination number of a graph G, denoted by gamma_d^{oi}(G), is the minimum cardinality of a double outer-independent dominating set of G. We...
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Strategic balance in graphs
PublikacjaFor a given graph G, a nonempty subset S contained in V ( G ) is an alliance iff for each vertex v ∈ S there are at least as many vertices from the closed neighbourhood of v in S as in V ( G ) − S. An alliance is global if it is also a dominating set of G. The alliance partition number of G was defined in Hedetniemi et al. (2004) to be the maximum number of sets in a partition of V ( G ) such that each set is an alliance. Similarly,...
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On-Line Partitioning for On-Line Scheduling with Resource Conflicts
PublikacjaWithin this paper, we consider the problem of on-line partitioning the sequence of jobs which are competing for non-sharable resources. As a result of partitioning we get the subsets of jobs that form separate instances of the on-line scheduling problem. The objective is to generate a partition into the minimum number of instances such that the response time of any job in each instance is bounded by a given constant. Our research...
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Network Graph Transformation Providing Fast Calculation of Paths for Resilient Routing
PublikacjaProtection of transmission against failures can be appropriately dealt with by alternative paths. However, common schemes (e.g., Bhandaris scheme) are characterized by a remarkable delay while determining the transmission paths. This in turn may have a serious impact on serving dynamic demands (characterized by relatively short duration time). As a remedy to this problem, we introduce an approach to pre-compute the sets of disjoint...
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Pose-Invariant Face Detection by Replacing Deep Neurons with Capsules for Thermal Imagery in Telemedicine
PublikacjaAbstract— The aim of this work was to examine the potential of thermal imaging as a cost-effective tool for convenient, non- intrusive remote monitoring of elderly people in different possible head orientations, without imposing specific behavior on users, e.g. looking toward the camera. Illumination and pose invariant head tracking is important for many medical applications as it can provide information, e.g. about vital signs, sensory...
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Graph classes generated by Mycielskians
PublikacjaIn this paper we use the classical notion of weak Mycielskian M'(G) of a graph G and the following sequence: M'_{0}(G) =G, M'_{1}(G)=M'(G), and M'_{n}(G)=M'(M'_{n−1}(G)), to show that if G is a complete graph oforder p, then the above sequence is a generator of the class of p-colorable graphs. Similarly, using Mycielskian M(G) we show that analogously defined sequence is a generator of the class consisting of graphs for which the...
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Deep Learning-Based, Multiclass Approach to Cancer Classification on Liquid Biopsy Data
PublikacjaThe field of cancer diagnostics has been revolutionized by liquid biopsies, which offer a bridge between laboratory research and clinical settings. These tests are less invasive than traditional biopsies and more convenient than routine imaging methods. Liquid biopsies allow studying of tumor-derived markers in bodily fluids, enabling the development of more precise cancer diagnostic tests for screening, disease monitoring, and...
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Paired domination versus domination and packing number in graphs
PublikacjaGiven a graph G = (V(G), E(G)), the size of a minimum dominating set, minimum paired dominating set, and a minimum total dominating set of a graph G are denoted by γ (G), γpr(G), and γt(G), respectively. For a positive integer k, a k-packing in G is a set S ⊆ V(G) such that for every pair of distinct vertices u and v in S, the distance between u and v is at least k + 1. The k-packing number is the order of a largest kpacking and...
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Scheduling on Uniform and Unrelated Machines with Bipartite Incompatibility Graphs
PublikacjaThe problem of scheduling jobs on parallel machines under an incompatibility relation is considered in this paper. In this model, a binary relation between jobs is given and no two jobs that are in the relation can be scheduled on the same machine. We consider job scheduling under the incompatibility relation modeled by a bipartite graph, under the makespan optimality criterion, on uniform and unrelated machines. Unrelated machines...
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Graphs hard-to-process for greedy algorithm MIN
PublikacjaWe compare results of selected algorithms that approximate the independence number in terms of the quality of constructed solutions. Furthermore, we establish smallest hard- to-process graphs for the greedy algorithm MIN.
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Polynomial Algorithm for Minimal (1,2)-Dominating Set in Networks
PublikacjaDominating sets find application in a variety of networks. A subset of nodes D is a (1,2)-dominating set in a graph G=(V,E) if every node not in D is adjacent to a node in D and is also at most a distance of 2 to another node from D. In networks, (1,2)-dominating sets have a higher fault tolerance and provide a higher reliability of services in case of failure. However, finding such the smallest set is NP-hard. In this paper, we...
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Chromatic cost coloring of weighted bipartite graphs
PublikacjaGiven a graph G and a sequence of color costs C, the Cost Coloring optimization problem consists in finding a coloring of G with the smallest total cost with respect to C. We present an analysis of this problem with respect to weighted bipartite graphs. We specify for which finite sequences of color costs the problem is NP-hard and we present an exact polynomial algorithm for the other finite sequences. These results are then extended...
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A note on polynomial algorithm for cost coloring of bipartite graphs with Δ ≤ 4
PublikacjaIn the note we consider vertex coloring of a graph in which each color has an associated cost which is incurred each time the color is assigned to a vertex. The cost of coloring is the sum of costs incurred at each vertex. We show that the minimum cost coloring problem for n-vertex bipartite graph of degree ∆≤4 can be solved in O(n^2) time. This extends Jansen’s result [K.Jansen,The optimum cost chromatic partition problem, in:...
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Formalizm i metody szeregowania zadań dla potrzeb redukcji poboru mocy cyfrowych układów CMOS
PublikacjaW pracy przedstawiono związki pomiędzy modelami formalnymi stosowanymi w klasycznym szeregowaniu zadań a metodami wykorzystywanymi w syntezie wysokiego poziomu układów cyfrowych CMOS. Zagadnienia optymalizacyjne pojawiające się w obu tych problemach mogą być w pewnym sensie transformowalne. Pozwala to na przenoszenie wybranych metod rozwiązań z jednego problemu do drugiego.
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Parallel tabu search for graph coloring problem
PublikacjaTabu search is a simple, yet powerful meta-heuristic based on local search that has been often used to solve combinatorial optimization problems like the graph coloring problem. This paper presents current taxonomy of patallel tabu search algorithms and compares three parallelization techniques applied to Tabucol, a sequential TS algorithm for graph coloring. The experimental results are based on graphs available from the DIMACS...
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Aplikacja wspomagająca przetwarzanie sekwencji dna: moduł edycji chromatogramu
PublikacjaModuł edycji chromatogramu jest częścią większej aplikacji, służącej do wspomagania przetwarzania danych pochodzących z sekwencjonowania DNA. Aplikacja skonstruowana jest z odrębnych, samodzielnych programów, które współpracują dwiema drogami - poprzez popularne formaty plików, co umożliwia wprowadzenie do modułów danych opracowanych częściowo w aplikacjach zewnętrznych, oraz poprzez przesyłanie danych pomiędzy modułami, co usprawnia...
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Identyfikacja terenu za pomocą autonomicznego robota
PublikacjaW pracy rozważane jest zagadnienie identyfikacji nieznanego terenuprzy pomocy autonomicznego robota o ograniczonym zasięguwidzialności. Przyjęty model matematyczny zakłada, że teren mapostać ograniczonej dwuwymiarowej mapy podzielonej na identycznekwadratowe obszary (pola) przylegające do siebie bokami. Zadaniemautonomicznego robota, którego zasięg widzialności ogranicza siedo pól przylegających do miejsca, w którym się znajduje,...
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Aplikacja wspomagająca przetwarzanie sekwencji dna: moduł dopasowań
PublikacjaBiologia molekularna jest obecnie bardzo dynamicznie rozwijającą się dziedziną nauki. Wzrost mocy obliczeniowej komputerów pozwala na coraz szybszą i dokładniejszą analizę wielocząsteczkowych biologicznych polimerów. Poniższy artykuł przedstawia jeden z modułów programu AlignGator - modułowego systemu przeznaczonego do analizy DNA. Omawiany moduł pozwala na tworzenie, oraz edycję wielodopasowań. W początkowej części artykułu opisane...
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Grafowy model macierzy ultrametrycznej i jego zastosowania w filogenezie i t-kolorowaniu
PublikacjaW pracy podano definicję macierzy ultrametrycznej i jej reprezentację grafową. Macierz ta jest wykorzystywana głównie w filogenezie, do budowy drzew ultrametrycznych. W pracy opisano jeden z algorytmów słuzący do konstrukcji takich drzew. Ponadto, omówiono inne możliwe zastosowania modelu grafowego macierzy, tym razem dla problemu przydziału częstotliwości dla nadajników. Zaproponowano również rozwiązanie tego problemu w szczególnym...
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Sztuczne systemy immunologiczne w optymalizacji dyskretnej
PublikacjaSztuczne systemy immunologiczne to modele komputerowe oparte na niektórych właściwościach systemu odpornościowego kręgowców. Znajdują one szereg zastosowań m. in. w optymalizacji dyskretnej. Praca ta przedstawia informacje na temat trzech modeli obliczeniowych inspirowanych funkcjonowaniem układu immunologicznego, ich podstaw biologicznych i moŜliwych zastosowań. Artykuł zawiera opis algorytmu selekcji klonalnej w wersji optymalizacyjnej...
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On some ramsey and turan-type numbers for paths and cycles
PublikacjaUdowodniono, że R(P_3,C_k,C_k)= R(C_k,C_k)= 2k - 1, dla nieparzystych k. Udowodniono, że R(P_4,P_4,C_k) = k + 2 oraz R(P_3,P_5,C_k) = k + 1 dla k > 2.