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Search results for: casp, covid, ema, model accuracy, protein structure prediction, sars-cov-2
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Dependence of biological sensing on temperature based on investigation of SARS-CoV-2
Open Research DataPresented dataset is the result of an investigation of the attachment of SARS-CoV-2 specific IgG in the temepratures relevant in biology. The samples were measured during a period of 15 minutes, at 5°C, 25°C and 55°C. The measurements were performed using the microspher-based fiber-optic sensor, as an interferometer. The broadband optical light source...
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High resolution XPS analysis of BDD electrode functionalization steps towards SARS-CoV-2 detection
Open Research DataThis dataset contains the results of the high-resolution XPS analyses of a set of boron-doped diamond (BDD) electrodes after consecutive functionalization steps toward anchoring of a receptor capable of SARS-CoV-2 virus detection. The analysis was carried out in the binding energy range of C1s, N1s, O1s, Ni2p3/2. The measurements were carried out on...
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Experimental dataset on detection of SARS-CoV-2 specific IgG antibodies by the fiber optic microsphere-based sensor
Open Research DataThe presented dataset is related to experimental detection of the ARS-CoV-2 specific IgG antibodies by the fibre optic microsphere-based sensor. To perform measurement we used a dedicated microsphere-based probe whose surface was immobilized.
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Determination of viscosity changes of protein hydrolyzate solutions depending on shear rate
Open Research DataRheological characteristics of connective tissue protein solutions were made on the basis of viscosity measurement using a Brookfield viscometer using LV SC4 - 27 spindles and shear rate of 85 s-1 (Fig. 1). Solutions of protein hydrolysates with a concentration of 2% in 0.5M acetic acid were prepared.
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A model of stealth maritime object having some innovative solutions concerning the object form, structure and materials.
Open Research DataThe aim of the project is to work out a model of the stealth maritime object which will have innovative solutions concerning the object form, structure and materials. These solutions should enable a modification of combinations of the object features defining the object stealth characteristics (difficulty of the object detection in the water). It is...
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COVID-19 tax response of selected European countries
Open Research DataA large part of the aid mechanisms offered by individual European countries in connection with the outbreak of the crisis caused by the COVID-19 pandemic concerned the granting of the so-called tax preferences. It should be noted that a tax preference is any deviation from the adopted tax rules, resulting in a reduction of the final tax burden. The...
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Compliance with the restrictions during the COVID-19 pandemic in Poland and Sweden
Open Research DataOur study is aimed to check if the difference between Sweden and Poland in trust is related to negative affective reactions to authorities and law antipathy being manifestations of lack of trust and related to value-based legitimacy, behavioral legitimacy and prosocial justification of compliance with the restrictions put on citizens to limit the spread...
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The influence of the distance of the pyrometer from the surface of the radiating object on the accuracy of measurements
Open Research DataDuring the COVID-19 epidemic, non-contact body temperature measurement has become very important. This dataset contain results of measurements of the four professional commercially available pyrometers. The CHY 314P, TM-F03B, TFA 31.1125 and Abatronic AB-8855 where tested in function of measuring distance from the surface of the radiating black body....
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The surface of a fragment of the structure of an integrated circuit in the semi-contact mode.
Open Research DataThe surface of a fragment of the structure of an integrated circuit. Topographic measurements in the semi-contact mode. NTEGRA Prima (NT-MDT) device. NSG 01 probe.
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Internal legal acts of technical and medical universities in Poland regulating classes conducted in-person during the Covid-19 pandemic
Open Research DataA database of legal acts and other internal documents of medical and technical universities in Poland regulating the way of organizing in-person or hybrid classes during the COVID-19 pandemic from the summer semester 2019/2020 to the winter semester 2020/2021.Documents were encoded in two separate coding systems using the MAXQDA program for qualitative...
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Areas of updraft air motion from WRF model simulations.
Open Research DataPresented dataset is a part of numerical modelling study focusing on the analysis of sea ice floes size distribution (FSD) influence on the horizontal and vertical structure of convection in the atmosphere. The total area and spatial arrangement of the updrafts indicates that the FSD affects the total moisture content and the values of area averaged...
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Functional and spatial structure analysis – Lower Sopot (Dolny Sopot) district case study, study proposal no 2, February 2021
Open Research DataThe data presents results of work within the studies of the conditions of the district in the context of the city, Lower Sopot (Dolny Sopot) district, study proposal no 2, from February 2021. The goal of the research process was to present the functional and spatial structure analysis of the area located in Lower Sopot (Dolny Sopot) district in the...
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Structure of FUS revenues after the first half of 2020
Open Research DataIn 2020 the fund received a subsidy from the state budget in the amount of PLN 20.1 billion, which constitutes 60.0% of the plan. At the same time, it should be mentioned that from 2019 the subsidy covers funds that in previous years were shown in the item reimbursement of contributions transferred to OFE. In addition, from May this year. The Social...
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Functional and spatial structure analysis – Gdańsk-Lower City (Dolne Miasto) district case study, study proposal no 2, February 2021
Open Research DataThe data presents results of work within the studies of the conditions of the district in the context of the city, Gdańsk-Lower City (Dolne Miasto) district, study proposal no 2, from February 2021. The goal of the research process was to present the functional and spatial structure analysis of the area located in Gdańsk-Lower City (Dolne Miasto) district...
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Testing HIADAC high impedance analyzer in Trento University laboratory on Baunier's RC model using 2 wire probe
Open Research DataThe dataset presents impedance spectrum of Baunier's RC model. This object was used to test high-impedance analyzer for diagnostic of anticorossion coatings (HIADAC) realized in the frame of Eureka project E!3174. The impedance spectrum frequency range (1 mHz – 100 kHz) was selected in order to test the whole measureement range of the analyzer. In...
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The Rayleigh model of the multipath fading channel
Open Research DataThe dataset contains the results of simulations that are part of the research on modelling the multipath fading in the communication channel. The Rayleigh fading envelope is generated using the Monte-Carlo simulation (MCS) in the LabVIEW programming environment.
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The Weibull model of the multipath fading channel
Open Research DataThe dataset contains the results of simulations that are part of the research on modelling the multipath fading in the communication channel. The Weibull fading envelope is generated using the Monte-Carlo simulation (MCS) in the LabVIEW programming environment.
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Experimental database of 3D lattice structure scaffolds testing
Open Research DataDataset contains results of validation (experimental testing) of 3D lattice scaffolds proposed in the paper "Mathematical approach to design 3D scaffolds for the 3D printable bone implant". There are presented three series of experimental testing for each of seven tested scaffolds:
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The α-µ model of the multipath fading channel
Open Research DataThe dataset contains the results of simulations that are part of the research on modelling the multipath fading in the communication channel. The envelope of the α-µ fading process is generated using the Monte-Carlo simulation (MCS) in the LabVIEW programming environment.
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The electrochemical response to BDD electrode functionalization with CD147 receptor
Open Research DataThis dataset contains the results of the electrochemical impedance spectroscopy (EIS) measurements of the boron-doped diamond (BDD) electrode functionalization with CD147 receptor. The functionalized electrode was then used for the electrochemical detection of the SARS-CoV-2 virus S1 protein.
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The electrochemical response to BDD electrode functionalization with ACE2 receptor
Open Research DataThis dataset contains the results of the electrochemical impedance spectroscopy (EIS) measurements of the boron-doped diamond (BDD) electrode functionalization with ACE2 receptor. The functionalized electrode was then used for the electrochemical detection of the SARS-CoV-2 virus S1 protein.
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The electrochemical response to BDD electrode functionalization with IgG2B receptor
Open Research DataThis dataset contains the results of the electrochemical impedance spectroscopy (EIS) measurements of the boron-doped diamond (BDD) electrode functionalization with IgG2B receptor. The functionalized electrode was then used for the electrochemical detection of the SARS-CoV-2 virus S1 protein.
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Ship model resistance - KCS
Open Research DataShip model instantaneous resistance, velocity, pitch and heave measured data for a KCS built and tested in the towing tank of the Faculty of Mechanical Engineering and Ship Technology of Gdansk University of Technology under regular head waves.
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Validation of lumbar spine finite element model
Open Research DataThe functional biomechanics of the lumbar spine have been better understood by finite element method (FEM) simulations. However, there are still areas where the behavior of soft tissues can be better modeled or described in a different way. The purpose of this research is to develop and validate a lumbar spine section intended for biomechanical research....
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Continuation classes for a non-linear Leslie population model with 2 varying parameters
Open Research DataThis dataset contains selected results of rigorous numerical computations conducted in the framework of the research described in the paper "A database schema for the analysis of global dynamics of multiparameter systems" by Z. Arai, W. Kalies, H. Kokubu, K. Mischaikow, H. Oka, P. Pilarczyk, published in SIAM Journal on Applied Dynamical Systems (SIADS),...
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Continuation classes for a two-patch vaccination model
Open Research DataThis dataset contains selected results of rigorous numerical computations described in Section 5 of the paper "Rich bifurcation structure in a two-patch vaccination model" by D.H. Knipl, P. Pilarczyk, G. Röst, published in SIAM Journal on Applied Dynamical Systems (SIADS), Vol. 14, No. 2 (2015), pp. 980–1017, doi: 10.1137/140993934.
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Hydrodynamic reanalysis of currents in the Baltic Sea using the PM3D model
Open Research DataThe dataset contains the results of numerical modeling of currents in the Baltic Sea since 1998. A long-term reanalysis was performed using a three-dimensional hydrodynamic model PM3D (Kowalewski and Kowalewska-Kalkowska, 2017), a new version of the M3D model (Kowalewski, 1997).
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The generalized Suzuki model of the multipath fading channel
Open Research DataThe dataset contains the results of simulations that are part of the research on modelling the multipath fading in the communication channel. The generalized Suzuki fading envelope is generated using the Monte-Carlo simulation (MCS) in the LabVIEW programming environment.
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3D knee model G with reduced thickness of articular cartilage - input text file for computation
Open Research DataThe finite element method was used to simulate the stance phase of the gait cycle. An intact knee model was prepared based on magnetic resonance scans of the left knee joint of a healthy volunteer. In the model G articular cartilage thickness was reduced in specific areas to simulate degenerative changes in the medial knee osteoarthritis. The file was...
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Model dynamic electrochemical impedance spectroscopy (DEIS) results obtained with various DC polarization rates
Open Research DataThe dataset contains results of model dynamic electrochemical impedance spectroscopy studies carried out on a setup of 10 diodes in series, which were connected in parallel with a condenser. The impedance data were acquired every 1 s (the analytic window length for Fourier Transform was 1 s). The model system was polarized between 0 and +8 V with DEIS...
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Employment structure by enterprise size in Poland in 2010-2014
Open Research DataMicro, small and medium-sized enterprises employ in total nearly 70% of all employees working in the corporate sector. Micro enterprises play a decisive role in this respect, accounting for nearly 40% of all employees. This dataset contains data showing the structure of the number of employees in enterprises in 2010-2014.
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St. Adalberd church 3D point model
Open Research DataResearch data show the church of St. Adalbert in Gdansk, Poland. Two layers are presented in the .zip file: one represents the laser scanning result, the second represents the point cloud from 36 photogrammetry images from the UAV system. The aligned point clouds formed the basis to create the high-resolution 3D model. Reference data are laser scanning...
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Parameter values for topological chaos in the reduced Chialvo model
Open Research DataThe following dataset is connected with a map-based neuron model introduced by D. Chialvo (Chaos, Solitons & Fractals, 5 (3-4) 1995). The reduced version of this model is a one dimensional discrete system which describes the evolution of the membrane voltage when the value of the second variable, the recovery variable, is fixed. We have recently...
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The lognormal model of the multipath fading channel
Open Research DataThe dataset contains the results of simulations that are part of the research on modelling the multipath fading in the communication channel. The lognormal fading envelope is generated using the Monte-Carlo simulation (MCS) in the LabVIEW programming environment.
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The structure of lead-silicate glasses containing nanocrystallites of iron oxides
Open Research DataThe structure of iron-doped glasses and glass-ceramics were studied. Samples has the composition of (50 − 0.5x)SiO2–(50 − 0.5x)PbO–xFe2O3, where x = 2, 5, 10, 15, 20 and 25 (in mol%). All samples were prepared by the conventional melt quenching technique; the melting was conducted in air at 1623 K in alumina crucibles. The melts were poured on a brass...
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Structure of the SME sector by economy sectors in Poland and the EU-28
Open Research DataEurostat data show that almost 75% of SMEs in Poland are trade and services, and every seventh enterprise conducts activities related to construction, and every eight - in industry. Comparing the industry structure of Polish companies with the structure of enterprises operating in EU countries, it should be noted that we are characterized by a greater...
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3D knee model M with decreased material parameters of the cartilage and menisci - input text file for computation
Open Research DataThe finite element method was used to simulate the stance phase of the gait cycle. An intact knee model was prepared based on magnetic resonance scans of the left knee joint of a healthy volunteer. In the model M the material parameters of cartilage and menisci were reduced to simulate degenerative changes in the medial knee osteoarthritis. The file...
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The structure of lead-borate glasses containing nanocrystallites of iron oxides
Open Research DataThe structure of iron-doped glasses and glass-ceramics were studied. Glass samples of composition of xFe2O3–(100 − x)(B2O3–2PbO) (2.5 b x b 37, in mol%) were prepared by the conventional melt quenching technique. The melting was conducted in alumina crucibles at the temperature of 1523 K. The melts were poured on a preheated (573 K) brass plate and...
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The Suzuki model of the multipath fading channel
Open Research DataThe dataset contains the results of simulations that are part of the research on modelling the multipath fading in the communication channel. The Suzuki fading envelope is generated using the Monte-Carlo simulation (MCS) in the LabVIEW programming environment.
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Hydrodynamic reanalysis of ice conditions in the Baltic Sea using the PM3D model
Open Research DataThe dataset contains the results of numerical modeling of sea ice in the Baltic Sea since 1998. A long-term reanalysis was performed using the three-dimensional hydrodynamic model PM3D (Kowalewski and Kowalewska-Kalkowska, 2017), a new version of the M3D model (Kowalewski, 1997). A numerical dynamic-thermodynamic model of sea ice (Herman et al. 2011)...
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Morse decompositions for a non-linear Leslie population model with 2 varying parameters
Open Research DataThis dataset contains selected results of rigorous numerical computations conducted in the framework of the research described in the paper "A database schema for the analysis of global dynamics of multiparameter systems" by Z. Arai, W. Kalies, H. Kokubu, K. Mischaikow, H. Oka, P. Pilarczyk, published in SIAM Journal on Applied Dynamical Systems (SIADS),...
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Hydrodynamic reanalysis of sea level in the Baltic Sea using the PM3D model
Open Research DataThe data set contains the results of numerical modelling of sea level fluctuations in the Baltic Sea in the Baltic Sea since 1998. A long-term reanalysis was performed using a three-dimensional hydrodynamic model PM3D (Kowalewski and Kowalewska-Kalkowska, 2017), a new version of the M3D model (Kowalewski, 1997).
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3D model of osteoarthritic (OA) knee joint for analysis of the medial meniscus biomechanics - input text file for computation
Open Research DataThe finite element method was used to simulate the stance phase of the gait cycle. An intact knee model was prepared based on magnetic resonance scans of the left knee joint of a healthy volunteer. In the OA model thickness of articular cartilage and material parameters of the cartilage and menisci were reduced to simulate degenerative changes in the...
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The structure of the enterprise sector by size in Poland and the EU-28 in 2017
Open Research DataEnterprises from the SME sector constitute the majority of companies in Poland and in the European Union countries. However, the structure of domestic enterprises in terms of size and industry differs from the EU average. Taking into account the nature of the business in Poland, more companies operate in trade, and lower in services. However, it should...
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Simulation of the derecho event in Poland of 11th August 2017 using the WRF model and ERA5 data on model levels as initial conditions
Open Research DataThis series contains datasets related to the forecasting of a severe weather event, a derecho, in Poland on 11 August 2017. The simulations were conducted using the Weather Research and Forecasting (WRF) model version 4.2.1 with initial and boundary conditions from ERA5 on model levels. Simulation was performed for two starting hours: at 00:00 and 12:00...
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Morse decompositions for a two-patch vaccination model
Open Research DataThis dataset contains selected results of rigorous numerical computations described in Section 5 of the paper "Rich bifurcation structure in a two-patch vaccination model" by D.H. Knipl, P. Pilarczyk, G. Röst, published in SIAM Journal on Applied Dynamical Systems (SIADS), Vol. 14, No. 2 (2015), pp. 980–1017, doi: 10.1137/140993934.
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Dynamic impedance spectra of programmable dynamically changing RC model based on digital potentiometers
Open Research DataThe dataset presents non-stationary impedance spectra of the RC model presented in the figure below. This model contains two digital potentiometers controlled digitally by the microcontroller. This solution allows to programmably control the value of the model impedance. Thanks to this, the model can be used as a test engine for evaluation of the dynamic...
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The structure of vanadate glasses containing BaTiO3.
Open Research DataThe structure of vanadate glasses doped with BaTiO3 was measured by SEM technique. Samples of the composition of x[BaO,TiO2]–(80 − x)V2O5–20Bi2O3 where x = 5, 10 and 15 in mol% were prepared by a conventional melt quenching technique. The melting was performed in alumina crucibles at the temperature of 1273 K–1373 K. The melts were poured on a preheated...
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Testing impedance analyzer with potentiostat using RC model with Si diode at 200 mV
Open Research DataThe dataset presents impedance spectrum non-linear RC model with diode presented in the figure below. This model was used as a test engine of the impedance analyzer with potentiostat described in the referenced paper. When changing the DC polarisation of the model the non-linear phenomena could be observed. Thanks to this, the model can be used as a...
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Testing impedance analyzer with potentiostat using RC model with Si diode at 0 V
Open Research DataThe dataset presents impedance spectrum non-linear RC model with diode presented in the figure below. This model was used as a test engine of the impedance analyzer with potentiostat described in the referenced paper. When changing the DC polarisation of the model the non-linear phenomena could be observed. Thanks to this, the model can be used as a...