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Turning maneuver as a potential cause of the next stability failure mode for a ship in operation
PublicationThe only formal stability-related requirement referring to a turning maneuver of a ship results from the IS Codeand its application is limited to passenger ships only. The goal of the adopted criterion is to prevent an excessiveangle of heel in turn. Likewise, the remaining prescriptive criteria, this one is simply based on the concept ofa threshold that must not be exceeded. In this case, the angle of heel...
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Medially positioned plate in first metatarsophalangeal joint arthrodesis
PublicationObjective The purpose of this study was to biomechanically compare the stability of first metatarsophalangeal (MTP1) joint arthrodesis with dorsally and medially positioned plates. Methods A physical model of the MTP1 joint consists of printed synthetic bones, a titanium locking plate and screws. In the experiments, samples with dorsally and medially positioned plates were subjected to loading of ground load character in a universal...
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Degradation of a nano-cutting tool: an MD simulation
PublicationW pracy przedstawiono wyniki symulacji wielokrotnego oddziaływania realistycznie ukształtowanego ostrza tnącego z modelowym, nieskończenie twardym ziarnem, przy zastosowaniu metody dynamiki molekularnej. Ostrze składało się z kilkuset tysięcy atomów metalu fcc, traktowanego za pomocą potencjału Suttona-Chena, przesuwane było ze stałą prędkością 20 m/s. Obserwowane deformacje plastyczne pojawiające się na skutek kontaktu ostrza...
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Impact of Climate Change on Water Sources and River‐Floodplain Mixing in the Natural Wetland Floodplain of Biebrza River
PublicationThe origins of river and floodplain waters (groundwater, rainfall, and snowmelt) and their extent during overbank flow events strongly impact ecological processes such as denitrification and vegetation development. However, the long-term sensitivity of floodplain water signatures to climate change remains elusive. We examined how the integrated hydrological model HydroGeoSphere and the Hydraulic Mixing-Cell method could help us...
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Establishing the allosteric mechanism in CRISPR‐Cas9
PublicationAllostery is a fundamental property of proteins, which regulates biochemical information transfer between spatially distant sites. Here, we report on the critical role of molecular dynamics (MD) simulations in discovering the mechanism of allosteric communication within CRISPR‐Cas9, a leading genome editing machinery with enormous promises for medicine and biotechnology. MD revealed how allostery intervenes during at least three...
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Frequency-Variant Double-Zero Single-Pole Reactive Coupling Networks for Coupled-Resonator Microwave Bandpass Filters
PublicationIn this work, a family of frequency-variant reactive coupling (FVRC) networks is introduced and discussed as new building blocks for the synthesis of coupled-resonator bandpass filters with real or complex transmission zeros (TZs). The FVRC is a type of nonideal frequency-dependent inverter that has nonzero elements on the diagonal of the impedance matrix, along with a nonlinear frequency-variation profile of its transimpedance...
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Machine-Learning-Based Global Optimization of Microwave Passives with Variable-Fidelity EM Models and Response Features
PublicationMaximizing microwave passive component performance demands precise parameter tuning, particularly as modern circuits grow increasingly intricate. Yet, achieving this often requires a comprehensive approach due to their complex geometries and miniaturized structures. However, the computational burden of optimizing these components via full-wave electromagnetic (EM) simulations is substantial. EM analysis remains crucial for circuit...
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The effect of fishing basin construction on the behaviour of a footbrdge over the port channel
PublicationThe paper analyses possible causes of failure of the rotating footbridge over the Ustka port channel. In July, 2015, strange behaviour of this object was observed in the form of excessive vibrations of bridge platform suspension rods, with the accompanying acoustic effects. A preliminary geotechnical analysis has revealed that this destructive effect was caused by the nearby construction works, namely construction of a fishing...
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Mechanochemical Energy Transduction during the Main Rotary Step in the Synthesis Cycle of F1-ATPase
PublicationF1-ATPase is a highly efficient molecular motor that can synthesize ATP driven by a mechanical torque. Its ability to function reversibly in either direction requires tight mechanochemical coupling between the catalytic domain and the rotating central shaft, as well as temporal control of substrate binding and product release. Despite great efforts and significant progress, the molecular details of this synchronized and fine-tuned...
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Unusual Influence of Fluorinated Anions on the Stretching Vibrations of Liquid Water
PublicationInfrared (IR) spectroscopy is a commonly used and invaluable tool in the studies of solvation phenomena in aqueous solutions. Concurrently, ab initio molecular dynamics (AIMD) simulations deliver the solvation shell picture at a molecular detail level and allow for a consistent decomposition of the theoretical IR spectrum into underlying spatial correlations. Here, we demonstrate how the novel spectral decomposition techniques...
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Safety assessment of a concrete viaduct damaged by vehicle impact and an evaluation of the repair
PublicationDamage to lower parts of viaducts caused by impact from under-passing high vehicles is relatively frequent. One such incident, in which a viaduct was damaged by the impact from a truck with an improperly assembled hydraulic crane, is considered in this work. The analysis is based on a detailed object damage evaluation, 3D laser scanning, and numerical simulations. The aim of the study is to accurately model the vehicle impact into...
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METHOD FOR SHIP'S ROLLING PERIOD PREDICTION WITH REGARD TO NON-LINEARITY OF GZ CURVE
PublicationThe paper deals with the problem of prediction of the rolling period. A special emphasis is put on the practical application of the new method for rolling period prediction with regard to non-linearity of the GZ curve. The one degree-of-freedom rolling equation is applied with using the non-linear stiffness moment and linear damping moment formulas. A number of ships are considered to research the discrepancies between the pending...
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Assessing the time effectiveness of trust management in fully synchronised wireless sensor networks
PublicationThe paper presents the results of the time effectiveness assessment of the distributed WSN Cooperative Trust Management Method - WCT2M in a fully synchronized Wireless Sensor Network (WSN). First we introduce some basic types of synchronization patterns in WSN based on the idea of sleep scheduling. Then we explain how WCT2M works in the network applying the fully synchronized sleep scheduling pattern. Such networks were subjected...
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Design of microstrip antenna subarrays: a simulation-driven surrogate-based approach
PublicationA methodology for computationally efficient simulation-driven design of microstrip antenna subarrays is presented. Our approach takes into account the effect of the feed (here, a corporate network) on the subarray side-lobe level and allows adjustment of both radiation and reflection responses of the structure under design within a single automated process. This process is realized as surrogate-based optimization that produces...
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Trawl-Door Shape Optimization with 3D CFD Models and Local Surrogates
PublicationDesign and optimization of trawl-doors are key factors in minimizing the fuel consumption of fishing vessels. This paper discusses optimization of the trawl-door shapes using high-fidelity 3D computational fluid dynamic (CFD) models. The accurate 3D CFD models are computationally expensive and, therefore, the direct use of traditional optimization algorithms, which often require a large number of evaluations, may be prohibitive....
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The behavioural model of graphene field-effect transistor
PublicationThe behavioural model of a graphene field-effect transistor (GFET) is proposed. In this approach the GFET element is treated as a “black box” with only external terminals available and without considering the physical phenomena directly. The presented circuit model was constructed to reflect steady-states characteristics taking also into account GFET capacitances. The authors’ model is defined by a relatively small number of equations...
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LLA : A New Anypath Routing Scheme Providing Long Path Lifetime in VANETs
PublicationVehicular ad-hoc networks (VANETs) are a promising solution to improve the road traffic safety, reduce the environmental pollution, or simply provide the on-board infotainment services. However, these actions are often not possible due to high mobility of vehicles causing frequent failures of VANET links. In this paper, we focus on anypath routing to improve the reliability of multihop VANET communications. In particular, the paper...
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Lax-Wendroff and McCormack Schemes for Numerical Simulation of Unsteady Gradually and Rapidly Varied Open Channel Flow
PublicationTwo explicit schemes of the finite difference method are presented and analyzed in the paper. The applicability of the Lax-Wendroff and McCormack schemes for modeling unsteady rapidly and gradually varied open channel flow is investigated. For simulation of the transcritical flow the original and improved McCormack scheme is used. The schemes are used for numerical solution of one dimensional Saint-Venant equations describing free...
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Simulation-Driven Design of Microstrip Antenna Subarrays
PublicationA methodology for computationally efficient simulation-driven design of microstrip antenna subarrays is presented. Our approach takes into account the effect of the feed (e.g., a corporate network) on the subarray side lobe level and allows adjusting both radiation and reflection responses of the structure under design within a single automated process. This process is realized as surrogate-based optimization that produces designs...
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Smooth Particle Hydrodynamics (SPH) approach in simulating large penetration into soil
PublicationA study of Smooth Particle Hydrodynamics (SPH) approach for predicting large soil deformation is presented. Theoretical basics of SPH method, including the equations governing, discussion of the importance of smoothing function length, contact formulation, boundary treatment and finally utilization in hydrocodes simulations are presented. An application of SPH to a real case of large penetrations (crater creating) into soil caused...
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Rapid multi-objective simulation-driven design of compact microwave circuits
PublicationA methodology for rapid multi-objective design of compact microwave circuits is proposed. Our approach exploits point-by-point Pareto set identification using surrogate-based optimization techniques, auxiliary equivalent circuit models, and space mapping as the major model correction method. The proposed technique is illustrated and validated through the design of a compact rat-race coupler. A set of ten designs being trade-offs...
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DETECTION OF DEBONDING IN STEEL BARS EMBEDDED IN CONCRETE USING GUIDED WAVE PROPAGATION
PublicationThe paper presents a non-destructive diagnostic technique based on guided wave propagation phenomenon used to assess the adhesive bonding between a steel bar and a concrete cover. Double-layered cylindrical specimens with different levels of debonding and its location were investigated. The influence of bonding length on the excitation of multiple modes of longitudinal guided waves was analysed. Numerical simulations of guided...
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Numerical modeling of GPR field in damage detection of a reinforced concrete footbridge
PublicationThe paper presents a study on the use of the ground penetrating radar (GPR) method in diagnostics of a footbridge. It contains experimental investigations and numerical analyses of the electromagnetic field propagation using the finite difference time domain method (FDTD). The object of research was a reinforced concrete footbridge over a railway line. The calculations of the GPR field propagation were performed on a selected cross-section...
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A Compact and Lightweight Microwave Tilt Sensor Based on an SRR-Loaded Microstrip Line
PublicationIn this paper, the symmetry property of split ring resonators (SRRs) is exploited to develop a tilt sensor. The sensor is composed of an SRR-loaded microstrip line operating at microwave frequencies. It is shown that the depth of notch in the reflection characteristic of the microstrip is a function of the tilt angle of the SRR. Thus, it can be used for sensing inclination. The sensor benefits from very compact size and light weight....
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DNAffinity: a machine-learning approach to predict DNA binding affinities of transcription factors
PublicationWe present a physics-based machine learning approach to predict in vitro transcription factor binding affinities from structural and mechanical DNA properties directly derived from atomistic molecular dynamics simulations. The method is able to predict affinities obtained with techniques as different as uPBM, gcPBM and HT-SELEX with an excellent performance, much better than existing algorithms. Due to its nature, the method can...
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Wind Conditions in Urban Layout – Numerical and Experimental Research
PublicationThis paper presents research which compares the numerical and the experimental results for different cases of airflow around a few urban layouts. The study is concerned mostly with the analysis of parameters, such as pressure and velocity fields, which are essential in the building industry. Numerical simulations have been performed by the commercial software Fluent, with the use of a few different turbulence models, including...
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Electromagnetic plane wave scattering from a cylindrical object with an arbitrary cross section using a hybrid technique
PublicationA hybrid technique combining finite-element and mode-matching methods for the analysis of scattering problems in open and closed areas is presented. The main idea of the analysis is based on the utilization of the finite-element method to calculate the post impedance matrix and combine it with external excitation. The discrete analysis, which is the most time- and memory-consuming, is limited here only to the close proximity of...
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Assessment of Road Restraint Systems in Polish Conditions
PublicationKey to understanding the needs and tools of road infrastructure management is identifying the hazards and their sources involved in having no or faulty road restraint systems. Clarity is also needed on why the systems are wrongly designed, constructed, built and operated. To ensure that the problem is adequately understood, research and site observations were conducted and...
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A two dimensional approach for modelling of pennate muscle behaviour
PublicationThe purpose of this study was to elaborate a two-dimensional approach for unipennate and bipennate striated skeletal muscle modelling. Behavior of chosen flat pennate muscle is modelled as a rheological system composed of serially linked passive and active fragments having different mechanical properties. Each fragment is composed of three elements: mass element, elastic element and viscous element. Each active fragment furthermore...
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Efficient synthesis and antifungal investigation of nucleosides’ quaternary ammonium salt derivatives
PublicationQuaternary ammonium salts are a group of compounds with diverse biological properties, the most important of which are their antiviral, antibacterial, and antifungal activities. The quaternization reactions of 5'-O-tosyl derivatives of uridine and thymidine with triethylamine, trimethylamine, 4-(N ,N -dimethylamino)pyridine, 2-methylpyridine, and pyridine are described in this article. Two of the synthesized compounds are exceptional...
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EXPERIMENTAL AND NUMERICAL VALIDATION OF THE IMPROVED VORTEX METHOD APPLIED TO CP745 MARINE PROPELLER MODEL
PublicationThe article presents a numerical analysis of the CP745 marine propeller model by means of the improved vortex method and CFD simulations. Both numerical approaches are validated experimentally by comparing with open water characteristics of the propeller. The introduced modification of the vortex method couples the lifting surface approach for the propeller blades and the boundary element method for the hub. What is more, a...
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Analysis of impact of audio modifications on the robustness of watermark for non-blind architecture
PublicationThe aim of this paper is to assess the robustness of the non-blind audio content watermarking scheme proposed by the authors. The authors present the architecture of the designed system along with the employed workflows for embedding and extracting the watermark followed by the implementation phase description and the analysis of the experimental results. Some possible attack simulations on the embedded watermarks are reviewed,...
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Modeling and Simulation for Exploring Power/Time Trade-off of Parallel Deep Neural Network Training
PublicationIn the paper we tackle bi-objective execution time and power consumption optimization problem concerning execution of parallel applications. We propose using a discrete-event simulation environment for exploring this power/time trade-off in the form of a Pareto front. The solution is verified by a case study based on a real deep neural network training application for automatic speech recognition. A simulation lasting over 2 hours...
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Modeling of light propagation in canine gingiva
PublicationThis study is a preliminary evaluation of the effectivenes of laser-based surgery of maxillary and mandibular bone in dogs. Current methods of gingivial surgery in dogs require the use of general anaesthesia.1, 2 The proposed methods of laser surgery can be performed on conscious dogs, which substantially reduces the associated risks. Two choices of lasers, Nd:YAG and a 930 nm semiconductor lasers were evaluated. The former is...
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Zastosowanie metody galwanostatycznej do wyznaczania błędu fazy elektrod woltamperometrycznych
PublicationW pracy przeanalizowano właściwości metrologiczne elektrod woltamperometrycznych w dziedzinie częstotliwości. Wykazano, że w przypadku, gdy reakcja elektrochemiczna kontrolowana jest procesem transportu jonów, elektroda woltamperometryczna zachowuje się tak jak przetwornik pomiarowy I rzędu. Jej właściwości metrologiczne opisane są przez czułość, częstotliwość graniczną, błąd amplitudy i błąd fazy. Przeprowadzona analiza pokazała,...
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Analiza wydajności kolektora słonecznego przeznaczonego dla systemu ogrzewania budynku o niskim zapotrzebowaniu na ciepło
PublicationNiniejsza praca przedstawia wyniki badań numerycznych kolektora słonecznego, przeznaczonego dla budynków o niskim zapotrzebowaniu na ciepło. W pracy przedstawiono nowatorską koncepcję kolektora słonecznego o obniżonej wydajności, niskich kosztach wykonania oraz wykorzystującego istniejące elementy konstrukcji przekryć budynku. Istotną zaletą kolektora jest brak ingerencji w architekturę zewnętrzną budynku. Za pomocą symulacji numerycznej...
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Revealing the Frank–Evans “Iceberg” Structures within the Solvation Layer around Hydrophobic Solutes
PublicationUsing computer simulations, the structural properties of solvation water of three model hydrophobic molecules, methane and two fullerenes (C60 and C80), were studied. Systems were simulated at temperatures in the range of 250−298 K. By analyzing both the local ordering of the molecules of water in the solvation layers and the structure of hydrogen bond network, it is shown that in the solvation layer of hydrophobic molecules, ordered...
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Performance of LSP preemption methods in different MPLS networks
PublicationPreemption in Multiprotocol Label Switching (MPLS) is an optional traffic engineering technique used to create a new path of high priority when there is not enough bandwidth available. In such case the path is admitted by removing one or more previously allocated paths of lower priority. As there are usually many possible sets of low priority paths which can be selected, a preemption algorithm is being started to select the best...
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SIMULATION MODEL OF ASON/GMPLS ARCHITECTURE
PublicationGrowing demands of information society concerned with sophisticated applications could be satisfied by ASON/GMPLS architecture comprehended as Automatically Switched Optical Network (ASON) with Generalized Multi-Protocol Label Switching (GMPLS). The ASON/GMPLS proposition represents the future direction of Next Generation Network (NGN) architecture. Therefore considerable work has to be done to examine this solution. In this aspect...
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SafeCity – a GIS-based tool profiled for supporting decision making in urban development and infrastructure protection
PublicationThis paper presents a system for analysis of municipal Critical Infrastructures, which offers integrated tools for target analysis, hazard scenario simulations and spatial analysis within a remotely accessible Web-based Geographic Information System. The system has been applied to research conducted in the city of Gdansk with the aid of blast attack, chemical leakage and flood hazard scenarios, as well as a spatial density algorithm,...
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Sensorless induction motor drive with voltage inverter and sine-wave filter
PublicationThis paper presents a speed sensorless control system of an induction motor with an output LC filter. It is known that the parameters design of the filter gives sine wave motor supply voltage but complicates control and estimation process. The reason is that the voltage drop and phase shift between filter input and output signals are imposed, and hence the motor voltages and currents differ from the inverter output waveforms. To...
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Macro-elements and Model Order Reduction for Efficient Three-Dimensional FEM Analysis
PublicationAn efficient model order reduction (MOR) methodology for three dimensional vector finite element method (FEM) is developed to accelerate simulations of the structures containing features that cause strong variations of mesh density. As the result of presented algorithm, FEM subsystems of equations corresponding to the selected refined region are converted into a very compact sets of linear equations, called macro-elements.Numerical...
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Unraveling Energy Transfer and Fluorescence Quenching Dynamics in Biomolecular Complexes: A Comprehensive Study of Imiquimod-Rifampicin Interaction.
PublicationIn nature, numerous biomolecules are implicated in charge transfer (CT) and energy transfer (ET) mechanisms crucial for fundamental processes such as photosynthesis. Unveiling these mechanisms is pertinent to multiple disciplines including chemistry, engineering and biochemistry. This letter presents a study involving two molecules forming a model system with efficient ET properties. Specifically, their complex exhibits dark quenching...
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Mutual Clutter Suppression Techniques for FM Sonars
PublicationThe article presents methods that help in the elimination of mutual clutter as well as the consequences of two FM sounding signal sonars operating in the same body of water and frequency band. An in-depth analysis of mutual clutter was carried out. The effects of sounding signal differentiation were determined, as was the Doppler effect on mutual clutter suppression. One of the methods analysed is of particular interest in a situation...
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Continuous wave sonar with hyperbolic frequency modulation keyed by pseudo-random sequence
PublicationA CW FM type sounding signal is used in the classical solution of silent sonar. While the signal provides a relatively simple implementation of digital signal processing, and ensures good detection conditions, unfortunately, in the presence of the Doppler effect, distance measurement results tend to be wrong. This is due to the fact that the received signal’s instantaneous frequency value is dependent both on the distance to the...
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Secondary arc modelling for single pole reclosing analyses
PublicationThe paper discusses two evaluation methods of single pole auto-reclosing process effectiveness in HV transmission lines. Secondary arc current and recovery voltage calculation results obtained by load flow calculation are compared to the results obtained by the time domain simulations. Moreover, a nonlinear secondary arc model implementation is presented. The paper presents the study results for the three types of EHV transmission...
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A Comparative Numerical Simulation Study of Turbulent Non-premixed CO/H2/N2 Syngas Jet Flames
PublicationIn the present work, numerical simulations of turbulent non-premixed syngas flame have been performed in Reynolds-Averaged Naver-Stokes turbulence approach using four turbulence-chemistry interaction models. To this aim, we used assumed beta PDF approach, Steady Laminar Flamelet model, Eddy Dissipation Concept and Partially Stirred Reactor model. Numerical results are compared and analysed with respect to two experiments from the...
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Molecular dynamics and verisimilitude - to what extent can one trust a computational simulation?
PublicationFor the last several tens of years, computer simulations have become of undeniable importance. Molecular Dynamics (MD) simulation techniques are used to examine the phenomena which occur at the level that cannot be observed directly. Thus, they can be successfully exploited in many different scientific fields such as: materials science, applied mathematics and theoretical physics, biochemistry, biophysics or drug design. Despite...
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Nested Kriging Surrogates for Rapid Multi-Objective Optimization of Compact Microwave Components
PublicationA procedure for rapid EM-based multi-objective optimization of compact microwave components is presented. Our methodology employs a recently developed nested kriging modelling to identify the search space region containing the Pareto-optimal designs, and to construct a fast surrogate model. The latter permits determination of the initial Pareto set, further refined using a separate surrogate-assisted process. As an illustration,...
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Mechanical properties of Precontraint 1202S coated fabric under biaxial tensile test with different load ratios
PublicationThe paper describes a method of laboratory tests necessary for identifying the mechanical properties of polyester coated fabrics named Precontraint 1202S with PVDF surface treatment. Two sets of initial material parameters for dense net model and orthotropic model are specified. Material parameters for Precontraint 1202S coated fabric are specified on the basis of the biaxial tensile tests for different load ratios. In order to...