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Search results for: TREE SAPS
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Comparing phylogenetic trees using a minimum weight perfect matching
PublicationA phylogenetic tree represents historical evolutionary relationshipbetween different species or organisms. There are various methods for reconstructing phylogenetic trees.Applying those techniques usually results in different treesfor the same input data. An important problem is to determinehow distant two trees reconstructed in such a wayare from each other. Comparing phylogenetic trees is alsouseful in mining phylogenetic information...
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Investigation of multilayer three-strip coplanar lines with the ferrite material
PublicationW artykule opisano wyniki badań przeprowadzonych nad wielowarstwową linią koplanarną zawierającą trzy paski umieszczone na podłużnie magnesowanym ferrycie. Analiza opiera się o metodę rodzajów sprzężonych. Uzyskane rezultaty zostały zweryfikowane eksperymentalnie.
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Lexicalisation of vertical motion: A study of three satellite-framed languages
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The quantum free energy barrier for hydrogen vacancy diffusion in Na3AlH6
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Three-dimensional representation of geographic data in a Web-based GIS
PublicationPresenting geographic data in a web environment has been a long standing problem. For many years the low performance of web browsers has limited the visualization of spatial data to only two dimensions. More recently, the introduction of open standards for 3D acceleration of web applications sparked the emergence of new methods of presenting three-dimensional data in a web browser without using third-party extensions. However,...
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Design and modeling of the piezoelectric motor based on three resonance actuators
PublicationThis paper describes a piezoelectric motor which combines advantages from two existing piezoelectric motors topologies. The research work presents the design, simulations and measurements of the piezoelectric motor with three rotation-mode actuators. The aim of the project was to obtain the high speed piezoelectric motor. Other advantages of this conception are blocking torque, short response times, the ability to work in a hostile...
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Inhibition of the granular anammox process by the high concentration of free ammonia.
PublicationHigh concentrations of ammonia and nitrite, typical for reject water treatment in the anammox process with the use of high temperatures and pH, may cause free ammonia (FA) inhibition. In this study, the inhibitory effect of FA on anammox process rate was investigated in a bench-scale sequencing batch reactor (SBR) with granular anammox biomass. Results of the study present that the anammox process could be successfully operated...
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Modulated crystal structures - periodicity in more than three dimensions
PublicationThe initial definition of a crystal was that it is an object with flat faces. When diffraction studies were developed it turned out that crystal consists of a highly ordered particles and it is possible to isolate a small unique part of their structure - a unit cell - and the definition has been changed to rely on this fact. Nowadays by a crystal we mean any solid having an essentially discrete diffraction diagram. It is because...
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On trees with equal domination and total outer-independent domination numbers
PublicationFor a graph G=(V,E), a subset D subseteq V(G) is a dominating set if every vertex of V(G)D has a neighbor in D, while it is a total outer-independent dominating set if every vertex of G has a neighbor in D, and the set V(G)D is independent. The domination (total outer-independent domination, respectively) number of G is the minimum cardinality of a dominating (total outer-independent dominating, respectively) set of G. We characterize...
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A proposition for integrating elements of game universe by means of behavioral trees
PublicationModern computer games often involve autonomous beings collaborating and competing with each other to reach their objectives in the game universe. It seems only natural to use agent-oriented approach in such cases. This article identifies the rules of building a game universe as an environment for executing agents. The paper also covers a method for decomposing compound behaviors into behavioral trees. Dividing complex behaviors...
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Three-Level Z-Source Neutral-Point-Clamped Inverter
PublicationThe paper describes construction and the principles of activity, attributes and potential of 3-phase Z-type inverters. The paper focuses on the basic system and suggested 3-level system of a NPC type Z-inverter, which was elaborated by authors. Simplified theoretical analysis of both systems has been verified by detailed simulation research. In the last section of the article, the possibility to build multilevel Z- inverters based...
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Processing of Hydroacoustic and LiDAR Data for Three-dimensional Surface Reconstruction
PublicationThe technologies of sonar and laser scanning are commonly used for obtaining spatial information about underwater and over ground environments in the form of point clouds. Since this data model has known disadvantages, a more practical solution of visualising such data involves the creation of solid three-dimensional meshes composed of edges and facets. In this paper, several methods for 3D shape reconstruction of data obtained...
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Treatment of landfill leachate by constructed wetlands: three case studies
PublicationThe performance of three CW systems treating landfill leachate, two located in northern Poland (Szadółki near Gdańsk and Gatka near Miastko) and one in southern Sweden (Örebro), is discussed. The CWs differ in size, hydraulic regime, type of hydrophytic plants and type of leachate pre-treatment before discharging to the CW. The CW in Szadółki consists of two parallel beds with sub-surface, horizontal flow of leachate (HSSF) planted...
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Ranking ecosystem services delivered by trees in urban and rural areas
PublicationPolicies and strategies for tree management and protection on a national, regional, and local level have not sufficiently considered differences between rural and urban areas. We used expert knowledge to compare rural and urban areas in a case study evaluating the relative importance of ecosystem services (ES) in policy development. The Analytic Hierarchy Process (AHP) and focus group discussions were used to rank 17 ES, representing...
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Design of three control algorithms for an averaging tank with variable filing
PublicationAn averaging tank with variable filling is a nonlinear multidimensional system and can thus be considered a complex control sys-tem. General control objectives of such object include ensuring stability, zero steady state error and achieving simultaneously shortest possible settling time and minimal overshoot. The main purpose of this research work was the modelling and synthesis of three control systems for an averaging tank. In...
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On the differential effect of temperature on the Nusselt-Rayleigh relationship in free convection
PublicationThe aim of and inspiration behind this paper was to explain the reasons, also observed by other researchers, of the discrepancy in the results of experimental free convection, which for small Rayleigh and Nusselt numbers in the initial phase of research can sometimes reach several hundred percent. These discrepancies decrease with increasing heating power and plate surface temperature, in proportion to the increase in Ra and Nu,...
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Sensorless predictive control of three-phase parallel active filter
PublicationThe paper presents the control system of parallel active power filter (APF) with predictive reference current calculation and model based predictive current control. The novel estimator and predictor of grid emf is proposed for AC voltage sensorless operation of APF, regardless of distortion of this voltage. Proposed control system provides control of APF current with high precision and dynamics limited only by filter circuit parameters....
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Diamond investments – Is the market free from multiple price bubbles?
PublicationThe following study aims to investigate whether multiple price bubbles, in which the quoted market price of diamonds significantly deviates from their fundamental value, exist in the diamond market. It was conducted using ADF, SADF and GSADF tests, with the latter found to be an optimal form of evaluating the analysed issue. The presented results support the conclusion that the diamond market is not free from periods defined as...
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Comparison of three methods of EPR retrospective dosimetry in watch glass
PublicationIn this article we present results of our follow-up studies of samples of watch glass obtained and examined within a framework of international intercomparison dosimetry project RENEB ILC 2021. We present three methods of dose reconstruction based on EPR measurements of these samples: calibration method (CM), added dose method (ADM) and added dose&heating method (ADHM). The study showed that the three methods of dose reconstruction...
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Three-dimensional Weyl topology in one-dimensional photonic structures
PublicationTopological features, in particular distinct band intersections known as nodal rings, usually requiring three-dimensional structures, have now been demonstrated experimentally in an elegantly simple one-dimensional photonic crystal.
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Free-air anomaly grid on the Gulf of Gdańsk
Open Research DataWe present an attempt to determine the accuracy of shipborne gravimetry for the needs of geoid determination. The shipborne gravity campaign, is the beginning of a series of gravimetry measurements in the Polish Exclusive Economy Zone. The campaign was conducted in the area where the accuracy of geoid determination is crucial for the safety of navigation...
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EEG data recorded in three mental states
Open Research DataElectroencephalographic (EEG) signals were acquired from 17 (14 males, 3 females) participants aged between 20 and 30 years.
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The Scanning Electron Microscopy images of three arthropods
Open Research DataThe dataset contains micrographs of various arthropods made with the Scanning Electron Microscopy (SEM) technique. The images were done during the laboratory with students from the Faculty of Chemistry. Among the studied species, there is a fruit fly (lat.Drosophila melanogaster), a spider (most likely Sibianor aurocinctus), and a weevil insect (Curculionoidea).
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Expression-based decision tree model reveals distinct microRNA expression pattern in pediatric neuronal and mixed neuronal-glial tumors
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A Revised Approach to Flood Damage Estimation in Flood Risk Maps and Flood Risk Management Plans, Poland
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Mental Health Impact of SARS-COV-2 Pandemic on Long-Term Care Facility Personnel in Poland
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t-SNE Highlights Phylogenetic and Temporal Patterns of SARS-CoV-2 Spike and Nucleocapsid Protein Evolution
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SAXS examination of the water evaporation process from silica materials coated with a polysaccharide–polyimine copolymer layer
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A Simple Model of Linkage Disequilibrium and Genetic Drift in Human Genomic SNPs: Importance of Demography and SNP Age
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In silico assessment and sonochemical synthesis of 2-alkynyl 3-chloropyrazines as prospective ligands for SARS-CoV-2
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An algorithmic approach to estimating the minimal number of periodic points for smooth self-maps of simply-connected manifolds
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Highly Conserved Homotrimer Cavity Formed by the SARS-CoV-2 Spike Glycoprotein: A Novel Binding Site
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Chosen single nucleotide polymorphisms (SNPs) of enamel formation genes and dental caries in a population of Polish children
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t-SNE Highlights Phylogenetic and Temporal Patterns of SARS-CoV-2 Spike and Nucleocapsid Protein Evolution
PublicationWe propose applying t-distributed stochastic neighbor embedding to protein sequences of SARS-CoV-2 to construct, visualize and study the evolutionary space of the coronavirus. The basic idea is to explore the COVID-19 evolution space by using modern manifold learning techniques applied to evolutionary distances between variants. Evolutionary distances have been calculated based on the structures of the nucleocapsid and spike proteins.
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Self-organising maps in the analysis of strains of human abdominal wall to identify areas of similar mechanical behaviour.
PublicationThe study refers to the application of a type of artificial neural network called the Self-Organising Map (SOM) for the identification of areas of the human abdominal wall that behave in a similar mechanical way. The research is based on data acquired during in vivo tests using the digital image correlation technique (DIC). The mechanical behaviour of the human abdominal wall is analysed during changing intra-abdominal pressure....
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Electronic circular dichroism imaging (CDi) maps local aggregation modes in thin films of chiral oligothiophenes
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Changes in Eating Behaviour during SARS-CoV-2 Pandemic among the Inhabitants of Five European Countries
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Novel approach to ecotoxicological risk assessment of sediments cores around the shipwreck by the use of self-organizing maps
PublicationMarine and coastal pollution plays an increasingly important role due to recent severe accidents which drew attention to the consequences of oil spills causing widespread devastation of marine ecosystems. All these problems cannot be solved without conducting environmental studies in the area of possible oil spill and performing chemometric evaluation of the data obtained looking for similar patterns among pollutants and optimize...
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A policy view: gaps and weaknesses of substitution between biological products in law and economics dimension: the example of insulin
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An algorithmic approach to estimating the minimal number of periodic points for smooth self-maps of simply-connected manifolds
PublicationFor a given self-map f of M, a closed smooth connected and simply-connected manifold of dimension m 4, we provide an algorithm for estimating the values of the topological invariant D^m_r [f], which equals the minimal number of r-periodic points in the smooth homotopy class of f. Our results are based on the combinatorial scheme for computing D^m_r [f] introduced by G. Graff and J. Jezierski [J. Fixed Point Theory Appl. 13 (2013),...
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Minimal number of periodic points for smooth self-maps of two-holed 3-dimensional closed ball
PublicationDla ciągłego odwzorowania f przestrzeni określonej w tytule w siebie, które posiada rzeczywiste wartości własne na drugiej grupie homologii, wyznaczona została minimalna liczba punktów r-periodycznych w klasie wszystkich gładkich odwzorowań homotopijnych z f.
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Estimation of the minimal number of periodic points for smooth self-maps of odd dimensional real projective spaces
PublicationLet f be a smooth self-map of a closed connected manifold of dimension m⩾3. The authors introduced in [G. Graff, J. Jezierski, Minimizing the number of periodic points for smooth maps. Non-simply connected case, Topology Appl. 158 (3) (2011) 276-290] the topological invariant NJD_r[f], where r is a fixed natural number, which is equal to the minimal number of r-periodic points in the smooth homotopy class of f. In this paper smooth...
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Combinatorial scheme of finding minimal number of periodic points for smooth self-maps of simply connected manifolds
PublicationLet M be a closed smooth connected and simply connected manifold of dimension m at least 3, and let r be a fixed natural number. The topological invariant D^m_r [f], defined by the authors in [Forum Math. 21 (2009), 491-509], is equal to the minimal number of r-periodic points in the smooth homotopy class of f, a given self-map of M. In this paper, we present a general combinatorial scheme of computing D^m_r [f] for arbitrary dimension...
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Highly Conserved Homotrimer Cavity Formed by the SARS-CoV-2 Spike Glycoprotein: A Novel Binding Site
PublicationAn important stage in severe acute respiratory syndrome coronavirus 2 (SARS-CoV-2) life cycle is the binding of the spike (S) protein to the angiotensin converting enzyme-2 (ACE2) host cell receptor. Therefore, to explore conserved features in spike protein dynamics and to identify potentially novel regions for drugging, we measured spike protein variability derived from 791 viral genomes and studied its properties by molecular...
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Computations of the least number of periodic points of smooth boundary-preserving self-maps of simply-connected manifolds
PublicationLet $r$ be an odd natural number, $M$ a compact simply-connected smooth manifold, $\dim M\geq 4$, such that its boundary $\partial M$ is also simply-connected. We consider $f$, a $C^1$ self-maps of $M$, preserving $\partial M$. In [G. Graff and J. Jezierski, Geom. Dedicata 187 (2017), 241-258] the smooth Nielsen type periodic number $D_r(f;M,\partial M)$ was defined and proved to be equal to the minimal number of $r$-periodic points...
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In silico assessment and sonochemical synthesis of 2-alkynyl 3-chloropyrazines as prospective ligands for SARS-CoV-2
PublicationThe recent global pandemic caused by COVID-19 has triggered an intense effort worldwide towards the development of an effective cure for this disease. In our effort we have explored the 2-alkynyl substituted 3-chloropyrazine framework as a potential template for the design of molecules for this purpose. Our strategy was supported by the in silico studies of representative compounds to assess their binding affinities via docking...
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Cu( II ) ions removal from wastewater using starch nanoparticles ( SNPs ): An Eco‐sustainable approach
PublicationThe complex structured starch particles were reduced to the nanoscale size range through hydrolysis utilizing low concentration acid assisted with ultrasound irradiation. The synthesized starch nanoparticles (SNPs) were characterized by TEM, FTIR, and XRD techniques. The synthesized SNPs possessed surface activated entities, as many cationic functional groups were confirmed through the FTIR spectrum. Also, these SNPs were effectively...
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Wojciech Litwin dr hab. inż.
People1992÷1996 - study on Mechanical Department at Gdansk University of Technology1996 – employed in the Faculty of Ocean Engineering and Ship Technology at the Gdansk University of Technology2004 – PhD2014 – habilitation2016 - vice dean for science at Faculty of Ocean Engineering2020 - dean of the Faculty of Ocean Engineering2021 - head of Institute of Naval Architecture He participated in a number of designing and research programs...
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Milky Sap of Greater Celandine (Chelidonium majus L.) and Anti-Viral Properties
PublicationThe milky juice of the greater celandine herb has been used in folk medicine and in homeopathy for treatment of viral warts for years. However, classical medicine fails to use properties of celandine herbs in treatment of diseases induced by papilloma viruses. Nevertheless, dermatological outpatient clinics are regularly visited by patients reporting efficacy of milky sap isolated from celandine herb in treatment of their own...
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An investigation of microstructural basis for corrosion behavior of Al-CNT composites fabricated by SPS
PublicationIn this research effect of the addition of multi-wall carbon nanotubes (MWCNTs) as additive powder on microstructure and corrosion behavior of fabricated Al-CNT composites was studied. The aluminum powder and CNTs were mixed with high energy planetary ball-mill. It is observed that by increasing milling time, the uniformity of CNTs on aluminum matrix and consequently corrosion resistance of Al-CNT composite is increased. On the...