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DNAffinity: a machine-learning approach to predict DNA binding affinities of transcription factors
PublikacjaWe present a physics-based machine learning approach to predict in vitro transcription factor binding affinities from structural and mechanical DNA properties directly derived from atomistic molecular dynamics simulations. The method is able to predict affinities obtained with techniques as different as uPBM, gcPBM and HT-SELEX with an excellent performance, much better than existing algorithms. Due to its nature, the method can...
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Implementation of Business Processes in Smart Cities Technology
PublikacjaThe goal of the paper is to present the results of studies concerning the development of a method of implementation of business processes in Smart Cities systems. The method has been developed during studies carried out within the building of a Smart Cities system for Gdańsk, and is based on basic development project management mechanisms (drawing from best practices, and in particular from the RUP methodology) and business-oriented...
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Lung perfusion parameters in the diagnosis of diabetic pulmonary microangiopathy
PublikacjaThis paper presents the role of perfusion computed tomography (pCT) in the diagnosis of diabetic pulmonary microangiopathy. Our previous works have shown that perfusion parameters are useful in the diagnosis of diabetic pulmonary microangiopathy. In this article we focus on conditions that are necessary for such the diagnosis and introduce method of classification no microangiopathy vs. microangiopathy based on logistic regression....
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Awareness evaluation of patients in vegetative state employing eye-gaze tracking system
PublikacjaApplication of eye-gaze tracking system to awareness evaluation is demonstrated. Hitherto awareness evaluation methods are presented. The assumptions of proposed method based on analysis of visual activity of patients in vegetative state are demonstrated. The eye-gaze tracking system ''Cyber-Eye'' developed at the Multimedia Systems Department employed to conducted experiments is presented. Research described in the paper indicates...
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Determining the leakage current resistive component by the orthogonal vector method
PublikacjaThe measurement of the metal – oxide surge arresters (MOSA) leakage current and the analysis of its components is a key diagnostic criterion according to technical standards. During on site MOSA condition assessment, the easy way is based on the measurement only leakage current, without the inconvenient live working measurements of supply voltage. Orthogonal vectors method of determination the resistive leakage current is presented....
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Application of mesh deformation for modeling of conformal RF components with 3D FEM
PublikacjaIn this paper, a method of analysis of conformal RF components has been proposed. In this approach, modeling of a curved structure is based on mesh deformation of planar objects rather than the construction of conformal geometry at CSG level. Since the model is represented as a 3D mesh, the deformation only requires the calculation of nodes position in the bent structure. The results of the proposed algorithm have been validated...
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Experimental and theoretical study of a vertical tube in shell storage unit with biodegradable PCM for low temperature thermal energy storage applications
PublikacjaThis article presents the experimental investigations of the coconut oil-based TES module for HVAC applications in the ambient and-sub ambient temperature range. To properly study this problem modular experimental module and test loop were developed. Special attention has been paid to study the physical mechanism of the melting/solidification process for natural substance (coconut oil) which has perspectives to be used in thermal...
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Developing a Framework for the Implementation of Landscape and Greenspace Indicators in Sustainable Urban Planning. Waterfront Landscape Management: Case Studies in Gdańsk, Poznań and Bristol
PublikacjaUrban landscape (UL) management and urban greenspace (UG) delivery require effective planning tools. The aim of the study is to develop a conceptual framework for the implementation of ecological, structural and visual landscape and greenspace indicators (LGI) in spatial development of urban areas. The UL and UG management provisions in Poland are identified at various levels of urban planning (local, municipal and regional). Furthermore,...
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Advanced oxidation processes (AOPs) based wastewater treatment - unexpected nitration side reactions - a serious environmental issue: A review
PublikacjaChemical compounds containing nitro group (nitro-products) are a one of toxic by-products, that can be formed during wastewater treatment processes. In case of presence of nitrite or nitrate ions, the formation of nitro-products during advanced oxidation processes (AOPs) is very common. It is caused by the reactive nitrogen species (RNs) such as nitrate radical (NO3•), nitrite radical (NO2•), nitrogen oxide radical (NO•) and peroxynirite...
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Marine traffic risk modelling – an innovative approach and a case study
PublikacjaThis paper presents a model to analyse the risk of two common marine accidents: collision and grounding. Attention is focused on oil tankers since they pose the highest environmental risks. A case study in selected areas of the Gulf of Finland in ice-free conditions is presented. The model utilizes a formula for risk calculation that considers both the probability of an unwanted event and its consequences. The model can be decomposed...
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Multifaceted Analyses of Four Different Prototype Lightweight Photovoltaic Modules of Novel Structure
PublikacjaDynamic growth of photovoltaic capacity in Poland encourages many entities to invest in photovoltaic systems. However, in the case of buildings with low roof-bearing capacity it can be problematic or even impossible to mount conventional PV modules due to their relatively high weight. Hence, the use of lightweight PV modules is a potential solution. In this paper four different prototype silicon lightweight modules of novel structure...
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Changes in the Global Competitiveness Index 4.0 Methodology: The Improved Approach of Competitiveness Benchmarking
PublikacjaThe Global Competitiveness Index (GCI) developed by the World Economic Forum (WEF) is used as a standard for measuring a country’s competitiveness. However, in literature, the GCI has been accused of numerous methodological flaws. Consequently, in 2018, the WEF introduced significant methodological changes. This study aims to examine whether the methodological modifications in the GCI’s structure increase its ability to capture...
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Quaternion Encryption Method for Image and Video Transmission
PublikacjaQuaternions are hyper-complex numbers of rank 4. They are often applied to mechanics in 3D space and are considered to be one of the best ways of representing rotations. In this paper a quaternion encryption method, based on algorithm by Nagase et al. (2004) has been proposed. According to a computer-based simulation the results of the performed research yield a high level of security, which is additionally strengthened by the...
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Selecting an Applicable Cybersecurity Assessment Framework: Qualitative Metrics-Based Multiple-Factor Analysis
PublikacjaRecently, a survey of cybersecurity assessment methods focused on general characteristics was conducted. Among its major findings, it revealed the methods’ adoption issues. This paper presents a follow-up to the study. It provides an in-depth analysis of the methods’ adoption-related properties based on qualitative metrics. As a result, the proposals which demonstrate a higher adoption potential were identified. The methods are...
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The analytical design method of railway route’s main directions intersection area
PublikacjaThe paper presents a design method related to railway track sections situated in a bend. In the method advantage is taken of an analytical form of description by using appropriate mathematical formulae. This may becomeparticularly usefulwhen the investigations are based on the data obtained from mobile satellite measurements. In the paper attention is concentrated on an universal approach creating an opportunity to diversify the...
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Z type Observer Backstepping For Induction Machines
PublikacjaThis paper contains a relatively new synthesis method for non-linear objects, named backstepping. This method can be used to obtain the observer structure. The paper presents the structure of the speed observer which is a new proposition of observer backstepping with additional state variables marked Z. The rotor speed can be estimated in three different ways. The first is based on the adaptive approach, the second on the nonadaptive...
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Selection of Relevant Features for Text Classification with K-NN
PublikacjaIn this paper, we describe five features selection techniques used for a text classification. An information gain, independent significance feature test, chi-squared test, odds ratio test, and frequency filtering have been compared according to the text benchmarks based on Wikipedia. For each method we present the results of classification quality obtained on the test datasets using K-NN based approach. A main advantage of evaluated...
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The instantaneous frequency rate spectogram
PublikacjaAn accelerogram of the instantaneous phase of signal components referred to as an instantaneous frequency rate spectrogram (IFRS) is presented as a joint time-frequency distribution. The distribution is directly obtained by processing the short-time Fourier transform (STFT) locally. A novel approach to amplitude demodulation based upon the reassignment method is introduced as a useful by-product. Additionally, an estimator of energy...
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RSS-Based DoA Estimation for ESPAR Antennas Using Support Vector Machine
PublikacjaIn this letter, it is shown how direction-of-arrival (DoA) estimation for electronically steerable parasitic array radiator (ESPAR) antennas, which are designed to be integrated within wireless sensor network nodes, can be improved by applying support vector classification approach to received signal strength (RSS) values recorded at an antenna's output port. The proposed method relies on ESPAR antenna's radiation patterns measured...
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Damage detection in plates based on Lamb wavefront shape reconstruction
PublikacjaMany of the current studies in the area of damage detection using elastic wave propagation are based on deploying sensor networks with a large number of piezoelectric transducers to detect small-size cracks. A major limitation of these studies is that cracks are usually larger and have different shapes in real cases. Moreover, using a large number of sensing nodes for damage detection is both costly and computationally intensive....
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The dynamic signature verification using population-based vertical partitioning
PublikacjaThe dynamic signature is an attribute used in behavioral biometrics for verifying the identity of an individual. This attribute, apart from the shape of the signature, also contains information about the dynamics of the signing process described by the signals which tend to change over time. It is possible to process those signals in order to obtain descriptors of the signature characteristic of an individual user. One of the methods...
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Nanoparticle Tracking Analysis of Urinary Extracellular Vesicle Proteins as a New Challenge in Laboratory Medicine
PublikacjaUrinary extracellular vesicle (uEV) proteins may be used as specific markers of kidney damage in various pathophysiological conditions. The nanoparticle-tracking analysis (NTA) appears to be the most useful method for the analysis of uEVs due to its ability to analyze particles below 300 nm. The NTA method has been used to measure the size and concentration of uEVs and also allows for a deeper analysis of uEVs based on their protein...
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Machine Learning Algorithm-Based Tool and Digital Framework for Substituting Daylight Simulations In Early- Stage Architectural Design Evaluation
PublikacjaThe aim of this paper is to examine the new method of obtaining the simulation-based results using backpropagation of errors artificial neural networks. The primary motivation to conduct the research was to determine an alternative, more efficient and less timeconsuming method which would serve to achieve the results of daylight simulations. Three daylight metrics: Daylight Factor, Daylight Autonomy and Daylight Glare Probability have...
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Application of multicriteria decision analysis in solvent type optimization for chlorophenols determination with a dispersive liquid–liquid microextraction
PublikacjaThis study presents a novel support tool for the optimization and development of analytical methods. The tool is based on multi-criteria decision analysis (MCDA), namely the Technique for Order of Preference by Similarity to the Ideal Solution (TOPSIS), that allows users to rank possible solutions according to their requirements. In this study, we performed rankings of pairs of eight extraction and three dispersive solvents used...
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Adaptive Method for Modeling of Temporal Dependencies between Fields of Vision in Multi-Camera Surveillance Systems
PublikacjaA method of modeling the time of object transition between given pairs of cameras based on the Gaussian Mixture Model (GMM) is proposed in this article. Temporal dependencies modeling is a part of object re-identification based on the multi-camera experimental framework. The previously utilized Expectation-Maximization (EM) approach, requiring setting the number of mixtures arbitrarily as an input parameter, was extended with the...
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Design thinking (DT) for the design and planning education of engineer-architects
PublikacjaEngineers are facing new challenges connected with globalisation, digitisation and the increased complexity of the design process. This calls for new, more interdisciplinary and user-oriented approaches to problem- solving. In this article, the authors analyse design thinking (DT) as a method to support the education of engineers specialising in architecture and urban planning. Identified in this study are the opportunities this...
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Novel Interpolation Method of Multi-DFT-Bins for Frequency Estimation of Signal with Parameter Step Change
PublikacjaThe IpDFT(Interpolation Discrete Fourier Trans-form) method is one of the most commonly used non-parametric methods. However, when a parameter (frequency, amplitude or phase) step changes in the DFT period, the DFT coefficients will be distorted seriously, resulting in the large estimation error of the IpDFT method. Hence, it is a key challenge to find an IpDFT method, which not only can eliminate the effect of the step-changed...
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Management of Urban Waters with Nature-Based Solutions in Circular Cities—Exemplified through Seven Urban Circularity Challenges
PublikacjaNature-Based Solutions (NBS) have been proven to effectively mitigate and solve resource depletion and climate-related challenges in urban areas. The COST (Cooperation in Science and Technology) Action CA17133 entitled “Implementing nature-based solutions (NBS) for building a resourceful circular city” has established seven urban circularity challenges (UCC) that can be addressed effectively with NBS. This paper presents the outcomes...
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Analysis of Organic Rankine Cycle efficiency and vapor generator heat transfer surface in function of the reduced pressure
PublikacjaIn the paper presented is analysis of the influence of reduced pressure on efficiency and heat transfer area of vapor generator of Organic Rankine Cycle (ORC) in case of subcritical and supercritical parameters of operation. Compared are two cases of subcritical and supercritical ORC featuring a similar arrangement of heat source supply and heat removal, that is featuring the same temperatures of working fluid before the turbine,...
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A Simplistic Downlink Channel Estimation Method for NB-IoT
PublikacjaThis paper presents a downlink channel estimation method intended for a Narrowband Internet of Things (NB-IoT) access link. Due to its low computational complexity, this method is well suited for energy-efficient IoT devices, still providing acceptable reception quality in terms of signal-to-noise (SNR) performance. This paper describes the physical layer of NB-IoT within the scope of channel estimation, and also reviews existing...
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Objects classification based on their physical sizes for detection of events in camera images
PublikacjaIn the paper, a method of estimation of the physical sizes of the objects tracked in the video surveillance system, and a simple module for object classification based on the estimated physical sizes, are presented. The results of object classification are then used for automatic detection of various types of events in the camera image.
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INDUSTRIAL HERITAGE IN “SACRIFICE ZONES”. THE POTENTIAL OF BOCAMINA I & II THERMOELECTRIC IN CORONEL, CHILE
PublikacjaThis work aims to present the recovery potential of the Chilean Sacrifice Zones, urban areas affected by high amounts of pollution caused by industrial activities. It centers in the case of “Bocamina I & II”, two Thermoelectric based in the city of Coronel, southern Chile. A settlement historically related to the mining processes. These plants operated for decades supplying the national energy grid and are seen as both symbols...
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Compatibility of Crude Oil Blends─Processing Issues Related to Asphaltene Precipitation, Methods of Instability Prediction─A Review
PublikacjaProcessing crude oil of variable composition, especially due to the need to process crude oil blends obtained from various sources, presents a tremendous process challenge. This is mainly due to the destabilization of the colloidal system manifested mostly by the precipitation of the asphaltene fraction. The precipitation of asphaltenes from crude oil is a serious problem during extraction, transport, and processing. In the latter...
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Novel and Efficient Synthesis of Unsymmetrical Trisulfides
PublikacjaWe have developed a convenient method for the synthesis of unsymmetrical trisulfides under mild conditions in very good yields. The designed method is based on the straightforward preparation of 1-[(5,5-dimethyl-2-thioxo-1,3,2-dioxaphosphorinan-2-yl)trisulfanyl]dodecane from readily available 5,5-dimethyl-2-sulfanyl-2-thioxo-1,3,2-dioxaphosphorinane, sulfur dichloride (SCl2) and dodecane-1-thiol. The unsymmetrical trisulfides can...
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An efficient and convenient synthesis of unsymmetrical disulfides from thioacetates
PublikacjaWe have developed convenient methods for the synthesis of functionalized unsymmetrical dialkyl disulfides under mild conditions in very good yields. The designed method is based on the reaction of (5,5-dimethyl-2-thioxo-1,3,2-dioxaphosphorinan-2-yl)-disulfanyl derivatives 1 with functionalized alkyl thiolate anions, generated in situ from thioacetates2and sodium methoxide or butylamine. The developed method allows the preparation...
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A simple approach to heat exchanger sizing optimisation by means of entrophy generation minimisation
PublikacjaIn the paper an attempt is presented to find the method of optimization of microtube diameter with respect to optimal thermal-hydraulic conditions in the single-phase shell-and-tube heat exchangers. The approach is based on consideration of pumping power at the condition of maximum heat transfer by the heat exchanger tube system. In the optimization method the tube diameter is first specified and then appropriate calculations are...
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Very high altitude micro air vehicle deployment method
PublikacjaThe paper presents the original work and method for high altitude micro air vehicle deployment. The method is based on the scientific ballooning, and adapted for stratospheric flight of commercial off-the-shelf micro air vehicle in flying wing configuration. The High Altitude Micro Air Vehicle, built for this research, was deployed during a test experiment at the lower level of the stratosphere. The results of the experiment and...
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Metoda określania maksymalnej prędkości jazdy na łukach, dostosowana do specyfiki tras tramwajowych
PublikacjaW artykule określono potrzebę obliczenia prędkości z jaką maksymalnie można poruszać się pojazdem tramwajowym na wybranych odcinkach trasy. Określono jakie wartości są niezbędne do wykonania obliczeń trakcyjnych. Dostosowano metodę do dostępnych danych, pochodzących z Mobilnych Pomiarów Satelitarnych. Porównano wyniki z algorytmami przeznaczonymi dla zastosowań kolejowych. Przeprowadzone analizy wykazały, że przy zastosowaniu proponowanego...
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Kod fontannowy z przyrastającą liczbą symboli źródłowych
PublikacjaKody fontannowe zabezpieczające transmisję przed wymazaniami wyróżnia brak określonej z góry długości i losowy sposób generacji kolejnych pakietów kodowych. W pracy pokazano jak właściwości tych kodów zależą od rozkładu macierzy generującej dla dwóch wariantów dostarczania pakietów do kodera. Szczególnie interesujący jest przypadek, gdy pakiety źródłowe trafiają do kodera stopniowo podczas transmisji. Uzyskane wyniki wskazują na...
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Quantum privacy witness
PublikacjaWhile it is usually known that the mean value of a single observable is enough to detect entanglement or its distillability, the counterpart of such an approach in the case of quantum privacy has been missing. Here we develop the concept of a privacy witness, i.e., a single observable that may detect the presence of the secure key even in the case of bound entanglement. Then we develop the notion of secret-key estimation based...
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Determination of Odour Interactions in Gaseous Mixtures Using Electronic Nose Methods with Artificial Neural Networks
PublikacjaThis paper presents application of an electronic nose prototype comprised of eight sensors, five TGS-type sensors, two electrochemical sensors and one PID-type sensor, to identify odour interaction phenomenon in two-, three-, four- and five-component odorous mixtures. Typical chemical compounds, such as toluene, acetone, triethylamine, α-pinene and n-butanol, present near municipal landfills and sewage treatment plants were subjected...
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Application of nanofluids in thermal technologies
PublikacjaNanofluids it is a relatively new category of thermal fluids that can serve as coolants, both in single- and two phase systems. However application of nanofluids in industrial applications requires faultless their thermophysical properties. Existing models originally developed for liquid/solid particles mixtures (slurries) fail in case of nanofluids. Moreover correlations used to calcuate heat transfer coefficients of conventional...
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Time Synchronization between the eNBs in E-UTRAN under the Asymmetric IP Network
PublikacjaIn this paper, we present a method for a time synchronization between the two eNodeBs (eNBs) in E-UTRAN (Evolved Universal Terrestrial Radio Access) network. The...
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Bearing capacity of working platform using distinct layout optimization method
PublikacjaBearing capacity of the working platforms from sandy soil resting on NC and OC clays was analyzed using LimitState GEO program. Different failure modes are considered using distinct layout optimization (DLO) method, which forms the upper bound solution of limit state analysis. Different mechanisms of failure were observed as a function of the platform thickness, angle of internal friction of the platform material and undrained...
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Blue applicability grade index (BAGI) and software: a new tool for the evaluation of method practicality
PublikacjaIn this work, blue applicability grade index (BAGI) is proposed as a new metric tool for evaluating the practicality of an analytical method. BAGI can be considered complementary to the well-established green metrics, and it is mainly focused on the practical aspects of White Analytical Chemistry. This tool evaluates ten main attributes including the type of analysis, the number of analytes that are simultaneously determined, the...
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Thermal and technological aspects of double face grinding of Al2O3 ceramic materials
PublikacjaDouble face grinding with planetary kinematics is a process to manufacture workpieces with plan parallel functional surfaces, such as bearing rings or sealing shims. In order to increase the economic efficiency of this process, it has to be advanced permanently. The temperature in the contact zone of most grinding processes has a huge influence on the process efficiency and the workpiece qualities. In contrast to most grinding...
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Performance evaulation of video object tracking algorithm in autonomous surveillance system
PublikacjaResults of performance evaluation of a video object tracking algorithm are presented. The method of moving objects detection and tracking is based on background modelling with mixtures of Gaussians and Kalman filters. An emphasis is put on algorithm's efficiency with regards to its settings. Utilized methods of performance evaluation based on comparison of algorithm output to manually prepared reference data are introduced. The...
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Performance evaluation of video object tracking algorithm in autonomous surveillance system
PublikacjaResults of performance evaluation of a video object tracking algorithm are presented. The method of moving objects detection and tracking is based on background modelling with mixtures of Gaussians and Kalman filters. An emphasis is put on algorithm's efficiency with regards to its settings. Utilized methods of performance evaluation based on comparison of algorithm output to manually prepared reference data are introduced. The...
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Path-based methods on categorical structures for conceptual representation of wikipedia articles
PublikacjaMachine learning algorithms applied to text categorization mostly employ the Bag of Words (BoW) representation to describe the content of the documents. This method has been successfully used in many applications, but it is known to have several limitations. One way of improving text representation is usage of Wikipedia as the lexical knowledge base – an approach that has already shown promising results in many research studies....
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Aestheticization of Flowcharts
PublikacjaOne of the important issues of diagrams is their aesthetics. In this paper a method of its formalization for freehand drawn flowcharts is proposed. In order to formalize the evaluation of flowcharts' aesthetics a criterion consisting of several measures is proposed. Based on this criterion the algorithms for automatic optimization of flowcharts' appearance are proposed.