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Assembly of Lipopolysaccharide in Escherichia coli Requires the Essential LapB Heat Shock Protein
PublikacjaHere, we describe two new heat shock proteins involved in the assembly of LPS in Escherichia coli, LapA and LapB (lipopolysaccharide assembly protein A and B). lapB mutants were identified based on an increased envelope stress response. Envelope stress responsive pathways control key steps in LPS biogenesis and respond to defects in the LPS assembly. Accordingly, the LPS content in ΔlapB or Δ(lapA lapB) mutants was elevated, with...
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Analiza sieci bezprzewodowych serii IEEE 802.15.x - Bluetooth (BT), UWB i ZigBee - z transmisją wieloetapową. Część I
PublikacjaW artykule zaprezentowano ogólną koncepcję pracy bezprzewodowych sieci mesh (Wireless Mesh Networks - WMNs), tj. sieci ad hoc z topologią złożoną (kratową) i z transmisją wieloetapową. Opisano podstawowe problemy projektowania i implementacji sieci WMN. Przedstawiono ogólne założenia nowego standardu IEEE 802.15.5 - WPAN Mesh. Skoncentrowano się przy tym na opisie i analizie bezprzewodowych sieci złożonych typu WPAN, realizowanych...
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Analiza sieci bezprzewodowych serii IEEE 802.15.x - Bluetooth (BT), UWB i ZigBee - z transmisją wieloetapową. Część II
PublikacjaW artykule zaprezentowano ogólną koncepcję pracy bezprzewodowych sieci mesh (Wireless Mesh Networks - WMNs), tj. sieci ad hoc z topologią złożoną (kratową) i z transmisją wieloetapową. Opisano podstawowe problemy projektowania i implementacji sieci WMN. Przedstawiono ogólne założenia nowego standardu IEEE 802.15.5 - WPAN Mesh. Skoncentrowano się przy tym na opisie i analizie bezprzewodowych sieci złożonych typu WPAN, realizowanych...
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Determination of nicotine in saliva, urine and wastewater samples using tantalum metal organic framework pipette tip micro-solid phase extraction
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3D dose verification with polymer gel detectors of brain-spine match line for proton pencil beam cranio-spinal: A preliminary study
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Simultaneous determination of ibuprofen and its metabolites in complex equine urine matrices by GC-EI-MS in excretion study in view of doping control
PublikacjaA novel assay for the simultaneous determination of ibuprofen (IBU) and its four probable metabolites, 1-hydroxyibuprofen (1-OH IBU), 2-hydroxyibuprofen (2-OH IBU), 3-hydroxyibuprofen (3-OH IBU) and carboxyibuprofen (CBX IBU) in equine urine samples with the application of Gas Chromatography-Electron Ionization-Mass Spectrometry (GC-EI-MS) has been developed and elaborated. The new approach for sample preparation including minimizing...
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Quantification of unconjugated and total ibuprofen and its metabolites in equine urine samples by gas chromatography–tandem mass spectrometry: Application to the excretion study
PublikacjaIbuprofen (IBU) is a widely used nonsteroidal anti-inflammatory drug (NSAID) in human and also veterinary medicine. NSAIDs are usually highly metabolized compounds in horses; they are often present in equine urine, mostly in their conjugated forms (glucuronides). Thus, hydrolysis to cleave the glucuronide linkage prior to anti-doping analysis is often necessary for improving detection. In this study, unconjugated and total IBU...
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Modeling a Traffic Remapping Attack Game in a Multi-hop Ad Hoc Network
PublikacjaIn multi-hop ad hoc networks, selfish nodes may unduly acquire high quality of service (QoS) by assigning higher priority to source packets and lower priority to transit packets. Such traffic remapping attacks (TRAs) are cheap to launch, impossible to prevent, hard to detect, and harmful to non-selfish nodes. While studied mostly in single-hop wireless network settings, TRAs have resisted analysis in multi-hop settings. In this paper...
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A. Computational analysis by molecular docking of thirty alkaloid compounds from medicinal plants as potent inhibitors of SARS-CoV-2 main protease(2020). Focused on analysis of the Medicinal plants that have potential therapeutic ability against COVID-19.
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Investigation of interaction between xanthene dye rhodamine B and metagenomic-derivated methylthioadenosine phosphorylase RSFP
PublikacjaIn the previous study we found that the expression of the metagenomic - derived methylthioadenosine phosphorylase gene (rsfp) in E. coli cells and the presence of rhodamine B in the growth medium were crucial for the pink fluorescence of one E. coli colony from Antarctic soil metagenomic library (Cieśliński et al., 2009). In this study, rsfp gene expression was induced by an arabinose promoter in an LMG194 E. coli strain and the...
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Zastosowanie analizy szeregów czasowych do oceny zanieczyszczenia powietrza atmosferycznego w rejonie Trójmiasta. Application of time series analysis on air quality assessment in the region of Tricity
PublikacjaNa podstawie analizy wyników pomiarów poziomów stężenia: NO3-, SO42-, F- ,Cl-, NH4+, PO43-, Ca2+, K+, Mg2+ oraz pomiarów pH i przewodności elektrolitycznej próbek wód opadowych na terenie Trójmiasta z zastosowaniem techniki analizy szeregów czasowych wykazano, że cykliczne wahania poziomów depozycji SO42-, F-, NO3- i Ca2+ w próbkach są skorelowane z cyklicznymi 9 zmianami przeważających kierunków wiatrów. Analiza struktury szeregów...
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Determination of tributylotin (TBT) in marine sediment using pressurised liquid extraction-gas chromatography-isotope dilution mass spectrometry (PLE-GC-IDMS) with a hexane-tropolone mixture
PublikacjaOpracowano metodę oznaczania zawartości tributylocyny w próbkach osadu morskiego. Na etapie izolacji zastosowano technikę przyspieszonej ekstrakcji za pomocą roztworu tropolonu w heksanie.Na etapie oznaczeń końcowych wykorzystano technikę chromatografii gazowej, stosując metodę spektrometrii mas rozcieńczenia izotopowego. Wyznaczono parametry walidacyjne opracowanej metody: granicę wykrywalności, precyzję, poprawność i niepewność.
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Determination of tributyltin (TBT) in marine sediment using pressurised liquid extraction–gas chromatography–isotope dilution mass spectrometry (PLE–GC–IDMS) with a hexane–tropolone mixture
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Germline DNA Retention in Murine and Human Rearranged T Cell Receptor Gene Coding Joints: Alternative Recombination Signal Sequences and V(D)J Recombinase Errors
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On the possible increasing of efficiency of ship power plant with the system combined of marine diesel engine, gas turbine and steam turbine at the main engine - steam turbine mode of cooperation
PublikacjaW pracy przedstawiono koncepcję układu kombinowanego okrętowego dużej mocy złożonego z silnika głównego tłokowego oraz skojarzonych z nim turbiny gazowej mocy i układu turbiny parowej, wykorzystujących energię zawartą w spalinach wylotowych silnika głównego tłokowego. Rozpatrywano układ kombinowany układ złożony z silnika spalinowego tłokowego skojarzony z układem turbiny parowej. Podano algorytm i obliczenia poszczególnych podukładów:...
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Eksploatacyjne obciążenia śrub napędowych pogłębiarek różnych typów w podstawowych stanach ich eksploatacji = Operational loads of propellers of different dredgers types in main service states
PublikacjaArtykuł przedstawia wyniki badań eksploatacyjnych dotyczących jednego z najważniejszych odbiorników energii mechanicznej na pogłębiarkach: śrub napędowych. Badania eksploatacyjne obejmowały pomiary parametrów charakteryzujących obciążenia śrub napędowych pogłębiarek w dwóch podstawowych stanach ich eksploatacji: roboty pogłębiarskie i pływanie swobodne. Przedstawione w pracy wyniki obejmują 10 pogłębiarek (8 pogłębiarek ssących...
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Modern approach for determination of lactulose, mannitol and sucrose in human urine using HPLC-MS/MS for the studies of intestinal and upper digestive tract permeability
PublikacjaA new analytical procedure was described for the simultaneous determination of lactulose, mannitol and sucrose in urine, in which HILIC chromatography and tandem mass spectrometry detection are used. Sugars are orally administered for the estimation of intestinal permeability in children digestive tract. Samples were purified by dispersive solid phase extraction (d-SPE) using Amberlite MB150 resin. Raffinose was selected as an...
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Discriminating macromolecular interactions based on an impedimetric fingerprint supported by multivariate data analysis for rapid and label-free Escherichia coli recognition in human urine
PublikacjaThis manuscript presents a novel approach to address the challenges of electrode fouling and highly complex electrode nanoarchitecture, which are primary concerns for biosensors operating in real environments. The proposed approach utilizes multiparametric impedance discriminant analysis (MIDA) to obtain a fingerprint of the macromolecular interactions on flat glassy carbon surfaces, achieved through self-organized, drop-cast,...
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Monitoring of occupational exposure to volatile organohalogen solvents (VOXs) in human urine samples of dry-cleaner workers by TLHS-DAI-GC-ECD procedure
PublikacjaChlorinated hydrocarbon solvents are often used for dry-cleaning clothes in the laundry industry. The object of this study was to monitor the occupational exposure of dry-clean employees coming into contact with VOXs. 25 workers collected their urine samples before the work shift, after 4 hours of work and after the work shift. The analyses of urine samples and solvents used in dry-cleaning were performed using TLHS-DAI-GC-ECD....
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Funkcjonalne właściwości preparatu białek mięśniowych z kręgosłupów dorsza bałtyckiego = Functional properties of a muscle protein preparation from Baltic cod spine
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Determination of pterins in urine by HPLC with UV and fluorescent detection using different types of chromatographic stationary phases (HILIC, RP C8, RP C18)
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A Novel Electrochemical Sensor Based on Graphene Oxide Nanosheets and Ionic Liquid Binder for Differential Pulse Voltammetric Determination of Droxidopa in Pharmaceutical and Urine Samples
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Architecture of ecumenical spaces in public buildings in the 21st century: Links among the architecture of multi-faith spaces, their names, and the functions they serve in Polish airports
PublikacjaThis study explores the architecture and arrangement of prayer spaces in public buildings. It examines whether Polish airports have prayers spaces and whether a correlation exists between the name (e.g., “multi-faith space,” “place of prayer,” and “place of focus”) and design. The study is supported by analyses of ecumenical spaces, which have recently been brought into service andwhere a visible symbiosis exists between their...
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Cloning, expression, and biochemical characterization of a coldactive GDSL-esterase of a Pseudomonas sp. S9 isolated from Spitsbergen island soil
PublikacjaAn estS9 gene, encoding an esterase of the psychrotolerant bacterium Pseudomonas sp. S9 was cloned and sequenced. The deduced sequence revealed a protein of 636 amino acid residues with a molecular mass of 69 kDa.Further amino acid sequence analysis revealed that the EstS9 enzyme contained a G-D-S-L motif centered at a catalytic serine, an N-terminal catalytic domain and a C-terminal autotransporter domain. Two recombinant E. coli...
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Mobility Oriented Development (MOD): Public-Private Partnership in Urban Parking & Traffic Management with the Use of Autonomous Automobiles, Car-Sharing, Ridesharing Modes of Transport & Mobility as a Service (MaaS)
PublikacjaThe focus of the following research are relations between mobility technologies and metropolitan (urban and suburban) spatial structures. In this paper the author discusses various urban modes of transport (automobile, mass transit) in the context of emerging technical (autonomous vehicles, self-driving cars and driverless shuttles) and organizational (carpooling, ridesharing, car-sharing, on-demand mobility) solutions for " mobility...
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Selected problems of estimation of road and marine transport resources operation fuel consumption = Wybrane problemy oceny eksploatacyjnego zużycia paliwa w środkach transportu drogowego i morskiego
PublikacjaW referacie przedstawiono metody oceny eksploatacyjnego zużycia paliwa w środkach transportu drogowego. Omówiono testy zużycia paliwa prowadzone przez producentów pojazdów oraz zaprezentowano problematykę ich reprezentatywności dla dzisiejszych warunków ruchu. W drugiej części referatu przedstawiono problematykę prognozowania zużycia paliwa statków towarowych ze szczególnym uwypukleniem odmienności opisu warunków eksploatacji środków...
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Pronounced cytostatic activity and bystander effect of a novel series of fluorescent tricyclic acyclovir and ganciclovir derivatives in herpes simplex virus thymidine kinase gene-transduced tumor cell lines
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Graphical presentation of the power of energy losses and power developed in the elements of hydrostatic drive and control system. Part I. Rotational hydraulic motor speed series throttling control systems
PublikacjaZaproponowano i uzasadniono wykres przedstawiający kierunek wzrostu strumienia mocy narastającej od wału lub tłoczyska silnika hydraulicznego do wału pomopy, mocy narastającej w wyniku wymuszania przez moce strat energetycznych występujących w elementach układu i sterowania hydrostatycznego. Przedstawiono interpretację graficzną mocy strat energetycznych występujących w elementach układów, a także mocy rozwijanych przez te elementy....
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Potential of Polish R&D industry in the context of prototyping, design, development and control of a dedicated national satellite SAR system for marine ecosystem monitoring. Technical paper - preliminary study
Publikacjapace technology is currently one of the most important elements in the advance of information societies and knowledge-based economies all over the world. The European Space Agency (ESA) is in the focal point of European space activities, while the European Union provides strong financial support for the development of space technologies and applications in its flagship programs. In a domestic scope, the Polish Space Agency (POLSA)...
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DETERMINING THE TIME CONSTANT USING TWO METHODS AND DEFINING THE THERMOCOUPLE RESPONSE TO SINE EXCITATION OF GAS TEMPERATURE
PublikacjaThis paper describes the two methods of determining the time constant of type K thermocouple, for two construction solutions: the exposed weld and the mantle fillet weld. This is an important parameter indicating the response time of the thermocouple on the recorded signal. The first method consists of determining the value of τ in the way of numerical simulation of heat exchange between the thermocouple and the current of gas...
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Quantum corrections to quasi-periodic solution of Sine-Gordon model and periodic solution of phi^4 model
PublikacjaAnalytical form of quantum corrections to quasi-periodic solution of Sine-Gordon model and periodic solution of phi^4 model is obtained through zeta function regularisation with account of all rest variables of a d-dimensional theory. Qualitative dependence of quantum corrections on parameters of the classical systems is also evaluated for a much broader class of potentials u(x) = b^2 f(bx) + C with b and C as arbitrary real constants
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MUTL PROTEIN AS A COMMON CONSTITUENT OF VSP, BER, NER AND MMR REPAIR SYSTEMS
PublikacjaMutS and MutL proteins are renowned mostly for their functions in well-characterized, post-DNA replication mismatch repair system (MMR). However, there is growing evidence that MMR system is not the only field of action of these proteins. Moreover, involvement in MMR does not even have to be their primary function. There are some reports indicating involvement of MutL in BER, NER and VSP (very short patch repair). MutL protein...
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Water-mediated influence of a crowded environment on internal vibrations of a protein molecule
PublikacjaThe influence of crowding on the protein inner dynamics is examined by putting a single protein molecule close to one or two neighboring protein molecules. The presence of additional molecules influences the amplitudes of protein fluctuations. Also, a weak dynamical coupling of collective velocities of surface atoms of proteins separated by a layer of water is detected. The possible mechanisms of these phenomena are described....
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Development of thin film SPME sorbents based on deep eutectic solvents and their application for isolation and preconcentration of endocrine-disrupting compounds leaching from diapers to urine
PublikacjaIn this study, the thin film solid phase microextraction (TF-SPME) based on a novel sorbent composed of deep eutectic solvent (DES) is proposed. Among several synthesized sorbents the most efficient was DES containing trihexyl(tetradecyl)phosphonium chloride and docosanol mixed with polydimethylsiloxane (PDMS) in a molar ratio 1:3:0.25 to achieve a more stable structure. The proposed sorbent was applied on a fiberglass mesh and...
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Skład moczu jako źródło informacji o narażeniu zawodowym na związki organiczne = Urine as a source of information on accupational exposure to organic compounds - A review
PublikacjaW publikacja przedstawiono przegląd informacji na temat wykorzystania próbek moczu ludzkiego do badań analitycznych, prowadzonych w celu uzyskania informacji o ekspozycji zawodowej na związki organiczne. Toksyczne działanie większości z tych związków stwarza nadal duże zagrożenie wystąpienia chorób zawodowych. Stąd też bardzo ważne jest wykorzystanie monitoringu biologicznego do ocena ryzyka zawodowego. W pracy przedstawiono również...
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Determination of mefenamic acid in urine and pharmaceutical samples by HPLC after pipette-tip solid phase microextraction using zinc sulfide modified carbon nanotubes
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Prezentacja instalacji artystycznej "Mam dla Ciebie moje serce" na wystawie zbiorowej „WETWARE: PROLIFERACJA I PRZECZUCIE” w Instytucie Cybernetyki Sztuki
Publikacja„WETWARE: PROLIFERACJA I PRZECZUCIE” Marcin Bożek, Marta Branicka, Flora Ćwirko + Jan Maurycy Adamski, Jowan Czerkas, Urszula Dulewicz, Dorota Grubba Thiede + Danuta Ćwirko Godycka, Tomasz Kopcewicz, Marta Koniarska, Maria Krupa, Monika Krygier + Stefan Krygier + Włodzimierz Pietrzyk, Przemysław Kryszk, Ryszard Ługowski, Krzysztof Malec, Anna Malinowska, Andrzej Egon Fietke Miastkowski, Piotr Tadeusz Mosur, Mateusz Pęk, Katarzyna...
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Modelling gene expression of a self-regulating protein
PublikacjaWe analyze a model of gene transcription and protein synthesis. We take into account the number of sites on the protein’s promoter at which the protein’s dimers can bind blocking transcription of protein mRNA.
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Development of a simulation model of the activities of a transport and forwarding enterprise in the organization of international road cargo transportation
PublikacjaThe object of this study is the process of planning the work of a transport and forwarding company when serving different categories of customers who need organizational support for the delivery of goods by road transport in international traffic. The solved problem is due to the need to devise recommendations for organizing the work of forwarders when interacting with customers of transport and forwarding services that export...
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Cloning, Expression and Purification of Wild-Type Trehalose Synthase from Deinococcus geothermalis
PublikacjaThe aim of this study was isolation and cloning of trehalose synthase gene derived from extremophilic microorganism to the expression vectors in the Tabor-Studier system and its expression in Rosetta(DE3)pLysS Escherichia coli cells. The second phase of the study consisted of proteins purification using an initial denaturation of host proteins and salting-out proteins by ammonium sulfate.
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MutL protein as a constituent of vsp, ner and mmr repair systems
PublikacjaMutS and MutL proteins are renowned mostly for their functions in well-characterized, post-DNA replication mis- match repair system (MMR). However, there is growing evidence that MMR system is not the only field of action for these pro- teins. Moreover, the participation in MMR does not even have to be their primary function. There are some reports indicat- ing involvement of MutL in BER, NER and VSP (very short patch repair)....
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The impact of lipophilicity on environmental processes, drug delivery and bioavailability of food components
PublikacjaLipophilic properties of the compound allow to predict its fate in living organisms and to propose the models of chemicals transport and accumulation in the ecosystem. Lipophilicity is also useful as the characteristic of chemicals in respect to their optimal attributes for specific biological and non-biological tasks. The lipophilicity descriptors define the potency of endo- and xenobiotics to metabolic transformations and their...
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Fatty acyl benzamido antibacterials based on inhibition of DnaK-catalyzed protein folding
PublikacjaWe have reported that the hsp70 chaperone DnaK from Escherichia coli might assist protein folding by catalyzing the cis/trans isomerization of secondary amide peptide bonds in unfolded or partially folded proteins. In this study a series of fatty acylated benzamido inhibitors of the cis/trans isomerase activity of DnaK was developed and tested for antibacterial effects in E. coli MC4100 cells. Nα-[Tetradecanoyl-(4-aminomethylbenzoyl)]-l-asparagine...
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Long-Term GNSS Tropospheric Parameters for the Tropics (2001-2018) Derived from Selected IGS Stations
PublikacjaThis paper describes dataset “Tropospheric parameters derived from selected IGS stations in the tropics for the years 2001-2018” contains GNSS-derived zenith tropospheric delay (ZTD), a posteriori corrected zenith wet delay (ZWD), and precipitable water vapour (PWV) time series. These troposphere-related data were estimated for the Jan 2001 – Dec 2018 period for 43 International GNSS Service (IGS) stations located across the global...
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Effects of safety barrier life cycle cost factors - identification and analysis
PublikacjaThe costs borne by road infrastructure authorities for managing and maintaining road devices such as safety barriers may be very high. This has prompted the need for identifying and analysing in detail all factors that influence the costs of safety barriers throughout their service life. To meet that need, the authors used international experience and field data collected under the LifeRoSE project to define the cost structure...
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On the possible increasing of efficiency of ship power plant with the system combined of marine diesel engine, gas turbine and steam turbine in case of main engine cooperation with the gas turbine fed in parallel and the steam turbine
PublikacjaW pracy przedstawiono koncepcję układu kombinowanego okrętowego dużej mocy złożonego z wiodącego silnika głównego spalinowego silnika tłokowego i skojarzonych z nim turbiny gazowej mocy i układu turbiny parowej, wykorzystujących energię zawartą w spalinach wylotowych głównego silnika spalinowego. Rozpatrzono wariant układu kombinowanego, w którym główny jest silnik tłokowy skojarzony z turbiną gazową mocy i układem turbiny parowej,...
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System information propagation for composite structures
PublikacjaWe study in details decoherence process of a spin register, coupled to a spin environment. We use recently developed methods of information transfer study in open quantum systems to analyze information flow between the register and its environment. We show that there are regimes when not only the register decoheres effectively to a classical bit string, but this bit string is redundantly encoded in the environment, making it available...
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Early Oceanographical Data Collected by the Institute of Oceanography, University of Gdańsk
PublikacjaThree data sets entitled Water currents in Głębinka Passage in late spring of 1975, Hydrometeorological and hydrochemical conditions in the Gulf of Gdańsk in the vicinity of Vistula river mouth in July of 1977, and Gulf of Gdańsk monitoring conducted by the Institute of Oceanography, University of Gdańsk, in 1981–1994 contain archival field measurement results from the Gulf of Gdańsk (the southern Baltic). The data can be used...
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Suppressors of lapC mutation identify new regulators of LpxC, which mediates the first committed step in lipopolysaccharide biosynthesis
PublikacjaGram-negative bacteria, such as Escherichia coli, are characterized by an asymmetric outer membrane (OM) with lipopolysaccharide (LPS) located in the outer leaflet and phospholipids facing the inner leaflet. E. coli recruits LPS assembly proteins LapB, LapC and LapD in concert with FtsH protease to ensure a balanced biosynthesis of LPS and phospholipids. We recently reported that bacteria either lacking the periplasmic domain of...
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Rozpoznawanie uszkodzeń w części przepływowej okrętowego turbinowego silnika spalinowego na podstawie wyników badania endoskopowego = Failures' recognising within the passages of a marine gas turbine engine on the basis of results of endoscopic investigation
PublikacjaThe paper deals with diagnostic issues concerning endoscopic examinations of marine gas turbine engines. There will be presented selected information about failures within the passages and accessible endoscopic methods and means enabling their detection. The author focuses on the endoscopic techniques and widely presents the possibilities of this quickly developed diagnostic method. There will be also presented representative results...