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Search results for: PCR CONTAMINATION
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Identification and properties of the psychrophilic bacterium Desulfolatea psychrophila single-stranded DNA binding proteins
PublicationTo study the biochemical properties of SSB from Desulfolatea psychrophila (DpsSSB), we have cloned the ssb genes obtained by PCR and have developed Escherichia coli overexpression systems. The gene consists of an open reading frame of 426 nucleotides encoding SSB protein of 142 amino acids with a calculated molecular mass of 15.6 kDa and it is the smallest known bacterial SSB protein indentified to date. The amino-acid sequence...
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Molecular and chemical monitoring of growth and Ochratoxin A biosynthesis of P. verrucosum in wheat stored at different moisture conditions
PublicationDoświadczenie polegało na obserwacji wzrostu P. verrucosum na ziarnach pszenicy, składowanej w różnych warunkach (wilgotność, temperatura) oraz zdolności do produkcji Ochratoksyny A (OTA) przez tę pleśń. Wzrost mierzony był w jednostkach tworzących kolonie (cfu colony forming units). Biosynteza OTA kontrolowana była przy pomocy HPLC, a ekspresja genu otapksPV syntetazy OTA mierzona w czasie przy pomocy odwrotnej transkryptazy...
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Dissection of σE‐dependent cell lysis in Escherichia coli: roles of RpoE regulators RseA, RseB and periplasmic folding catalyst PpiD
PublicationTo understand the mechanism of sigma(E)-dependent cell lysis, we examined the consequences of deletion derivatives of rpoE regulators rseA, rseB and rseC on sigma(E) transcription, on levels of free versus membrane-bound sigma(E) and on OMP-biogenesis limiting factor(s) that could impact cell lysis. RT-PCR showed that individual nonpolar DeltarseA and DeltarseB increased the rpoE expression to varying extents, with pronounced induction...
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Detection of the Plant Pathogen Pseudomonas Syringae pv. Lachrymans on Antibody-Modified Gold Electrodes by Electrochemical Impedance Spectroscopy
PublicationThe present work describes an impedimetric immunosensor for Pseudomonas syringae pv. lachrymans (Psl) detection. This pathogen infects many crop species causing considerable yield losses, thus fast and cheap detection method is in high demand. In the assay, the gold disc electrode was modified with 4-aminothiophenol (4-ATP), glutaraldehyde (GA), and anti-Psl antibodies, and free-sites were blocked with bovine serum albumin (BSA)....
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Lung perfusion parameters in the diagnosis of diabetic pulmonary microangiopathy
PublicationThis paper presents the role of perfusion computed tomography (pCT) in the diagnosis of diabetic pulmonary microangiopathy. Our previous works have shown that perfusion parameters are useful in the diagnosis of diabetic pulmonary microangiopathy. In this article we focus on conditions that are necessary for such the diagnosis and introduce method of classification no microangiopathy vs. microangiopathy based on logistic regression....
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Position and velocity measurement using incremental encoder and microcontroller.
PublicationThere is presented measurement of position and velocity using Atmel's microcontroller ATTiny2313 with 20 MHz clock and encoder with 1024 pulses per revolution. This configuration allows measuring maximum speed 48800 rpm with 1x accuracy, 20200 rpm with 2x accuracy and 9400 rpm with 4x accuracy (quadrature). Position is measured with resolution of 0.352', 0.176' and 0.088' for 1x, 2x, 4x accuracy respectively. Algorithms of position...
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High-speed binary-to-residue converter with the reduced input layer
Publicationprzedstawiono architekturę szybkiego konwertera z systemu binarnego do systemu resztowego dla modułów 5-bitowych. Algorytm konwersji oparty jest na dodawaniu binarnym reszt potęg liczby 2 obliczonych modulo m i redukcji modulo m sumy dla poszczególnych modułów bazy systemu resztowego. Warstwa wejciowa konwertera jest redukowana poprzez wykorzystanie wspólnych elementów układu dla odpowiednio zestawionych par modułów.
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Bogdan Pankiewicz dr hab. inż.
PeopleBogdan Pankiewicz graduated in 1993 from the Department of Electronics at Gdansk University of Technology (GUT) and in 2002 he obtained a doctoral degree in the field of electronics at the Faculty of Electronics, Telecommunications and Informatics at GUT. From the beginning of his career he is associated with GUT: first as an assistant (years 1994-2002) and then as assistant professor (since 2002) at the Faculty of Electronics,...
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Invasive breast carcinoma of no special type - Female, 61 - Tissue image [10100730045412091]
Open Research DataThis is the histopathological image of BREAST tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format.
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Invasive breast carcinoma of no special type - Female, 61 - Tissue image [10100730045416851]
Open Research DataThis is the histopathological image of BREAST tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format.
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Tubular carcinoma - Female, 69 - Tissue image [7120729593143221]
Open Research DataThis is the histopathological image of BREAST tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format.
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Invasive breast carcinoma of no special type - Female, 61 - Tissue image [10100730045417991]
Open Research DataThis is the histopathological image of BREAST tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format.
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Tubular carcinoma - Female, 69 - Tissue image [7120729593146571]
Open Research DataThis is the histopathological image of BREAST tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format.
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Invasive breast carcinoma of no special type - Female, 61 - Tissue image [10100730045415461]
Open Research DataThis is the histopathological image of BREAST tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format.
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Invasive micropapillary carcinoma of breast - Female, 64 - Tissue image [4250730010191491]
Open Research DataThis is the histopathological image of BREAST tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format.
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Invasive breast carcinoma of no special type - Female, 61 - Cell image [10100730045417931]
Open Research DataThis is the histopathological image of BREAST cell sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format.
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Invasive breast carcinoma of no special type - Female, 61 - Tissue image [1010073004541621]
Open Research DataThis is the histopathological image of BREAST tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format.
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Invasive breast carcinoma of no special type - Female, 61 - Tissue image [10100730045414341]
Open Research DataThis is the histopathological image of BREAST tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format.
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Tubular carcinoma - Female, 69 - Tissue image [7120729593145101]
Open Research DataThis is the histopathological image of BREAST tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format.
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Tubular carcinoma - Female, 69 - Tissue image [7120729593141871]
Open Research DataThis is the histopathological image of BREAST tissue sample obtained in Medical University Gdańsk and deposited in ZMDL-GUMED. The sample image was taken using: Pannoramic 250 3DHistech slide scanner (20x magnification) and saved to DICOM format.
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Jolanta Wielgus, WETI, ACR+IB, st. I, 3 sem., 2021/2022z
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Local impedance spectroscopy of membranes
PublicationCelem niniejszej publikacji jest zaprezentowanie zastosowania techniki Lokalnej Elektrochemicznej Spektroskopii Impedancyjnej (LEIS) do uzyskania lokalnej charakterystyki membran. Membranę wykonaną z polichlorku winylu (PCV), plastyfikowaną sebacynianem bis(2etyloheksylu) i domieszkowaną boranem tetradodecyloamoniowym zbadano pod kątem równomiernego rozkładu przewodnictwa na powierzchni badanej próbki. Lokalne pomiary impedancyjne,...
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Broadcast copies reveal the quantumness of correlations
PublicationWe study the quantumness of bipartite correlations by proposing a quantity that combines a measure of total correlations-mutual information-with the notion of broadcast copies-i.e., generally nonfactorized copies-of bipartite states. By analyzing how our quantity increases with the number of broadcast copies, we are able to classify classical, separable, and entangled states. This motivates the definition of the broadcast regularization...
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Analiza sieci pętlowych pod względem niezawodności
PublicationZałożono, że sieć ma strukturę pętlową. Jako oceny niezawodności tych sieci przyjęty jest: 1) średnią liczbę sprawnych par węzłów, które mogą komunikować się wzajemnie. Przyjęto następujący model uszkodzeń. Węzły i kanały ulegają uszkodzeniom z określonym prawdopodobieństwem, uszkodzenia elementów sieci są od siebie niezależne. Wyznaczono niezawodność sieci jako funkcję prawdopodobieństwa sprawności elementów sieci oraz liczby...
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Direct measurement of nonlinear properties of bipartite quantum states
PublicationNieliniowe własności stanów kwantowych, takie jak entropia, splątania, określają ilość ważnych fizycznych źródeł i są często używane w informatyce kwantowej. Na ogół są one obliczane z pełnego opisu stanu kwantowego, pomimo tego, że zależą od niewielkiej ilości parametrów opisujących dany stan. Wyciągamy nielokalną i nieliniową wielkość, mianowicie entropię Renyi, z lokalnych pomiarów dwóch par fotonów splątanych polaryzacyjnie.
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Modifiers for Medical Grade Polymeric Systems used in FDM 3D Printing - Short Review
PublicationFDM 3D printing could find an application in the wide range of biomedical applications. Unfortunately, the quantity of polymeric biomaterials suitable to processing into filaments is limited. The most frequently used biomaterials for medical constructs such as bone grafts, soft tissue scaffolds or another DDS include PCL, PLA, PVA, HPC, EVA copolymer, EC and TPUs. Various modifiers such as TCP, HA, TEC, MMC could be applicated...
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Wydatki na opiekę zdrowotna a wskaźniki zdrowotne na przykładzie wybranych państw OECD
PublicationW artykule przedstawiono korelację pomiędzy wydatkami na opiekę zdrowotną na osobę w $, wydatkami na administrację opieki zdrowotnej i ubezpieczeń w $ per capita a wskaźnikami zdrowotnymi. Z analizy danych wynika że istnieje silna korelacja ujemna pomiędzy wydatkami a wskaźnikiem zgonów i wskaźnikiem śmiertelności niemowląt oraz dodatnia korelacja pomiędzy wydatkami a przewidywana długością życia, silniejsza w wielu państwach dla...
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Ocena stanu technicznego konstrukcji zgarniaczy będących na wyposażeniu osadników wstępnych Grupowej Oczyszczalni Ścieków „DĘBOGÓRZE
PublicationOsadniki wstępne typu DORRA – 4 szt., o pojemności 1830 m3, wyposażone są w elementy mechaniczne do kierunkowego przemieszczania się osadu w kierunku leja centralnego. Celem pracy jest ocena stany technicznego części mechanicznej, a w szczególności: - konstrukcji zespołu zgarniania części pływających oraz osadu. - zespołu napędu i sterowania, - zespołu napędu i jazdy. Pierwsze dwa zespoły będą oceniane również z punktu widzenia...
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Collagen type II–hyaluronan interactions – the effect of proline hydroxylation: a molecular dynamics study
PublicationHyaluronan–collagen composites have been employed in numerous biomedical applications. Understanding the interactions between hyaluronan and collagen is particularly important in the context of joint cartilage function and the treatment of joint diseases. Many factors affect the affinity of collagen for hyaluronan. One of the important factors is the ratio of 3- or 4-hydroxy proline to proline residues. This article presents...
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THE IMPACT OF ENVIRONMENTAL TAXES ON TRANSPORTATION AND STORAGE ENTERPRISES’ DEVELOPMENT – THE CASE OF BALKAN COUNTRIES
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The Leaderless Bacteriocin Enterocin K1 Is Highly Potent against Enterococcus faecium: A Study on Structure, Target Spectrum and Receptor
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Zdzisław Kowalczuk prof. dr hab. inż.
PeopleZdzislaw Kowalczuk received his M.Sc. degree in 1978 and Ph.D. degree in 1986, both in Automatic Control from Technical University of Gdańsk (TUG), Gdańsk, Poland. In 1993 he received his D.Sc. degree (Dr Habilitus) in Automatic Control from Silesian Technical University, Gliwice, Poland, and the title of Professor from the President of Poland in 2003. Since 1978 he has been with Faculty of Electronics, Telecommunications and Informatics...
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Computer Controlled Systems Lab - 2023/2024
e-Learning CoursesComputer Controlled Systems Lab The course includes 5 individual projects and their laboratory implementation. The topics:- Job analysis and tuning digital servo- Usage of a PC computer and MatLab package for controlling the dynamic object as a model of the tethered helicopter- Use of C language and the PC to control the plant in real time- Use of assembly language, and a microcontroller to control the plant in real time- Use...
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Computer Controlled Systems Lab - Nowy - Nowy
e-Learning CoursesComputer Controlled Systems Lab The course includes 5 individual projects and their laboratory implementation. The topics:- Job analysis and tuning digital servo- Usage of a PC computer and MatLab package for controlling the dynamic object as a model of the tethered helicopter- Use of C language and the PC to control the plant in real time- Use of assembly language, and a microcontroller to control the plant in real time- Use...
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Recent developnents in wastewater treatment in constructed wetlands in Poland
PublicationNowadays more than 100 constructed wetlands are in operation in Poland. Most of them are one stage wetland systems with horizontal subsurface flow. Such constructed wetlands ensure efficient removal of organic matter (BOD5, CODCr) and suspended solids but efficiency of nitrogen compounds removal in many cases is insufficient.In the period from 1995 to 2003 measurements of removal of contaminations in 11 individual pilot household...
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Rola koloidalnych i zawiesinowych związków organicznych w technologii oczyszczania ścieków metodą osadu czunnego z biologicznym usuwaniem związków biogennych
PublicationRolę koloidalnych i zawiesinowych związków organicznych w technologii oczyszczania ścieków metodą osadu czynnego określono na podstawie badań kinetyki wybranych procesów biochemicznych tj. szybkość procesu denitryfikacji (z ang. NUR), poboru tlenu (z ang. OUR), uwalniania fosforanów (z ang. PRR) i poboru fosforanów w warunkach anoksycznych i tlenowych (z ang. PURANOX/PURAERO). Doświadczenia przeprowadzono z użyciem dwóch równoległych...
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Property-performance relationship of core-shell structured black TiO2 photocatalyst for environmental remediation
PublicationUnderstanding the relationship between the properties and performance of black titanium dioxide with core-shell structure (CSBT) for environmental remediation is crucial for improving its prospects in practical applications. In this study, CSBT was synthesized using a glycerol-assisted sol-gel approach. The effect of different water-to-glycerol ratios (W:G = 1:0, 9:1, 2:1, and 1:1) on the semiconducting and physicochemical properties...
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The condition of economies. Do most valuable global brands matter?
PublicationResearch background: Brands are considered to be the most valuable asset of a company. Some of them achieve spectacular global results. The significance of global brands is proved by the fact that their value is often greater than the sum of all company’s net assets. Purpose of the article: The aim of this article is to highlight that brand value does not only create company’s value, but also leverages economies. The Authors claim...
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Maciej Łuszczek dr hab. inż.
PeopleMaciej Łuszczek born in 1967 in Gdynia. He received the M.Sc. degree in Applied Physics in 1991, the Ph.D. degree in 1999, and the D.Sc. (‘habilitation’) degree in 2015, all from the Gdańsk University of Technology. Since 1991 he has been with the above university, initially at the Faculty of Applied Physics and Mathematics, Department of Solid State Physics, and currently (since 2015) at the Faculty of Electrical and Control Engineering,...
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Photocatalytic activity of solvothermal prepared BiOClBr with imidazolium ionic liquids as a halogen sources in cytostatic drugs removal
PublicationIn this work, the BiOClBr, as a new family of bismuth based semiconductors, was successfully applied to remove of cytostatic drugs from water under UV-Vis light irradiation. BiOCl, BiOBr and BiOClBr were synthesized using two steps solvothermal method in glycerol. The inorganic salts (KCl and KBr) and 1-butyl-3-metylimidazolium chloride (BmimCl) and 1-butyl-3-metylimidazolium bromide (BmimBr) ionic liquids (ILs) were used as the...
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TiO2 nanotube arrays-based reactor for photocatalytic oxidation of parabens mixtures in ultrapure water: Effects of photocatalyst properties, operational parameters and light source
PublicationSelf-organized TiO2 nanotubes as immobilized photocatalysts were evaluated in detail for the photocatalytic degradation of parabens mixtures from ultrapure water. This kind of approach can be a very suitable option for emerging contaminants degradation considering the possibility of the catalyst reuse and recovery which will be simpler than when catalytic powders are used. The anodization method was applied for the TiO2 nanotubes...
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Kotły i wymienniki ciepła, W, C, sem.5, zimowy 22/23 (PG_00045072)
e-Learning CoursesPrzewodzenie ciepła. Przejmowanie ciepła (konwekcja swobodna, konwekcja wymuszona, przy skraplaniu par). Przenikanie ciepła. Rodzaje przepływu w wymiennikach ciepła. Budowa wymienników ciepła. Dobór wymienników ciepła. Instalacja parowa grzewcza. Kotły, budowa i wielkości charakterystyczne. Paliwa kotłowe i woda kotłowa. Materiały kotłowe i uszkodzenia kotłów. Wymiana ciepła w kotłach.
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Jakub Szulwic dr inż.
PeopleJakub Szulwic (born 23 December 1974 in Bydgoszcz, Poland) – is an experienced, licensed Land Surveyor, specialized in construction monitoring by the use of photogrammetric methods and laser scanning technology. His specialization are geomatics and geoinformatics. He is an author about 100 publications including 50 indexed in Web of Science (H-index = 15) In 1993, He graduated from Secondary School in Tuchola, Poland on physics...
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Teratomas of Drosera capensis var. alba as a source of naphthoquinone: ramentaceone
PublicationPlants belonging to genus Drosera (family Droseraceae) contain pharmacologically active naphthoquinones such as ramentaceone and plumbagin. Hairy root cultures obtained following Agrobacterium rhizogenes-mediated transformation have been reported to produce elevated levels of secondary compounds as well as exhibit desirable rapid biomass accumulation in comparison to untransformed plants. The aim of this study was to establish...
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Novel single-stranded DNA-binding protein from psyvhrophilic bacterium Psychrobacter arcticus
PublicationTo study the biochemical properties of SSB from Psychrobacter arcticus (ParSSB), we have cloned the ssb genes obtained by PCR and have developed Escherichia coli overexpression systems. The gene consists of an open reading frame of 642 nucleotides encoding SSB protein of 213 amino acids with a calculated molecular mass of 22.8 kDa. The amino-acid sequence of ParSSB exhibits 49% identity and 57% similarity to Escherichia coli SSB....
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Nowoczesne metody diagnostyki zakażeń dermatofitowych
PublicationGrzyby należące do rodzajów Microsporum, Trichophyton i Epidermophyton są główną przyczyną powierzchownych zakażeń grzybiczych. Klasyczna identyfikacja gatunkowa czynnika etiologicznego tych grzybic oparta na obserwacjach mikro- i makroskopowych możliwa jest dopiero po uzyskaniu czystej hodowli dermatofitów. W związku z powolnym tempem wzrostu jest ona możliwa po dwóch, trzech tygodniach po pobrania próbki. Molekularne metody diagnostyczne...
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Evaluation of possibilities in identification and susceptibility testing for Candida glabrata clinical isolates with the Integral System Yeast Plus (ISYP)
PublicationThe aim of this study was to evaluate possibilities of correct identification and susceptibility testing of C. glabrata clinical isolates with Integral System Yeast Plus (ISYP). For species identification, as the reference method, API Candida test and species-specific PCR reactions were used. The potential of antifungal susceptibility testing by the ISYP test was compared with the Sensititre Yeast One. Whilst the reference methods...
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The influence of different expression of CYP3A4 izoenzymes on metabolic pathway derivatives in human hepatoma cells
PublicationCelem przeprowadzonych badań było określenie różnic w metabolizmie pochodnych C-857 i C-1748 w komórkach ludzkiego nowotworu wątroby HepG2 oraz określenie wpływu na ich biotransformację w podwyższonej ekspresji izoenzymu CYP3A4 w tejże linii. Uzyskane wyniki wskazały, że związek C-857, jak również C-1748 metabolizuje w komórkach HepG2 oraz Hep3A4 do wielu reaktywnych, niestabilnych metabolitów. Różnice w biotransformacji były bardzo...
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Red Kale (Brassica oleracea L. ssp. acephala L. var. sabellica) Induces Apoptosis in Human Colorectal Cancer Cells In Vitro
PublicationThis article presents the results of studies investigating the effect of red kale (Brassica oleracea L. ssp. acephala L. var. sabellica) extract on cancer cells (HT-29). The cytotoxicity of the red kale extract was assessed using MTT and LDH assays, while qRT-PCR was employed to analyze the expression of genes associated with the p53 signaling pathway to elucidate the effect of the extract on cancer cells. Furthermore, HPLC-ESI-QTOF-MS/MS...
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Population-based case-control study of alpha 1-antitrypsin and SLC11A1 in Crohn's disease and ulcerative colitis.
PublicationBackground: Crohn’s disease (CD) and ulcerative colitis (UC) are chronic inflammatory diseases of the digestive tract. Genetic factors and an abnormal immune response to infections are suspected to be involved in inflammatory bowel diseases. Methods: In the present study 300 blood samples from CD patients (n 100), UC patients (n 100), and healthy controls (n 100) were taken from a population-based case-control study. PCR assays...