Search results for: PHYLOGENETIC TREE COMPARISON - Bridge of Knowledge

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Search results for: PHYLOGENETIC TREE COMPARISON

Search results for: PHYLOGENETIC TREE COMPARISON

  • Distinguishing views in symmetric networks: A tight lower bound

    Publication

    The view of a node in a port-labeled network is an infinite tree encoding all walks in the network originating from this node. We prove that for any integers n ≥ D ≥ 1, there exists a port-labeled network with at most n nodes and diameter at most D which contains a pair of nodes whose (infinite) views are different, but whose views truncated to depth Omega( D log(n/ D )) are identical.

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  • Komputerowo wspomagana klasyfikacja wybranych sygnałów elektromiografii powierzchniowej

    Wykorzystywanie sygnałów elektromiografii powierzchniowej (ang. Surface Electromyography, SEMG) w procesach sterowania systemami rehabilitacyjnymi stanowi obecnie standardową procedurę. Popularność SEMG wynika z nieinwazyjności metody oraz możliwości szybkiej i precyzyjnej identyfikacji funkcji mięśniowej. W przypadku osób małoletnich proces klasyfikacji sygnałów jest utrudniony ze względu na mniejsze rozmiary i wyższą dynamikę...

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  • Building Polish space sector – from small islands of excellence to a national innovation ecosystem

    Publication

    In the paper a national potential of Poland to build its space industry after joining the European Space Agency (ESA) in 2012 is assessed, based on the series of survey reports published annually by POLSA since 2016. Their methodology was based on the ESA technology tree, classifying all the space-related technical knowhow and allowed identification of the most promising strengths to exploit and shortages to challenge by policymakers...

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  • Minute and diverse in fossil sticky stuff: Tanytarsini (Diptera: Chironomidae) from early Eocene Indian Cambay amber

    Publication

    - ZOOLOGICAL JOURNAL OF THE LINNEAN SOCIETY - Year 2020

    We here present a pioneering systematic review of fossil dipterans of the tribe Tanytarsini (family Chironomidae) discovered in Indian amber from Cambay. The specimens examined belong to five species: Gujaratomyia miripes, Stempellina stebneri sp. nov., Stempellinella pollex sp. nov., Tanytarsus forfex sp. nov. and Tanytarsus ramus sp. nov., which are described. All species belong to the oldest known Tanytarsini and come from the...

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  • Comparative study on total nitrogen prediction in wastewater treatment 1 plant and effect of various feature selection methods on machine learning algorithms performance

    Publication

    - Journal of Water Process Engineering - Year 2021

    Wastewater characteristics prediction in wastewater treatment plants (WWTPs) is valuable and can reduce the number of sampling, energy, and cost. Feature Selection (FS) methods are used in the pre-processing section for enhancing the model performance. This study aims to evaluate the effect of seven different FS methods (filter, wrapper, and embedded methods) on enhancing the prediction accuracy for total nitrogen (TN) in the WWTP...

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  • Micoroalgae bloom detected in Southern Baltic Sea on 25.07.2014

    Open Research Data
    open access

    The GeoTIFF image presents detected microalgae bloom observed in the Baltic Sea on 25.07.2014. The image has been obtained from the raw AVHRR sensor bands 1 (0.58-0.68 μm) and 2 (0.725-1.0 μm). The resulting single-band raster has been masked to remove all pixels outside of the Baltic Sea region. Pixel values between -0.2 and -0.23 depict progressively...

  • Average price of a book in Poland (2010-2013)

    Open Research Data
    open access

    Although the Central Statistical Office does not provide detailed data on the growth rate of book prices, the overall comparison, which includes books, newspapers, magazines as well as drawing and painting articles, shows that the average annual price increase in 2011 amounted to 3.3% in this category. Moreover, as noted, the changes to the VAT Act...

  • Employment structure in individual enterprises in Poland in 2010-2014

    Open Research Data
    open access

    It is worth mentioning the role of micro, small and medium-sized enterprises in the labor market. The above-mentioned entities employ in total nearly 70% of all employees who work in the corporate sector. Micro enterprises play a decisive role in this respect, accounting for nearly 40% of all employees.Comparing the data contained in the table below...

  • The circle object detection with the use of Msplit estimation

    Publication

    - Year 2018

    The paper presents the use of Msplit(q) - estimation in the filtration and aggregation of point clouds containing a known number of elliptical shapes with preliminary unknown - locations and dimensions. These theoretical solutions may have practical relevance especially in the modelling of terrestrial laser scanning data of objects that have similar shape to circles. Mentioned shapes can be scanned of tree trunks, columns, gutters,...

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  • ITS1 and ITS2 sequences alignment of Oncidium Sw. species

    Open Research Data
    version 1.1 open access - series: Oncidium Sw. taxonomy

    Comparison of internal transcribed spacer ( ITS1; ITS2) sequences of 40 species of Oncidium S..w. Alignment was created using Clustal Omega  ver.1.2.4 in SnapGene software 7.1.1.   

  • Car wash water reuse

    Open Research Data
    open access

    The resistance of automotive coatings to washing water recovered in 50% and 70% from wastewater generated at car wash was tested. The wastewater was purified in the ultrafiltration process using tubular polyvinylidene fluoride membranes (100 and 200 kDa) manufactured by PCI company. The membranes retained oil contamination and over 50% of surfactants....

  • Objective Programming EMSS 2023

    e-Learning Courses
    • E. Lubecka

    Theory and practice on object oriented programmingSoftware programming paradigms including object oriented approachEncapsulation, inheritance, abstraction and polymorphism in C++ languageSpecific features of C++ obiect-orientationDynamic memory management in C++ languagePython as a scripting object oriented languageComparison of C++ and Python languages to Java and C#

  • Collision-Free Network Exploration

    Publication
    • J. Czyzowicz
    • D. Dereniowski
    • L. Gąsieniec
    • R. Klasing
    • A. Kosowski
    • D. Pająk

    - Year 2014

    A set of mobile agents is placed at different nodes of a n-node network. The agents synchronously move along the network edges in a collision-free way, i.e., in no round may two agents occupy the same node. In each round, an agent may choose to stay at its currently occupied node or to move to one of its neighbors. An agent has no knowledge of the number and initial positions of other agents. We are looking for the shortest possible...

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  • Environmental Role of Rime Chemistry at Selected Mountain Sites in Poland

    The results of field experiments on fog pollutantdeposition enhanced by local mountain climate, completed by thedendrochronological analysis of the forest response, are presentedin this paper. In spite of their low absolute altitude (1,000-1,600 ma.s.l), the Sudetes and the Silesian Beskid form a noticeable orographicbarrier for the airflow of the humid Atlantic air masses.This results in the increase of cloudiness and fog frequency...

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  • TWORZENIE MAP SIECI KOMPUTEROWYCH Z WYKORZYSTANIEM PROTOKOŁÓW TYPU LLDP

    Dla administratorów systemów sieciowych niezwykle istot-nym jest posiadanie narzędzia tworzącego dynamicznie mapę sieci do celów zarządzania, diagnostyki, zapobiegania awariom i włamaniom. Artykuł prezentuje protokoły wspierające tworzenie map sieci a także własne badania nad usprawnieniem istniejących algorytmów. Proponowane rozwiązania to: budowa map z użyciem protokołu LLDP i SNMP, odkrywanie wąskich gardeł w sieciach dzięki...

  • Investigation of continuous wave jamming in an IEEE 802.15.4 network

    Publication

    This paper presents how continuous wave jamming affects IEEE 802.15.4 network. To this end, an office-based measurement setup has been proposed. Within the measurement area, 25 nodes have been set up in order to create a IEEE 802.15.4 tree-based test network structure. A dedicated jamming device that generates and transmits a continuous wave signal has been developed. Several tests have been conducted and presented to demonstrate...

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  • X-Ray photoemission spectroscopy measurements of the Nb-V-Sr-O ceramics

    Open Research Data
    open access

    Niobium doped strontium vanadate based perovskite SrV1-xNbxO3-δ materials were prepared via conventional solid state reaction (SSR) method. For comparison, different samples with a various amount of niobium dopant in the structure were synthesized; x = 0; 0,2; 0,5; 0,8 and 1. Samples were sintered by two-steps: first under a pure hydrogen (purity >99.999%)...

  • Porównanie własności smarnych wody, emulsji oleju w wodzie typu HFA-E oraz oleju Total Azolla 46 jako czynników roboczych w układach hydraulicznych = Comparison of the lubricant property of water oil-in-water emulsion type HFA-E and oil total Azolla 46 as working liquids in hydraulic systems

    Publication

    - TRIBOLOGIA - Year 2009

    W artykule scharakteryzowano i opisano wyniki badań własności smarnych wody destylowanej, 1% emulsji oleju w wodzie typu HFA-E sporządzonej na bazie koncentratu do tworzenia emulsji Isosynth VH110BF, oleju Total Azolla 46 oraz, w celach porównawczych, samego koncentratu Isosynth VH110BF. Przedstawiono również wyniki badań powierzchniowego zużycia zmęczeniowego (pittingu), dla wyżej wymienionych czynników smarnych. Emulsja oleju...

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  • Jarosław Ziętarski dr

    Jarosław Ziętarski is a lecturer (PhD) in the Department of Finance at the Faculty of Management and Economics of the Gdańsk University of Technology. He has his own channel on the youtube platform called "FAT CAT Financial Education" where he popularizes knowledge in the field of management accounting. He was on the organizing committee of the 28th Annual Multinational Finance Society Conference. Courses taught: Introduction...

  • Vehicle classification based on soft computing algorithms

    Experiments and results regarding vehicle type classification are presented. Three classes of vehicles are recognized: sedans, vans and trucks. The system uses a non-calibrated traffic camera, therefore no direct vehicle dimensions are used. Various vehicle descriptors are tested, including those based on vehicle mask only and those based on vehicle images. The latter ones employ Speeded Up Robust Features (SURF) and gradient images...

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  • A graph coloring approach to scheduling of multiprocessor tasks on dedicated machines with availability constraints

    We address a generalization of the classical 1- and 2-processor unit execution time scheduling problem on dedicated machines. In our chromatic model of scheduling machines have non-simultaneous availability times and tasks have arbitrary release times and due dates. Also, the versatility of our approach makes it possible to generalize all known classical criteria of optimality. Under these stipulations we show that the problem...

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  • Weighted 2-sections and hypergraph reconstruction

    Publication

    In the paper we introduce the notion of weighted 2-sections of hypergraphs with integer weights and study the following hypergraph reconstruction problems: (1) Given a weighted graph , is there a hypergraph H such that is its weighted 2-section? (2) Given a weighted 2-section , find a hypergraph H such that is its weighted 2-section. We show that (1) is NP-hard even if G is a complete graph or integer weights w does not exceed...

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  • The Snow Team Problem

    Publication

    - Year 2017

    We study several problems of clearing subgraphs by mobile agents in digraphs. The agents can move only along directed walks of a digraph and, depending on the variant, their initial positions may be pre-specified. In general, for a given subset~$\cS$ of vertices of a digraph $D$ and a positive integer $k$, the objective is to determine whether there is a subgraph $H=(\cV_H,\cA_H)$ of $D$ such that (a) $\cS \subseteq \cV_H$, (b)...

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  • The impact of training and neurotrophins on functional recovery after spinal cord transection: cellular and molecular mechanisms contributing to motor improvement

    Beneficial effects of locomotor training on the functional recovery after complete transection of the spinal cord indicate that in chronic spinal animals spontaneous recovery processes are enhanced and shaped by the training. The mechanisms of that use-dependent improvement are still not fully understood. This review tackles three aspects of this issue: (1) neurochemical attributes of functional improvement...

  • Escherichia coli Strains with Virulent Factors Typical for Uropathogens were Isolated from Sinuses from Patients with Chronic Rhinosinusitis—Case Report

    Publication

    - Pathogens - Year 2020

    Escherichia coli were isolated from three patients with chronic rhinosinusitis (CRS) by intraoperative sinus tissue biopsy. Taking into account the unusual replicative niche and previous treatment failures, it was decided to focus on the virulence and drug resistance of these bacteria. The strains turned out to be multi-sensitive, but the rich virulence factors profile of bacteria typical for phylogenetic group B2 deserved attention....

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  • Defining a novel domain that provides an essential contribution to site-specific interaction of Rep protein with DNA

    Publication
    • K. Wegrzyn
    • E. Zabrocka
    • K. Bury
    • B. Tomiczek
    • M. Wieczór
    • J. Czub
    • U. Uciechowska
    • M. Moreno-del Alamo
    • U. Walkow
    • I. Grochowina... and 4 others

    - NUCLEIC ACIDS RESEARCH - Year 2021

    An essential feature of replication initiation proteins is their ability to bind to DNA. In this work, we describe a new domain that contributes to a replication initiator sequence-specific interaction with DNA. Applying biochemical assays and structure prediction methods coupled with DNA–protein crosslinking, mass spectrometry, and construction and analysis of mutant proteins, we identified that the replication initiator of the...

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  • Students and graduates of higher education institutions in 1990-2011 (with foreigners) in Poland

    Open Research Data
    open access

    In the last thirty years, there has been a spontaneous development of science and economy, with particular emphasis on the non-public education sector. It seems that the situation in the higher education market has now stabilized,with a slight downward trend in absolute terms.

  • Tellurite based glass doped by Eu3+ ions - XPS measurements

    Open Research Data
    open access

    Eu3+ doped tellurite glass ceramics containing SrF2 nanocrystals were prepared using melt quenching technique and subsequent heat treatment of glass in 370 °C for different time periods. Thermal properties of glass matrix have been determined based on DSC measurements. XRD and XPS results confirmed formation of SrF2 nanocrystals in glass matrices after...

  • New data acquisition system for birch sap concentrate production using the reverse osmosis technology

    The work presents a simple electronic device that helps to monitor the basic parameters of the reverse osmosis (RO) system during the concentration of birch tree sap. The construction costs are low (around 150 Euro) but the functionality of the device is high. It has an in-build two channel conductometer and can measure the volumetric flow rate of two streams of liquids. The collected data are transmitted wirelessly via Bluetooth...

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  • The Effect of Protrusions on the Initiation of Partial Discharges in XLPE High Voltage Cables

    Publication

    - Bulletin of the Polish Academy of Sciences-Technical Sciences - Year 2021

    This paper is focusing on 3D Finite Elements Analysis (FEA) based modelling of protrusions as defects or imperfections in the XLPE high voltage cable. This study is aiming to examine the impact protrusions have on the initiation of partial discharges. Spherical and ellipsoidal protrusions with different sizes at the conductor screen of the high voltage cable is an essential content of this paper. In addition, a spherical gas-filled...

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  • Limiting distribution of Lempel Ziv'78 redundancy

    Publication

    - Year 2011

    We show that the Lempel Ziv'78 redundancy rate tends to a Gaussian distribution for memoryless sources. We accomplish it by extending findings from our 1995 paper [3]. We present a new simplified proof of the Central Limit Theorem for the number of phrases in the LZ'78 algorithm. As in our 1995 paper, here we first analyze the asymptotic behavior of the total path length in a digital search tree (a DST) built from independent sequences....

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  • On the Limiting distribution of Lempel Ziv'78 Redundancy for Memoryles Sources

    Publication

    - Year 2014

    We show that the Lempel Ziv'78 redundancy rate tends to a Gaussian distribution for memoryless sources. We accomplish it by extending findings from our 1995 paper [3]. We present a new simplified proof of the Central Limit Theorem for the number of phrases in the LZ'78 algorithm. As in our 1995 paper, here we first analyze the asymptotic behavior of the total path length in a digital search tree (a DST) built from independent sequences....

  • Runoff Water

    Publication

    - Year 2013

    This entry summarizes the current state of knowledge on the role of atmospheric pollutants' transport to the surface and transformations of wet deposition on contact with various surfaces. Runoff waters are one of the forms in which precipitation reaches the groundwater and surface water. They are formed when rain or melting snow washes the surfaces of roofs, highways, agricultural areas, or tree canopies. Pollutants present in...

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  • Exploiting multi-interface networks: Connectivity and Cheapest Paths

    Publication

    - WIRELESS NETWORKS - Year 2010

    Let G = (V,E) be a graph which models a set of wireless devices (nodes V) that can communicate by means of multiple radio interfaces, according to proximity and common interfaces (edges E). The problem of switching on (activating) the minimum cost set of interfaces at the nodes in order to guarantee the coverage of G was recently studied. A connection is covered (activated) when the endpoints of the corresponding edge share at...

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  • Conversion of waste biomass into activated carbon and evaluation of environmental consequences using life cycle assessment

    Publication
    • M. Amin
    • H. H. Shah
    • A. Iqbal
    • M. Krawczuk
    • U. Z. R. Faroogi
    • A. Zia

    - Applied Sciences-Basel - Year 2022

    In this article, activated carbon was produced from Lantana camara and olive trees by H3PO4 chemical activation. The prepared activated carbons were analyzed by characterizations such as scanning electron microscopy, energy-dispersive X-ray spectroscopy, Brunauer–Emmett–Teller, X-ray diffraction, thermogravimetric analysis, and Fourier transform infrared spectroscopy. H3PO4 is used as an activator agent to create an abundant pore...

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  • OntoValidate: OntoNotes 5.0 NER validation dataset

    Open Research Data
    version 1.1 open access

    OntoValidate dataset consists of 603 randomly chosen raw textsfrom the original OntoNote 5.0 dataset (3637 raw texts in total).

  • Data obtained by computation for X-ray imaging of grating with magnification factor equal 2 using oriented Gaussian beams

    Open Research Data
    open access

    The propagation of X-ray waves through an optical system consisting of grating and X-ray refractive lenses is considered. In this approach, the propagating wave is represented as a superposition of the oriented Gaussian beams. The direction of wave propagation in each Gaussian beam is consistent with the local propagation direction of the X-ray wavefront.

  • Data obtained by computation for X-ray imaging of grating with magnification factor equal 4 using oriented Gaussian beams

    Open Research Data
    open access

    The propagation of X-ray waves through an optical system consisting of grating and X-ray refractive lenses is considered. In this approach, the propagating wave is represented as a superposition of the oriented Gaussian beams. The direction of wave propagation in each Gaussian beam is consistent with the local propagation direction of the X-ray wavefront.

  • Data obtained by computation for X-ray imaging of grating with magnification factor equal 8 using oriented Gaussian beams

    Open Research Data
    open access

    The propagation of X-ray waves through an optical system consisting of grating and X-ray refractive lenses is considered. In this approach, the propagating wave is represented as a superposition of the oriented Gaussian beams. The direction of wave propagation in each Gaussian beam is consistent with the local propagation direction of the X-ray wavefront.

  • Magdalena Szuflita-Żurawska

    Head of the Scientific and Technical Information Services at the Gdansk University of Technology Library and the Leader of the Open Science Competence Center. She is also a Plenipotentiary of the Rector of the Gdańsk University of Technology for open science.  She is a PhD Candidate. Her main areas of research and interests include research productivity, motivation, management of HEs, Open Access, Open Research Data, information...

  • Examining Classifiers Applied to Static Hand Gesture Recognition in Novel Sound Mixing System

    The main objective of the chapter is to present the methodology and results of examining various classifiers (Nearest Neighbor-like algorithm with non-nested generalization (NNge), Naive Bayes, C4.5 (J48), Random Tree, Random Forests, Artificial Neural Networks (Multilayer Perceptron), Support Vector Machine (SVM) used for static gesture recognition. A problem of effective gesture recognition is outlined in the context of the system...

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  • COMPARATIVE EVALUATION OF FERRITE SHIELDING DESIGNS IN INDUCTIVE POWER TRANSFER SYSTEMS

    Publication

    - Year 2019

    Wireless power transfer technology is becoming widespread in last few years. In comparison to conventional solutions this technology can significantly increase maintainability and safety of charging systems. From the other side there are list of factors that limit efficiency of wireless systems. One of them is low coupling between coils caused by comparably high leakage inductance in comparison to regular transformer.

  • Reconstruction of 3D structure of positive corona streamer by local methods

    Publication
    • M. Kocik
    • M. Tański
    • J. Mizeraczyk
    • R. Ichiki
    • S. Kanazawa
    • J. Dembski

    - Year 2009

    The computer algorithms were used for reconstruction of streamer 3D structure. We propose the 3D tree structure model of corona discharge streamer composed with nodes and edges between chosen couples of nodes, which enables easy computation of some important parameters ofstreamers. The 3D model can be derived directly from two projection images by global methods like evolutionary searching or particle simulations. In this paper...

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  • Dynamic ranking of cloud providers

    Publication

    - Year 2012

    The paper focuses on how to create an effective dynamic ranking service for IaaS,PaaS and SaaS cloud providers. It considers building of a quality model for thispurpose along with definition of quality measurement procedures. The paper discussesseveral techniques known from already existing price comparison engines that couldbe modified and adopted for comparison of cloud providers. Furthermore, a tech-nique for filtering measured...

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  • Clearing directed subgraphs by mobile agents

    Publication

    - JOURNAL OF COMPUTER AND SYSTEM SCIENCES - Year 2019

    We study several problems of clearing subgraphs by mobile agents in digraphs. The agents can move only along directed walks of a digraph and, depending on the variant, their initial positions may be pre-specified. In general, for a given subset S of vertices of a digraph D and a positive integer k, the objective is to determine whether there is a subgraph H=(V,A) of D such that (a) S is a subset of V, (b) H is the union of k directed...

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  • Estimation of the Ultimate Strength of FRP Strips-to-Masonry Substrates Bond

    Publication

    - Applied Sciences-Basel - Year 2023

    Fiber-Reinforced Polymers (FRP) were developed as a new method over the past decades due to their many beneficial mechanical properties, and they are commonly applied to strengthen masonry structures. In this paper, the Artificial Neural Network (ANN), K-fold Cross-Validation (KFCV) technique, Multivariate Adaptive Regression Spline (MARS) method, and M5 Model Tree (M5MT) method were utilized to predict the ultimate strength of...

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  • Culturable bacteria community development in postglacial soils of Ecology Glacier, King George Island, Antarctica

    Publication
    • M. K. Zdanowski
    • M. J. Żmuda-Baranowska
    • P. Borsuk
    • A. Świątecki
    • D. Górniak
    • D. Wolicka
    • K. M. Jankowska
    • J. Grzesiak

    - POLAR BIOLOGY - Year 2012

    Glacier forelands are excellent sites in which to study microbial succession because conditions change rapidly in the emerging soil. Development of the bacterial community was studied along two transects on lateral moraines of Ecology Glacier, King George Island, by culture-dependent and culture-independent approaches (denaturating gradient gel electrophoresis). Environmental conditions such as cryoturbation and soil composition...

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  • Measurement of Latency in the Android Audio Path

    Publication

    This paper provides a description of experimental investigations concerning comparison between the audio path characteristics of various Android versions. First, information about the changes in each system version in the context of latency caused by them is presented. Then, a measurement procedure employing available applications to measure latency is described comparing to results contained in the Internet. Finally, a comparison...

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  • Abdeslam Ennabili Prof.

    People

    Abdeslam Ennabili is Professor, Superior School of Technology, Sidi Mohamed Ben Abdellah University, Fes-Morocco (since 2004), Researcher and Senior Manager (1999-2003) and Assistant Project (1996-1999), Luxembourg University Foundation (FUL), Arlon- Belgium. He earned his PhD in Environmental Sciences (1999) at the FUL, becoming since 2004 the Department of Environmental Sciences and Management, Faculty of Sciences, University...

  • Biochemistry - Laboratory exercises - Nowy

    e-Learning Courses
    • P. Jakubek
    • Z. Koziara
    • A. Brillowska-Dąbrowska
    • I. Koss-Mikołajczyk

    Exerise 1. The ability to accumulate metal cations by edible mushrooms, comparison with edible plants Exercise 2. Measurement of activity of glutathione S-transferases - the detoxifying enzymes present in the cytosol of eukaryotic cells Exercise 3. Cell membranes permeability Exercise 4. Detection of mutagenic substances using Ames test Exercise 5. Gluten content in food products part 1. Exercise 6. Gluten content in food...