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Search results for: EPIGENETIC REMODELLING
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Design-oriented computationally-efficient feature-based surrogate modelling of multi-band antennas with nested kriging
PublicationDesign of modern antenna structures heavily depends on electromagnetic (EM) simulation tools. EM analysis provides reliable evaluation of increasingly complex designs but tends to be CPU intensive. When multiple simulations are needed (e.g., for parameters tuning), the aggregated simulation cost may become a serious bottleneck. As one possible way of mitigating the issue, the recent literature fosters utilization of faster representations,...
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Low-cost performance-driven modelling of compact microwave components with two-layer surrogates and gradient kriging
PublicationUtilization of electromagnetic (EM) simulation tools has become indispensable for reliable evaluation of microwave components. As the cost of an individual analysis may already be considerable, the computational overhead associated with EM-driven tasks that require massive simulations (e.g., optimization) may turn prohibitive. One of mitigation methods is the employment of equivalent network models. Yet, they are incapable of accounting...
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Sensitivity analysis based on non-intrusive regression-based polynomial chaos expansion for surgical mesh modelling
PublicationThe modelling of a system containing implants used in ventral hernia repair and human tissue suffers from many uncertainties. Thus, a probabilistic approach is needed. The goal of this study is to define an efficient numerical method to solve non-linear biomechanical models supporting the surgeon in decisions about ventral hernia repair. The model parameters are subject to substantial variability owing to, e.g., abdominal wall...
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Modelling of a medium-term dynamics in a shallow tidal sea, based on combined physical and neural network methods
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Combining Satellite Imagery and Numerical Modelling to Study the Occurrence of Warm Upwellings in the Southern Baltic Sea in Winter
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Heavy Duty Vehicle Fuel Consumption Modelling Based on Exploitation Data by Using Artificial Neural Networks
PublicationOne of the ways to improve the fuel economy of heavy duty trucks is to operate the combustion engine in its most efficient operating points. To do that, a mathematical model of the engine is required, which shows the relations between engine speed, torque and fuel consumption in transient states. In this paper, easy accessible exploitation data collected via CAN bus of the heavy duty truck were used to obtain a model of a diesel...
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Modelling of saturated, subcooled and post-dryout flow boiling with the energy dissipation based semi-empirical model
PublicationA comprehensive semi-empirical model for saturated, subcooled and post dryout heat transfer is presented based on considerations of energy dissipation in the flow. The fundamental hypothesis in the model is the fact that heat transfer during flow boiling can be treated as a sum of two contributions constituting the total energy dissipation in the flow, namely the energy dissipation due to the shearing flow without the bubbles and...
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Interaction Between Storm Water Conduit Flow and Overland Flow for Numerical Modelling of Urban Area Inundation
PublicationNowadays we can observe increasing frequency of inundations in cities. This makes accurate predicting of inundations more important than ever. Numerical modeling of this issue requires complex approach with simultaneous calculations of pipe flow and surface flow. In this paper, after a short review of known methods used for solving pipe and surface flow, we will try to answer the question if presented methods would be sufficiently...
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Flavonoids as tyrosinase inhibitors in in silico and in vitro models: basic framework of SAR using a statistical modelling approach
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A performance-oriented risk-based method for assessment of safety of ships. Modelling uncertainties in hazard and risk analysis
PublicationW artykule podano informacje na temat alternatywnej metody oceny bezpieczeństwa statków, opartej na ocenie zachowania się statku i ocenie ryzyka. Zaproponowano użycie metody do projektowania statków w oparciu o ocenę ryzyka. W takim podejściu do projektowania bezpieczeństwo powinno być celem projektowym. Ocena bezpieczeństwa w proponowanej metodzie powinna być dokonywana na podstawie oceny ryzyka. Do oceny ryzyka zastosowano elementy...
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Modelling the Kerf Angle, Roughness and Waviness of the Surface of Inconel 718 in an Abrasive Water Jet Cutting Process
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Alkali-activated slag supplemented with waste glass powder: Laboratory characterization, thermodynamic modelling and sustainability analysis
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The Reliability and Exploitation Analysis Method of the ICT System Power Supply with the Use of Modelling Based on Rough Sets
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Mechanical response of 6061-T6 aluminium alloy subjected to dynamic testing at low temperature: Experiment and modelling
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Modelling long-term technological transition of Polish power system using MARKAL: Emission trade impact
PublicationThe need for technological transition of electricity production becomes a global problem. However, in coal-dominated Polish power system this need is even more crucial than anywhere, since technical lifetime of the most domestic power plants is ending. In this paper, the impact of the EU Emission Trading Scheme (EU ETS) for CO2 combined with sulfur dioxide (SO2) and nitrogen oxides (NOx) emission trading mechanism on power technology...
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Derivation of the scaling laws used in geotechnical centrifuge modelling-application of dimensional analysis and Buckingham Π theorem
PublicationGeotechnical centrifuge modelling has been a world-wide used technology in physical tests. In this paper a derivation of scaling laws by dimensional analysis for the centrifugal modelling is presented. Basic principles of centrifuge modelling are described. Scaling laws for slow events like consolidation and fast events like dynamic loads are shown. The differences in scale factors for both processes are noticed. The aim of this...
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Modelling of the High Speed Multi-Pole Synchronous Generator for Application in More Electric Aircraft Power Systems
PublicationIn this paper different models of the synchronous generator are presented. The simulation results compared with the measurements are shown. Certain physical phenomena are included in described models for the porpoise of adequate analysis of the more electric aircraft power system. For different modelling levels, such as functional level or behavioural level, different physical phenomena have been included. Simulation results for...
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Evaluation and behaviour of slowly biodegradable substrate on mathematical modelling of oxygen uptake rate in activated sludge systems
PublicationThe effect of the readily biodegradable (Ss) fraction in activated sludge systems has been extensively investigated, but only minor information can be found about the effect of Xs on OUR in activated sludge systems. The aim of this study was to determine the evaluation and behaviour of Xs on mathematical modelling of OUR using ASM2d and its modification. The essential study was divided into two major parts: experimental investigation...
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Problems of modelling toxic compounds emitted by a marine internal combustion engine for the evaluation of its structure parameters
PublicationThe paper presents the possibility of using an analytical study of the engine exhaust ignition to evaluate the technical condition of the selected components. Software tools available for the analysis of experimental data commonly use multiple regression model that allows the study of the effects and iterations between model input quantities and one output variable. The use of multi-equation models gives a lot of freedom in the...
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Groundwater flow modelling of multi-aquifer systems for regional resources evaluation: the Gdansk hydogeological system, Poland
PublicationW celu oceny regionalnych zasobów gdańskiego systemu hydrogeologicznego zbudowano matematyczny model przepływu wód. Obszar badań objął około 2800 km2. Dane pozyskano z ponad 1700 otworów badawczych. Na podstawie modelu oszacowano zasoby dla wszystkich pieter wodonośnych: plejstoceńskiego, neogeńsko-paleogeńskiego i kredowego. Na podstawie analizy równania Bredehoef'a ustalono, że aktualna eksploatacja jest zbliżona do poziomu ''zrównoważonego...
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Risk Modelling with Bayesian Networks - Case Study: Construction of Tunnel under the Dead Vistula River in Gdansk
PublicationThe process of decision-making in public procurement of construction projects during the preparation and implementation phases ought to be supported by risk identification, assessment, and management. In risk assessment one has to take into account factors that lead to risk events (background info), as well as the information about the risk symptoms (monitoring info). Typically once the risks have been assessed a decision-maker...
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Effect of GIS parameters on modelling runoff from river basin. The case study of catchment in the Puck District
PublicationThe study was preceded to check the impact of the adopted digital elevation model resolution on the determination of catchment parameters and the further influence of the received information on calculations related to the hydrograph at the closing point of the basin after a synthetic 100-year precipitation episode. The study area are river basins located in the Puck commune convoying water directly to the Puck Bay. These studies...
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Sustainable nitrogen removal in anammox-mediated systems: Microbial metabolic pathways, operational conditions and mathematical modelling
PublicationAnammox-mediated systems have attracted considerable attention as alternative cost-effective technologies for sustainable nitrogen (N) removal from wastewater. This review comprehensively highlights the importance of understanding microbial metabolism in anammox-mediated systems under crucial operation parameters, indicating the potentially wide applications for the sustainable treatment of N-containing wastewater. The partial...
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Modelling of reinforced concrete beams under mixed shear-tension failure with different continuous FE approaches
PublicationW artykule omówiono wyniki modelowania numerycznego MES zachowania się wysokich belek żelbetowych podczas zniszczenia mieszanego ścinanie-rozciąganie. Obliczenia wykonano stosując różne modele dla betonu rozszerzone o długość charakterystyczną mikrostruktury w oparciu o teorie nielokalna. Otrzymano dobrą zgodność z wynikami doświadczalnymi.
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Modelling reinforced concrete beams under mixed shear-tension failure with different continuous FE approaches
PublicationThe paper presents quasi-static numerical simulations of the behaviour of short reinforced concrete beams without shear reinforcement under mixed shear-tension failure using the FEM and four various constitutive continuum models for concrete. First, an isotropic elasto-plastic model with a Drucker-Prager criterion defined in compression and with a Rankine criterion defined in tension was used. Next, an anisotropic smeared crack...
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FE-modelling of concrete behaviour under mixed mode conditions with non-local and cohesive constitutive models.
PublicationW artykule przedstawiono wyniki symulacji rys zaokrąglonych w elementach betonowych w warunkach mieszanego sposobu obciążenia. Symulacje wykonano przy zastosowaniu modelu rys kohezyjnych i modeli mechaniki ośrodka ciągłego z nielokalnym osłabieniem.. Wyniki symulacji porównano z doświadczeniami.
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Micro-modelling of shear localization during quasi-static confined granular flow in silos using DEM
PublicationThe paper deals with the quasi-static confined flow of cohesionless sand in a plane strain model silo with parallel walls and a slowly movable bottom. Numerical modelling was carried out by the discrete element method (DEM) using spheres with contact moments to approximately capture a non-uniform shape of sand particles. Different initial void ratios of sand and silo wall roughness grades were employed. Regular triangular grooves...
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Modelling of Capillary Pressure-driven Water Flow in Unsaturated Concrete Using Coupled DEM/CFD Approach.
PublicationSformułowano nowatorskie, połączone podejście do modelowania dwufazowego przepływu wody napędzanego kapilarami w nienasyconym betonie. Dzięki połączeniu metody elementów dyskretnych (DEM) z obliczeniową dynamiką płynów (CFD) w warunkach izotermicznych proces został zbadany numerycznie w mezoskali w warunkach dwuwymiarowych. Niewielkie próbki betonu o uproszczonej mezostrukturze cząstek poddano w pełni sprzężonym hydromechanicznym...
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Genome-Wide DNA Methylation and Gene Expression in Patients with Indolent Systemic Mastocytosis
PublicationMastocytosis is a clinically heterogenous, usually acquired disease of the mast cells with a survival time that depends on the time of onset. It ranges from skin-limited to systemic disease, including indolent and more aggressive variants. The presence of the oncogenic KIT p. D816V gene somatic mutation is a crucial element in the pathogenesis. However, further epigenetic regulation may also affect the expression of genes that...
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Late Aortic Remodeling after Endovascular Repair of Complicated Type B Aortic Dissection—TEVAR Protects Only the Covered Segment of Thoracic Aorta
PublicationIntroduction: TEVAR is the preferred way of treatment of complicated type B aortic dissection. The purpose of the study was to assess the impact of TEVAR on aortic remodelling in the thoracic and abdominal segment in long-term follow-up. Methods: 23 patients with complicated type B aortic dissection were treated by TEVAR in years 2004-2012 in our Department. Aortic remodelling was rated based on preoperative and final follow-up...
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Marek Kubale prof. dr hab. inż.
PeopleDetails concerning: Qualifications, Experiences, Editorial boards, Ph.D. theses supervised, Books, and Recent articles can be found at http://eti.pg.edu.pl/katedra-algorytmow-i-modelowania-systemow/Marek_KubaleGoogle ScholarSylwetka prof. Marka Kubalego Prof. Marek Kubale pracuje na Wydziale ETI Politechniki Gdańskiej nieprzerwanie od roku 1969. W tym czasie napisał ponad 150 prac naukowych, w tym ponad 40 z listy JCR. Ponadto...
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Low-cost data-driven modelling of microwave components using domain confinement and PCA-based dimensionality reduction
PublicationFast data-driven surrogate models can be employed as replacements of computationally demanding full-wave electromagnetic simulations to facilitate the microwave design procedures. Unfortunately, practical application of surrogate modelling is often hindered by the curse of dimensionality and/or considerable nonlinearity of the component characteristics. This paper proposes a simple yet reliable approach to cost-efficient modelling...
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Integrated plant-wide modelling for evaluation of the energy balance and greenhouse gas footprint in large wastewater treatment plants
PublicationModern wastewater treatment plants (WWTPs) should maintain a balance between three combined sustainability criteria, including effluent quality, energy performance and greenhouse gas (GHG) emissions. All of these criteria were considered in the integrated plant-wide model developed in this study. The proposed model incorporates new features, including: (i) the addition of associated facilities to the overall energy balance and...
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Modelling charge transfer processes in C2+ -tetrahydrofuran collision for ion-induced radiation damage in DNA building blocks
PublicationInvestigations of collision-induced processes involving carbon ions and molecules of biological interest in particular DNA building blocks, are crucial to model the effect of radiation on cells in order to improve medical treatments for cancer therapy. Using carbon ions appears to be one of the most efficient ways to increase biological effectiveness to damage cancerous cells by irradiating deep-seated tumors. Therefore, interest...
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Modelling of Ship’s Heeling and Rolling for the Purpose of Gantry Control Improvement in the Course of Cargo Handling Operations in Sea Ports
PublicationThe paper presents two proposals of models of interaction between a ship and cargo being loaded or discharged by a gantry in port, in terms of heeling and rolling of the vessel. The main purpose of such modelling is the need for improvement of gantry control with regard to faster operations thanks to more accurate estimation of level and moment of cargo release from a gantry hook or spreader. The study may be the contribution to...
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Estimation of Potential Leakage from Dumped Chemical Munitions in the Baltic Sea Based on Two Different Modelling Approaches
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Modelling relation between oxidation resistance and tribological properties of non-toxic lubricants with the use of artificial neural networks
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Modelling assisted phytoremediation of soils contaminated with heavy metals – Main opportunities, limitations, decision making and future prospects
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Application of reversed-phase thin layer chromatography and QSRR modelling for prediction of protein binding of selected β-blockers
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Modelowanie procesów migracji zanieczyszczeń organicznych w środowisku wodnym = Modelling of migration of organic xenobiotics in aquatic environment
PublicationPrzedstawiono zagadnienia związane z modelowaniem migracji związków chemicznych w środowisku. Zamieszczono także sposób konstruowania modeli i przegląd najważniejszych typów modeli migracji wraz z przykładami oraz wyniki, jakie można uzyskać za pomocą poszczególnych grup modeli. W pracy zawarto również podział modeli migracji ze względu na sposób przedstawienia transportu zanieczyszczeń, poziom kompilacji i zakres obszaru modelowania....
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Modelling and experimental investigation of the phenomenon of brekdown of the liquid layer formed by an impinging two-phase air-water jet
PublicationW pracy przedstawiono analizę teoretyczną i badania eksperymentalne badania zjawiska rozrywania warstwy cieczy powstałej z uderzającej strugi
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Micelle-bound conformations of neurohypophyseal hormone analogues modified with a Cα-disubstituted residue: NMR and molecular modelling studies
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Conformational studies of vasopressin and mesotocin using NMR spectroscopy and molecular modelling methods. Part I: studies in water
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Modelling the impact of the agricultural holdings and land-use structure on the quality of inland and coastal waters with an innovative and interdisciplinary toolkit
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Least square spline modelling along with tin decimation for 3D seafloor mapping from multibeam sonar data.
PublicationPrzedstawiono wyniki prac związane z zastosowaniem algorytmu aproksymacyjnego minimalnokwadratowego do wizualizacji danych wysokorozdzielczych pochodzących z sonaru wielowiązkowego. Metoda pozwala na redukcję danych oraz łatwą ich modyfikację.
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Modelling of high temperature air/steam gasification of biomassand solid wastes in view of hydrogen-rich gas production
PublicationPrzedstawiono zaawansowane technologie produkcji gazu bogatego w wodór z biomasy i odpadów komunalnych. Przeprowadzono badania eksperymentalne na stanowisku pomiarowym wykonanym w skali półprzemysłowej. Otrzymano obiecujące rezultaty podczas zgazowania palet drewnianych gazem o różnej zawartości pary wodnej.
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Volterra series usefulness in modelling of the time-domain cross-talk phenomena in coupled microstrip lines with nonlinear termination
PublicationW pracy przedyskutowano możliwość wykorzystania szeregów Volterry do analizy zjawiska przesłuchu w sprzężonych liniach mikropaskowych z nieliniowym obciążeniem. Apracowano algorytm metody, zaś uzyskane wyniki numeryczne zweryfikowano poprzez porównania z wynikami badań eksperymentalnych linii obciążonych w torze transmisyjnym diodą Schottky'ego.
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Physical aspect of application and usefulness of semi-Markovian processes for modelling the processes occurring in operational phase of technical objects.
PublicationW artykule zasygnalizowano przydatność teorii procesów semimarkowskich do tworzenia modeli procesów rzeczywistych, zachodzących w fazie eksploatacji różnych obiektów technicznych. Przydatność tej teorii została wykazana w wyniku przedstawienia: specyfiki procesów semimarkowskich oraz fizykalnych aspektów stosowania procesów semimarkowskich jako modeli procesów zachodzących w fazie eksploatacji wspomnianych obiektów. Specyfika została...
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Molecular modelling of transition state analogue inhibitors of glucosamine-6-P synthase and glucose-6-P isomerase.
PublicationStruktura kompleksu 2-amino-2-deoksy-D-glucitolo-6-P (ADGP) z centrum aktywnym syntazy GlcN-6-P z E. coli została wykorzystAna jako punkt wyjścia do modelowania molekularnego analogów ADGP. Używając programu GROMOS96 wygenerowano konformacje analogów o najniższych energiach wewnętrznych, które następnie ''dokowano'' w centrum aktywnym enzymu. Dokonano syntezy wybranych związków i określono parametry kinetyczne i termodynamiczne...
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Modelling the impact of the agricultural holdings and land-use structure on the quality of inland and coastal waters with an innovative and interdisciplinary toolkit
PublicationThe changes taking place in the marine coastal zones are extremely important, as about 40% of the human population currently lives in the coastal areas (within 100 kilometres of the coastline) increasing anthropogenic pressure on the marine ecosystems. Agriculture is a significant source of nutrients to the marine environment that increase hypoxia, eutrophication and may pose a threat to the services provided by ecosystems. In...