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Search results for: DECISIONAL DNA, VIRTUAL ENGINEERING FACTORY (VEF), VIRTUAL ENGINEERING OBJECT (VEO), VIRTUAL ENGINEERING PROCESS (VEP)
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32P-postabeling detection of DNA adducts formed by 4-methyl-1-nitro-9-aminoacridine C-1748
PublicationWykazano zdolność do tworzenia przez nową pochodną 1-nitroakrydyny o symbolu C-1748, adduktów z DNA komórek nowotworowych oraz z DNA w systemie bezkomórkowym.
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Low-energy positron scattering from DNA nucleobases: the effects from permanent dipoles
PublicationAb initio quantum calculations for low-energy positron scattering from gas-phase isolated molecular nucleobases which are part of the DNA structure are presented and discussed over the range of 1 eV to 25 eV. The calculations report the integral cross sections (ICSs) and the momentum-transfer cross sections (MTCSs) for Adenine, Guanine, Thymine and Cytosine. The calculations show very clearly the important role of the dominant...
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The Product of Matrix Metalloproteinase Cleavage of Doxorubicin Conjugate for Anticancer Drug Delivery: Calorimetric, Spectroscopic, and Molecular Dynamics Studies on Peptide–Doxorubicin Binding to DNA
PublicationMatrix metalloproteinases (MMPs) are extracellular matrix degradation factors, promoting cancer progression. Hence, they could provide an enzyme-assisted delivery of doxorubicin (DOX) in cancer treatment. In the current study, the intercalation process of DOX and tetrapeptide-DOX, the product of the MMPs' cleavage of carrier-linked DOX, into dsDNA was investigated using stationary and time-resolved fluorescence spectroscopy, UV-Vis...
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Protection of bridges against stray current corrosion
PublicationA case study of Siennicki Bridge stray current corrosion hazard is presented. A corrosion risk was caused by incorrectly designed tram line traction which goes over the bridge. No dielectric insulation between running rails and bridge steel construction was used. A variety of protection methods against stray currents are described. Characteristics of the endangered bridge were described. Impressed current cathodic protection system...
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Ship domain applied to determining distances for collision avoidance manoeuvres in give-way situations
PublicationShip domain is often used in marine navigation and marine traffic engineering as a safety condition. The basic idea behind those applications is that an encounter of two or more ships can be considered safe if neither of ship domains is intruded by other ships. Research utilising this approach has been documented in numerous works, including publications on optimising collision avoidance manoeuvres performed to fulfil domain-based...
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Cross sections for electron scattering from selected components of DNA and RNA
PublicationWykorzystując metodę atomów niezależnych obliczono różniczkowe i całkowite przekroje czynne na sprężyste rozproszenie elektronów na wybranych drobinach, będących analogami składników DNA i RNA. Przekroje te obliczono w zakresie energii zderzenia od 50eV do 200 eV dla następujących drobin: C4H8O, C4H8O2, C5H10O2 oraz H3PO4. Przy użyciu metody BEB (binary-ecounter Bethe method) dla powyższych związków obliczono również przekroje...
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Novel single-stranded DNA-binding protein from psyvhrophilic bacterium Psychrobacter arcticus
PublicationTo study the biochemical properties of SSB from Psychrobacter arcticus (ParSSB), we have cloned the ssb genes obtained by PCR and have developed Escherichia coli overexpression systems. The gene consists of an open reading frame of 642 nucleotides encoding SSB protein of 213 amino acids with a calculated molecular mass of 22.8 kDa. The amino-acid sequence of ParSSB exhibits 49% identity and 57% similarity to Escherichia coli SSB....
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Study of the process of tool forming made of high-strength materials
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Meta-Design and the Triple Learning Organization in Architectural Design Process
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Determining horizontal curvature of railway track axis in mobile satellite measurements
PublicationThe article discusses the applicability of a novel method to determine horizontal curvature of the railway track axis based on results of mobile satellite measurements. The method is based on inclination angle changes of a moving chord in the Cartesian coordinate system. In the presented case, the variant referred to as the method of two virtual chords is applied which consists in manoeuvring with only one GNSS (Global Navigation...
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DNA Methylation Changes Induced by Redox-Active Compounds—Choosing the Right PCR-Based Method
PublicationThe impact of catechins on the expression profile of redox-related genes in HT29 cell line has been studied recently by our group using Oxidative Stress RT2 Profiler PCR Array. Within the examined panel of 84 genes, the down-regulation of SRXN1 gene was unique among other up-regulated genes. We hypothesized that the observed down-regulation resulted from DNA methylation and have exploited this observation to choose the proper strategy...
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Urban Prototyping in CAVE Cooperation Between the Academy of Fine Arts in Gdansk and the Gdansk University of Technology
PublicationThe paper describes results of cooperation between the Passive Architecture Laboratory at the Academy of Fine Arts in Gdańsk and the Immersive 3D Visualization Lab at the Gdańsk University of Technology. The authors as the design supervisors (respectively for a team of architects and a team of IT specialists) present advantages and disadvantages of urban design with use of virtual reality.
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Unlocking creativity with new technologies
PublicationArtificial intelligence, augmented and virtual reality, Internet of Things and digital twins are just a few concepts related to the fourth industrial revolution that is happening right before our eyes. The key question asked by managers in the aerosol sector recently is: what does all this new technology mean to me?
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Electrochemical formation of the adduct between antitumor agent C_1311 and DNA nucleoside dG. 75.
PublicationPrzyjmuje się, że metaboliczna aktywacja przeciwnowotworowej pochodnej C_1311 jest procesem koniecznym dla jej aktywności przeciwnowotworowej. Wykazano wcześniej, że taka aktywacja prowadzi do kowalencyjnego wiązania się leku z DNA w komórce nowotworowej. Aby zbadać molekularny mechanizm powyższej reakcji metabolicznej przeprowadzono badania elektrochemicznego utleniania pochodnej C_1311. Wykazano w pracy, że dwa produkty elektrochemicznego...
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The role of low-energy electrons in the charging process of LISA test masses
PublicationThe estimate of the total electron yield is fundamental for our understanding of the test-mass charging associated with cosmic rays in the Laser Interferometer Space Antenna (LISA) Pathfinder mission and in the forthcoming gravitational wave observatory LISA. To unveil the role of low energy electrons in this process owing to galactic and solar energetic particle events, in this work we study the interaction of keV and sub-keV...
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Levels of creativity in architectural education
PublicationArchitectural design combines engineering science and art, thus stimulating creativity is a challenge in the didactic process. There are various levels of creativity that can be attained through architectural education. From idea to architecture (FITA) is a teaching method based on metaphorical and analogical reasoning that was developed, implemented and tested during architectural design classes in the Faculty of Architecture...
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Low cost real time UAV stereo photogrammetry modelling technique – accuracy considerations
PublicationThe paper presents accuracy considerations regarding three 3D modelling techniques. The tested new consumer type stereo camera (ZED 3D Stereolabs) has been implemented info an aerial mapping system, on board micro air vehicle MAV) and tested object has been mapped using a real-time photogrammetry with original real-time software application. The evaluated results has been compared with model gained with a state of art unmanned...
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Process Control and Investigation of Oxidation Kinetics of Postoxidative Effluents Using Gas Chromatography with Pulsed Flame Photometric Detection (GC-PFPD)
PublicationThis article presents the results of investigations on the use of headspace analysis and gas chromatography with pulsed flame photometric detection (HSA-GC-PFPD) to evaluate the effectiveness of oxidation of postoxidative effluents from the production of bitumens. Samples of effluents from the bitumen oxidation unit were used in the experiments. In addition, the kinetics of effluent oxidation was also investigated. The content...
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Performance evaluation of the parallel object tracking algorithm employing the particle filter
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OF-FEMEA: an approach to safety analysis of object oriented software intensive systems.
PublicationArtykuł przedstawia rozszerzenie metody FMEA znanej z jej zastosowań w stosunku do systemów związanych z bezpieczeństwem, w sposób umożliwiający jej stosowanie do systemów zawierających oprogramowanie i budowanych zgodnie z podejściem obiektowym. Punktem wyjścia dla metody są modele współpracy wyrażone w notacji UML. Komponenty systemu są modelowane z zastosowaniem notacji formalnej CSP. Metoda wspomaga systematyczną identyfikacje...
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Evolutionary - fuzzy hybrid system of steering the moveable object in dynamic environment
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The Body as an Object of Stigmatization in Cultures of Guilt and Shame: A Polish–Vietnamese Comparison
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Modular machine learning system for training object detection algorithms on a supercomputer
PublicationW pracy zaprezentowano architekturę systemu służącego do tworzenia algorytmów wykorzystujących metodę AdaBoost i służących do wykrywania obiektów (np. twarzy) na obrazach. System został podzielony na wyspecjalizowane moduły w celu umożliwienia łatwej rozbudowy i efektywnego zrównoleglenia implementacji przeznaczonej dla superkomputera. Na przykład, system może być rozszerzony o nowe cechy i algorytmy ich ekstrakcji bez konieczności...
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EXPERIMENTAL ANALYSIS OF CONNECTION BETWEEN OBJECT-ORIENTED METRICS AND SOFTWARE CHANGEABILITY
PublicationFor the purpose of video surveillance software quality assessment in this work the ISO/IEC-9126 norm was used with a particular focus on maintainability of the software system. The paper presents a study on the connection between software metrics derived from the static analysis of the source code and changeability of the video surveillance software system. It is shown that meeting requirements of software quality metrics may result...
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A family of new generation miniaturized impedance analyzers for technical object diagnostics
PublicationThe paper presents the family of three analyzers allowing to measure impedance in range of 10 ohm<|Zx|<10 Gohm in a wide frequency range from 10 mHz up to 100 kHz. The most important features of the analyzers family are: miniaturization, low power consumption, low production cost, telemetric controlling and the use of impedance measurement method based on digital signal processing DSP. The miniaturization and other above mentioned...
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Assessing business process complexity based on textual data: Evidence from ITIL IT ticket processing
PublicationPurpose This study aims to draw the attention of business process management (BPM) research and practice to the textual data generated in the processes and the potential of meaningful insights extraction. The authors apply standard natural language processing (NLP) approaches to gain valuable knowledge in the form of business process (BP) complexity concept suggested in the study. It is built on the objective, subjective and meta-knowledge...
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Opinia na temat wpływu budowanego w ciągu drogi S7 mostu przez Wisłę w Kiezmarku na kształtowanie hydrodynamiki przepływu wód i rozmycia dna w warunkach umocnienia dna w rejonie podpór nurtowych
PublicationCelem pracy było wykonanie obliczeń hydraulicznych i hydrologicznych sprawdzających wpływ budowy w korycie głównym Wisły podpór nurtowych nr 10 i 11 wraz z wariantowymi umocnieniami dna i filarów mostu drogowego budowanego w Kiezmarku na dynamikę przepływu wody w rzece i erozję dna Wisły w przekroju mostowym.
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Building Information Modeling in Small and Middle Sized Buildings – Case Study
PublicationBuilding Information Modeling (BIM) is a technology designed to improve and integrate all engineering aspects in the construction design process. Tools that incorporate the idea of BIM are becoming more advanced and also more popular. Available software solutions have already reached an assumable high level of development, but still are not as widespread and used on nearly as many construction projects as could be expected. Therefore...
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Zastosowania metodyki Kansei do doskonalenia interfejsów oprogramowania wykorzystywanego w telepracy
PublicationArtykuł przedstawia możliwości wykorzystania metodyki Kansei Engineering do projektowania ulepszeń interfejsów oprogramowania wykorzystywanego w prowadzeniu telepracy. W artykule zostały zaprezentowane: podstawy metodyki Kansei Engineering, informacje o telepracy oraz podstawowe zagadnienia związane z projektowaniem interfejsów oprogramowania.
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Differences in sequences between HBV-relaxed circular DNA and covalently closed circular DNA
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ECT image analysis methods for shear zone measurements during silo discharging process
PublicationW pracy przedstawiono wyniki pomiarów zmian koncentracji piasku bezkohezyjnego zachodzących w cylindrycznym modelu silosu opróżnianym grawitacyjnie, w którym występowały silne efekty dynamiczne. Pomiary wykonano z zastosowaniem tomografii pojemnościowej. Badania przeprowadzono dla zróżnicowanego zagęszczenia początkowego piasku oraz różnego stopnia szorstkości ścian. Szczegółowej analizie poddano zmianę koncentracji materiału sypkiego...
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Paradygmat informacyjny projektowania systemów wytwórczych nowej generacji
PublicationW niniejszym rozdziale pokazano informacyjny paradygmat projektowania i eksploatacji elastycznych systemów produkcyjnych na przykładzie róznych modeli systemów nowej generacji NGMS (Next Generation Manufacturing System). Na bazie modeli BMS (Bionc Manufacturing System)HMS (Holonie Manufacturing System), FFMS (Fraktal Factory Maufacturing System) dokonano analizy porównawczej wybranych rozwiązań w przedmiotowym obszarze, formułując...
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Quantification of Radiation-Induced Single-Strand Breaks in Plasmid DNA using a TUNEL/ELISA-Based Assay
PublicationWprowadzono nową metodę służącą do oznaczania in vitro pojedynczych pęknięć nici DNA powstałych pod wpływem naświetlań. Porównano wyniki otrzymane z nowej metody z modelem teoretycznym. Porównano wyniki z szeroko używaną metodą elektroforezy żelowej. Pokazano, że poziom pojedynczych pęknięć powstających w niciach DNA pod wpływem promieniowania VUV jest wyższy niż zakładany na podstawie wyników otrzymywanych metodami standardowymi.
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Electricity Supplier Switching Process in Poland – a Process Based on the General Distribution Agreement
PublicationPoland, as a Member State of the European Union, is committed to respect the common rules on the electricity market, among other things. One of the most important examples of these regulations is the perception of energy as a commodity subject to competitive market mechanisms. Competitive processes introduced in the national electricity market enable energy consumers, i.a., choice of electricity supplier under the TPA formula....
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The extended version of restriction analysis approach for the examination of the ability of low-molecular-weight compounds to modify DNA in a cell-free system
PublicationOne of the primary requirements in toxicology is the assessment of ability of chemicals to induce DNA covalent modification. There are several well-established methods used for this purpose such as 32P-Postlabeling or HPLC-MS. However, all of these approaches have difficult to overcome limitations, which prevents their use in genotoxin screening. Here, we describe the simple protocol exploiting specificity of restriction enzymes...
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Wczesne modele opisujące uszkodzenia nici DNA pod wpływem działania czynników chemicznych oraz promieniowania
PublicationOd wielu lat kwantyfikacja uszkodzeń DNA, wywołanych przez różne rodzaje promieniowania korpuskularno-falowego, jak i związków chemicznych, jest przedmiotem szerokich badań teoretycznych i eksperymentalnych. Badania te, mając na celu szczegółowe i dogłębne poznanie mechanizmów powstawania uszkodzeń wspomagają jednocześnie rozwój nowoczesnych terapii nowotworowych. Wstępne pomiary wykazały, że wiele z tych czynników może prowadzić...
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Study on VR Application Efficiency of Selected Android OS Mobile Devices
PublicationCurrently, the number of scenarios for using VR (Virtual Reality) technology grows every year. Yet, there are still issues associated with it, related with the performance of the mobile device itself. The aim of this work is to perform an analysis of the effectiveness of virtual reality applications in case of mobile platforms. We put the main emphasis on examining the performance and efficiency of four different hardware and software...
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Novel anticancer strategy aimed at targeting shelterin complexes by the induction of structural changes in telomeric DNA: hitting two birds with one stone.
PublicationThe ends of chromosomes in mammals are composed of telomeric DNA containing TTAGGG repeats, which bind specific proteins called shelterins. This telomeric DNA together with shelterins form a cap that protects the ends of chromosomes from being recognized as sites of DNA damage and from chromosomal fusions. Many very successful antitumor drugs used in the treatment of cancer patients bind to DNA, some of them with a prominent sequence...
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Evaluation of a novel method based on amplification of DNA fragments surrounding rare restriction sites (ADSRRS-figerprinting) for typing strains of vancomycin resistant Enterococcus faecium.
PublicationBadania objęły wankomycyno oporne szczepy Enterococcus faecium izolowane od pacjentów oddziału Hematologii Szpitala Klinicznego w Gdańsku. Wykazano, że ADSRRS-fingerprinting jest metodą szybką o dużym potencjale różnicującym i dużej powtarzalności w badaniach epidemiologicznych.
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Increased resonance energy transfer between fluorophores bound to DNA in proximity to metallic silver particles.
PublicationZbadano wpływ nanocząstek metalicznego srebra na rezonansowe przekazywanie energii między fluoroforami związanymi z DNA. Donor (pochodna kumaryny) i akceptor (Cy3) umieszczono na przeciwległych końcach DNA o strukturze podwójnej helisy i o 23 parach bazowych. W nieobecności cząstek srebra wydajność przekazywania energii w tym układzie wynosiła ok. 9%, zaś po umieszczeniu go między kwarcowymi płytkami pokrytymi filmem wysepek...
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Management Information Base module for electrical power system configuration and use
PublicationInternet standards describe a virtual information store, termed the Management Information Base (MIB), which is made available through Simple Network Management Protocol (SNMP). No standard MIB exists to date for monitoring power lines in facilities over IP network. This paper defines a subset of the MIB for power system monitoring.
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Real-Time connection Between Immerse 3D Vizualization Laboratory and Kaskada Platform
PublicationMultimedia stream processing into two cooperative different systems (cluster platform and virtual lab) is considered. The considered selected information about the systems is presented and the idea of its communication when executing the distributed application is proposed. A general schema of the communication architecture is given. Tests of data transmission quality are considered and their results are presented.
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Changes in Epigenetic Patterns Related to DNA Replication in Vicia faba Root Meristem Cells under Cadmium-Induced Stress Conditions
PublicationExperiments on Vicia faba root meristem cells exposed to 150 µM cadmium chloride (CdCl2) were undertaken to analyse epigenetic changes, mainly with respect to DNA replication stress. Histone modifications examined by means of immunofluorescence labeling included: (1) acetylation of histone H3 on lysine 56 (H3K56Ac), involved in transcription, S phase, and response to DNA damage during DNA biosynthesis; (2) dimethylation of histone...
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Genome-wide DNA methylation profiling of the regenerative MRL/MpJ mouse and two normal strains
PublicationAims We aimed to identify the pivotal differences in the DNA methylation profiles between the regeneration capable MRL/MpJ mouse and reference mouse strains. Materials and Methods Global DNA methylation profiling was performed in ear pinnae, bone marrow, spleen, liver, heart from uninjured adult females of the MRL/MpJ and C57BL/6J and BALB/c. Results and conclusion A number of differentially methylated regions distinguishing between...
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3D Object Shape Reconstruction from Underwater Multibeam Data and Over Ground Lidar Scanning
PublicationThe technologies of sonar and laser scanning are an efficient and widely used source of spatial information with regards to underwater and over ground environment respectively. The measurement data are usually available in the form of groups of separate points located irregularly in three-dimensional space, known as point clouds. This data model has known disadvantages, therefore in many applications a different form of representation,...
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Induction of immune responses in sheep by vaccination with liposome-entrapped DNA complexes encoding Toxoplasma gondii MIC3 gene
PublicationToxoplasma gondii is a parasite that has been extensively studied due to its medical and veterinary importance in terminating pregnancies. Consequently, a satisfactory vaccine is required to control itsadverse effects on pregnant animals. The microneme protein, MIC3, is a major adhesion protein that binds to the surface of host cells and parasites, and is therefore a potential vaccine against T. gondii.The viability of MIC3 as...
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Novel DNA-binding protein from Nanoarchaeum equitans Kin4-M binds all kinds of nucleic acids
PublicationNanoarchaeum equitans is the only known representative of Archaea phylum Nanoarchaeota and stands out as one of the tiniest known living organism. What is more it has smallest genome, which is only 490.885 base pairs long. It is also one of the most compact genomes. According to predictions about 95% of the DNA encodes proteins or stable RNA. Nanoarchaeum equitans lacks genes for most vital metabolic pathways including lipid, cofactor,...
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Active Kriging-based conjugate first-order reliability method for highly efficient structural reliability analysis using resample strategy
PublicationEfficient structural reliability analysis method is crucial to solving reliability analysis of complex structural problems. High-computational cost and low-failure probability problems greatly limit the efficiency in structural reliability analysis problems, causing the safety and reliability of the structure to be questioned. In this work, a highly efficient structural reliability analysis method coupling active Kriging algorithm...
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Measurements and calculations of the width of the fracture process zones on the surface of notched concrete beams
PublicationArtykuł omawia wyniki pomiaru i analizy numerycznej szerokości strefy pękania w belkach betonowych z nacięciem. Do pomiarów zastosowano metodę DIC. Do symulacji zastosowano model sprężysto - plastyczny i model z degradacją sztywności. Oba modele zostały rozszerzone o nielokalne osłabienie. Wyniki symulacji porównano z doświadczeniami.
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PROPRIETARY SOFTWARE IN TECHNICAL HIGHER EDUCATION
PublicationThe authors present a relatively easy way to extend the quality of education in professional studies (engineering) on major “Geodesy and Cartography”. They indicate the possibility to deepen students’ knowledge by using in the educational process proprietary software enriching education. The authors use their own experiences, results of the cooperation with employers, as well as the effects of scientific research to introduce into...