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Wyniki wyszukiwania dla: WHOLE-GENOME SEQUENCING
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Endoscopic Videos Deinterlacing and On-Screen Text and Light Flashes Removal and Its Influence on Image Analysis Algorithms' Efficiency
PublikacjaIn this article, deinterlacing and removing on- screen text and light flashes methods on endoscopic video images are discussed. The research is intended to improve disease recognition algorithms' performance. In the article, four configurations of deinterlacing methods and another four configurations of text and flashes removal methods are described and examined. The efficiency of endoscopic video analysis algorithms is measured...
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Detection of the Oocyte Orientation for the ICSI Method Automation
PublikacjaAutomation or even computer assistance of the popular infertility treatment method: ICSI (Intracytoplasmic Sperm Injection) would speed up the whole process and improve the control of the results. This paper introduces a preliminary research for automatic spermatozoon injection into the oocyte cytoplasm. Here, the method for detection a correct orientation of the polar body of the oocyte is presented. Proposed method uses deep...
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Analytical approach for membrane action in laterally-restrained reinforced concrete square slabs under uniformly distributed loads
PublikacjaLaterally-restrained reinforced concrete slabs can mobilise compressive membrane action and subsequent tensile membrane action under extreme loading conditions, thereby enhancing the load resistance under uniformly distributed loads. Previous analytical study focuses primarily on tensile membrane action in simply-supported slabs. This paper describes an analytical approach for membrane action in laterally-restrained square slabs....
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Evaluation of aspiration problems in L2 English pronunciation employing machine learning
PublikacjaThe approach proposed in this study includes methods specifically dedicated to the detection of allophonic variation in English. This study aims to find an efficient method for automatic evaluation of aspiration in the case of Polish second-language (L2) English speakers’ pronunciation when whole words are analyzed instead of particular allophones extracted from words. Sample words including aspirated and unaspirated allophones...
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Sperm segmentation and abnormalities detection during the ICSI procedure using machine learning algorithms
Publikacja(1) About 15-20% of couples struggle with the problem of infertility. 30 to 40% of these cases are caused by abnormalities in the structure and motility of sperm. Sometimes the only possibility for such people is to use the procedure of artificial insemination. CASA systems are used to increase the efficiency of this procedure by selecting the appropriate sperm cell. (2) This paper presents an approach to the sperm classification...
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The evidence for the impact of policy on physical activity outcomes within the school setting: A systematic review
PublikacjaPurpose Despite the well-established health benefits of physical activity (PA) for young people (aged 4–19 years), most do not meet PA guidelines. Policies that support PA in schools may be promising, but their impact on PA behavior is poorly understood. The aim of this systematic review is to ascertain the level and type of evidence reported in the international scientific literature for policies within the school setting that...
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An examination of an Antarctic soil metagenomic-derivate putative methylthioadenosine phosphorylase gene as a novel reporter gene for promoter trapping
PublikacjaThe rsfp gene was discovered during examination ofan Antarctic soil-derived metagenome library and encodesa bacterial methylthioadenosine phosphorylase (GenBank accession number GQ202582). In a previous study, we found that E. coli colonies expressing the rsfp gene reveal strong pink fluorescence after exposure to UV light when grown on culture medium supplemented with rhodamine B (Cieśliński et al., 2009). In contrast to that,...
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Molecular Strategy for Survival at a Critical High Temperature in Eschierichia coli
PublikacjaThe molecular mechanism supporting survival at a critical high temperature (CHT) in Escherichia coli was investigated. Genome-wide screening with a single-gene knockout library provided a list of genes indispensable for growth at 47°C, called thermotolerant genes. Genes for which expression was affected by exposure to CHT were identified by DNA chip analysis. Unexpectedly, the former contents did not overlap with the latter except...
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Perspektywy wykorzystania olfaktometrii i elektronicznego nosa w badaniach stanu środowiska
PublikacjaIn environmental state investigations the two approaches are dominate: field olfactometry and instrumental methods. In contradiction to classical chromatographic methods, both field olfactometry and electronic nose (e-nose) in based on the analysis of the aroma as a whole, without separating gaseous mixture (air) to individual aromatic compounds. With respect to simplicity of use and relatively short time of analysis, both systems...
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Effect of electrode resistance on admittance spectra of planar organic device carrying SCLC and on charge carrier mobility extracted from susceptance
PublikacjaThe work presents small signal admittance spectra of a sandwich system with thin organic layer carrying a space charge limited current. The effect of series resistance of electrodes on the spectra is discussed. Spectra of small signal capacitance are added to get more detailed insight. The analysis performed shows that the series resistance can affect both parts of small signal response within a whole range of frequency. Moreover,...
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DYNAMIC RESPONSE OF FORUM GDANSK STRUCTURE DUE TO RAIL TRAFFIC
PublikacjaThe paper presents the study of the impact of vibration induced by the movement of the railway rolling stock on the Forum Gdańsk structure. This object is currently under construction and is located over the railway tracks in the vicinity of the Gdańsk Główny and Gdańsk Śródmieście railway stations. The analysis covers the influence of vibrations on the structure itself and on the people within. The in situ measurements on existing...
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On well-posedness of the first boundary-value problem within linear isotropic Toupin–Mindlin strain gradient elasticity and constraints for elastic moduli
PublikacjaWithin the linear Toupin–Mindlin strain gradient elasticity we discuss the well-posedness of the first boundary-value problem, that is, a boundary-value problem with Dirichlet-type boundary conditions on the whole boundary. For an isotropic material we formulate the necessary and sufficient conditions which guarantee existence and uniqueness of a weak solution. These conditions include strong ellipticity written in terms of higher-order...
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Rearrangements of the nitrifiers population in an activated sludge system under decreasing solids retention times
PublikacjaDue to the key role of nitrite in novel nitrogen removal systems, nitrite oxidizing bacteria (NOB) have been receiving increasing attention. In this study, the coexistence and interactions of nitrifying bacteria were explored at decreasing solids retention times (SRTs). Four 5-week washout experiments were carried out in laboratory-scale (V=10 L) sequencing batch reactors (SBRs) with mixed liquor from two full-scale activated sludge...
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Implementation of failover and load balancing algorithms in SIP PBX High Availability system
PublikacjaGoal of the project was to design a High Availability SIP VoIP system that guarantees access to additional services like auto-attendent and automatic call distribution. The realization of the project required system to have load balancing and failover algorithms implemented. From the end users’ point of view the whole system had to figure as a single element. After taking under consideration the known methods of implementations...
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Testing the Diagnostic Utility of Recombinant Toxoplasma Gondii Chimeric Antigens – Generated Datasets
PublikacjaThe datasets titled Toxoplasma gondii recombinant chimeric antigens – IgM and IgG ELISAs – mouse serum samples and Toxoplasma gondii recombinant chimeric antigens – IgG and IgM ELISAs – human serum samples contain absorbance measurements obtained during serological tests using mouse and human sera in enzyme-linked immunosorbent assay (ELISA) tests based on recombinant chimeric antigens. The datasets allows a comparison of absorbance...
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Silica-templated three-dimensional graphene xerogels
PublikacjaMost porous carbons require the uniform pore size distribution therefore many approaches have been applied to template the carbon scaffolds and among them the use of silica particles is the easiest and the most effective. After discovering of graphene, the whole family of new carbon nanomaterials arose and one of the promising materials is graphene xerogel (GX) with a three-dimensional, highly porous structure. This monograph reviews...
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The initial selection of parameters for dynamic brake for car engine test dynamometer
PublikacjaThe article presents an analysis of the car engine loads. The aim of the analysis was to determine the parameters of the brake / electric motor on an engine test bad. Analysis of loads on the driving tests concerned on chassis dynamo to simulate them on an engine dynamometer. To check the range of dynamometer shaft angular acceleration inertial mass of a car was reduced on the crankshaft axis. The calculations of maximum shaft...
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Elliptical slot UWB monopole antenna
PublikacjaThe UWB monopole antenna with elliptical radiating slot end and microstrip feeding line terminated with radial stub have been designed, fabricated and measured. The antenna show return loss less than -12 dB in the whole UWB bandwidth. Linearity of the reflection coefficient phase product have also been achieved. Radiation patterns of the antenna measured at three selected frequency points indicated regular, approximately omni directional...
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A cryptic ribosome binding site, false signals in reporter systems and avoidance of protein translation chaos
PublikacjaThe expression of reporter gene may be induced by activation of cryptic signalling sequences, as we found while constructing the mutS-lacZ fusion gene. We cloned the Escherichia coli lacZ gene encoding beta-galactosidase into a plasmid vector carrying the Thermus thermophilus mutS gene. The clones expected to produce beta-galactosidase as the C-terminal fusion were selected for the complementation of beta-galactosidase activity...
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A distillery by-product as an external carbon source for enhancing denitrification in mainstream and sidestream treatment processes
PublikacjaThe use of fusel oil as an 'alternative' carbon source for denitrification in the mainstream and sidestream treatment processes was studied. Research comprised two kinds of batch experiments as well as acclimation of process biomass to external carbon sources. In the conventional nitrate utilization rate (NUR) measurements (one-phase experiments with non-acclimated biomass), the NUR with fusel oil was 1.4-1.7 g N/(kg VSS•h which...
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Decentralized control of a different rated parallel UPS systems
PublikacjaThe paper presents the single phase uninterruptible power supply (UPS) system with galvanic separated DC-AC-DC-AC converters operating in parallel. The CAN physical layer based system of communication between converters has been developed and applied, which allow to utilize a decentralized master-slave control providing high availability factor of the whole UPS system. The control system of particular converters has been developed...
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Diagnostics of high-voltage varistor quality using resonant ultrasound spectroscopy
PublikacjaResonant spectroscopy is an effective nondestructive testing method focused on defects detection in tested objects. Resonance spectrum contains an information about the mechanical properties and particularly about the structural homogeneity of the whole object. A swept frequency method has been used to measure the selected resonant frequencies range. The system for measurement of resonant ultrasound spectroscopy of high-voltage...
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Limiting Partial Molar Volumes of Tetra-n-Alkylammonium Perchlorates in N,N-dimethylacetamide, Triethylphosphate and Dimethyl Sulfoxide at 298.15 K
PublikacjaThe densities of tetraalkylammonium perchlorates R4NClO4(R = methyl, or ethyl, or propyl, or butyl) and ammonium perchlorate solutions in N, N - dimethylacetamide, dimethyl sulfoxide, and triethylphosphate have been measured over the whole composition range atT = 298.15 K. From these densities, apparent and limiting partial molar volumes of the electrolytes and ions...
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Validation of dynamic electrochemical impedance spectrograms using autocorrelation function
PublikacjaValidation of impedance data is essential for checking the reliability of experimental data. Kramers – Kronig transformation is used to verify data obtained from classical Electrochemical Impedance Spectroscopy (EIS) measurements. Data obtained from Dynamic Electrochemical Impedance Spectroscopy (DEIS) could be validated in the same way, but in this case, there is no information about internal consistency between every single spectrum...
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Displacement control in PWK-type pumps
PublikacjaThe most important, strategic goal however is creation of the variable displacement version of the new pump PWK. Thanks to full discharge of it's commutation mechanism from hydrostatic forces the variable pump can be directly controlled by low-energy actuator like proportional electromagnet or stepping motor. It means that costly and complicated hydraulic servomechanism (applied in all present variable displacement pumps) is no...
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Accuracy and Availability of EGNOS - Results of Observations
PublikacjaAccording to SBAS concept the user should receive timely the correct information about the system integrity and corrections to the pseudoranges measurements, which leads to better accuracyof coordinates. In theory the whole system is permanently monitored by RIMS stations, so it is impossible to deliver the faulty information to the user. The quality of the system is guaranteed inside the border of the system coverage however in...
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AI in the creation of the satellite maps
PublikacjaSatellite and aerial imagery acquisition is a very useful source of information for remote monitoring of the Earth’s surface. Modern satellite and aerial systems provide data about the details of the site topography, its characteristics due to different criteria (type of terrain, vegetation cover, soil type and moisture content), or even information about emergency situations or disasters. The paper proposes and discusses the process...
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Parametric analysis of Istanbul's Ring Road viaduct for three levels of seismic load
PublikacjaThe paper presents a numerical analysis of the Istanbul's ring road viaduct that is currently under construction within the Northern Marmara Highway project. The structure, due to its location on seismic prone areas is exposed to seismic loads of different magnitude and different return periods. The study is fo-cused on concrete bridge supports that are design to work in nonlinear range. The study, conducted in SOFISTIK environment,...
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CSR in Polish SMEs: From Perception to Love: Examples of Socially Engaged Firms from Pomeranian Region
PublikacjaNotwithstanding the worldwide increasing awareness of the importance of social issues in nowadays business management, Polish small and medium enterprises seem to remain in the group of followers, certainly not leaders of corporate social responsibility (CSR) movement, and this despite an important dissemination efforts by numerous institutions. The aim of this paper is to present the bumpy road to the implementation, still incomplete,...
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Environmentally friendly polymer-rubber composites obtained from waste tyres: A review
PublikacjaThe paper is transdisciplinary. The complex overview on changes in policy and approach to waste tyres that leads to both solving environmental problem of post consumer tyres and creating environmentally friendlier novel materials are presented. It is shown that in the world, the amount of polymer wastes increases every year. Most of them are in the form of post-consumer tyres. Recycling and recovery of such tyres is a serious environmental...
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Multiple output second-generation current conveyor utilizing high frequency output stage
PublikacjaIn this paper a multiple output second-generation current conveyor (MOCCII) is presented. The main advantage of the proposed general circuit architecture over a typical structure, well known in the literature, is the use of a high passband multiple output current mplifier block instead of cascaded current mirrors. It gives similar frequency responses for all the outputs of the current conveyor and also maintains simplicity of the...
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Hybrid Method Analysis of Unshielded Guiding Structures
PublikacjaA combination of mode matching, finite element methods and generalized impedance matrix is presented in a context of propagation problems for open guiding structures. The computational domain is divided into two regions: the first one is a circular cylinder containing whole guiding structure and the second one surrounds this artificial cylinder. The impedance matrix is calculated with the use of finite element method in the first...
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Phenotypic consequences of the LYS4 gene disruption in Candida albicans
PublikacjaThe main scientific purpose of our studies was to verify the hypothesis that homoaconitase (HA) from Candida albicans, an enzyme catalyzing a second step of the α-aminoadipate pathway (AAP) of L-Lys biosynthesis may become a new target for antifungal chemotherapy. Previous studies indicated that the A. fumigatus mutant lacking the functional lysF gene, encoding HA, exhibited attenuated virulence in a low-dose mouse infection model...
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Comparative analysis of mRNA transcripts of HT-29 cell line expressed in identical quantities for pathogenic E. coli strains UM146 and UM147 with control Escherichia coli Nissle 1917
PublikacjaAim of study was comparative analysis of mRNA transcripts of HT-29 cell line, expressed in identical quantities for the combination of pathogenic and non-pathogenic Escherichia coli strains. HT-29 confluent monolayers infection with two pathogenic E. coli strains UM146 and UM147 resulted in two sets of mRNA transcripts that were identical with RNA transcripts obtained for non-pathogenic one strain E. coli Nissle 1917. In this study...
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Molecular Dynamics to Predict Cryo-EM: Capturing Transitions and Short-Lived Conformational States of Biomolecules
PublikacjaSingle-particle cryogenic electron microscopy (cryo-EM) has revolutionized the field of the structural biology, providing an access to the atomic resolution structures of large biomolecular complexes in their near-native environment. Today’s cryo-EM maps can frequently reach the atomic-level resolution, while often containing a range of resolutions, with conformationally variable regions obtained at 6 Å or worse. Low resolution...
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Bortezomib induces methylation changes in neuroblastoma cells that appear to play a significant role in resistance development to this compound
PublikacjaThe anticancer activity of bortezomib (BTZ) has been increasingly studied in a number of indications and promising results for the use of this treatment have been shown in neuroblastoma. As BTZ treatment is usually administered in cycles, the development of resistance and side effects in patients undergoing therapy with BTZ remains a major challenge for the clinical usage of this compound. Common resistance development also means...
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Ocena wzmocnienia podłoża metodą wymiany dynamicznej na podstawie próbnych obciążeń kolumn
PublikacjaAnaliza wykonanego wzmocnienia słabego podłoża gruntowego pod nasyp drogowy w technologii kolumn DR na przykładzie obwodnicy Brodnicy. Omówienie warunków geotechnicznych podłoża i zastosowanych rozwiązań. Analiza wsteczna na podstawie wyników próbnych obciążeń kolumn oraz pomiarów osiadań wzmocnionego podłoża całego obszaru. Porównanie uzyskanych wyników i wnioski.
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The first study on the usefulness of recombinant tetravalent chimeric proteins containing fragments of SAG2, GRA1, ROP1 and AMA1 antigens in the detection of specific anti-Toxoplasma gondii antibodies in mouse and human sera
PublikacjaThis study presents an evaluation of four tetravalent recombinant chimeric proteins containing fragments of the Toxoplasma gondii antigens, SAG2, GRA1, ROP1 and AMA1, as potential replacements of a the soluble, whole-cell tachyzoite lysate (TLA) used in serological assays. Recombinant chimeric proteins (SAG2-GRA1-ROP1-AMA1N, AMA1N-SAG2-GRA1-ROP1, AMA1C-SAG2-GRA1-ROP1, and AMA1-SAG2-GRA1-ROP1) obtained by genetic engineering were...
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Determination of Vehicles Load Equivalency Factors for Polish Catalogue of Typical Flexible and Semi-rigid Pavement Structures
PublikacjaThe new Polish Catalog of Typical Flexible and Semi-rigid Pavement Structures was introduced to use in practice in 2014. Much of works were focused on actualization of vehicles load equivalency factors. For this purpose data delivered from weigh-inmotion were analyzed. Four methods of determination of load equivalency factors for pavement structure design were compared. The analysis showed that fourth power equation, AASHTO 1993...
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Interactive and Media Architecture – From Social Encounters to City Planning Strategies
PublikacjaThe paper searches into the potential of media and interactive projects to support participation and generate social encounters in public spaces. Moreover, it proposes implementation of media and interactive projects into city planning processes. On the basis of theoretical approaches, case studies and interdisciplinary surveys the paper gives insight how interactive and media architecture can engage people in activities in urban...
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Analysis of energy efficiency of suburban railway transport network
PublikacjaRising numbers of agglomeration residents cause increased need for people movement on daily basis. Because of congestion of local roads, air pollution and limited parking space, providing mass transit based on electric traction is reasonable. While the electric rail vehicles are considered highly efficient in themselves, they need to be analyzed as a part of a transport network, because energy consumption depends on operating conditions...
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Дослідження проблем зайнятості випускників навчальних закладів
PublikacjaУ зв'язку зі зниженням загального рівня зайнятості та з огляду на кризові явища в українській економіці актуальною залишається проблема працевлаштування молоді. Спільність проблеми зайнятості випускників вишів як в Україні, так і в Європі дала змогу провести міжнародне дослідження, щоб виявити основні причини її виникнення. Результати досліджень підтвердили гіпотезу авторів. В її основі лежить комплекс причин, що пов’язані як зі...
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ROZPROSZONY SYSTEM KOMUNIKACJI I NADZORU DLA MORSKIEGO ODDZIAŁU STRAŻY GRANICZNEJ – PROJEKT STRADAR
PublikacjaSystem STRADAR to wynik realizacji projektu, którego gestorem jest MO SG. Był on współfinansowany przez NCBiR. W artykule opisano system, przedstawiając ogólną koncepcję, architekturę, elementy funkcjonalne i realizację oprogramowania zainstalowanego w tych elementach. Krótko scharakteryzowano także testy, jakim poddano system, który na tym etapie – jako całość – osiągnął VII poziom gotowości technologii.
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Balancing agility and discipline in a research project
PublikacjaSuccessful software development requires both agility and discipline. Optimal selection of methods, however, is not an easy task. The problem becomes even more difficult for long lasting projects. Appropriate selection of methods involving skillful introduction and abandonment of certain practices in time makes the whole process dynamic. The paper presents in this context a research project which was realized in a few iterations....
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The propagation of the waves in the CTO S.A. towing tank
PublikacjaThe paper presents the results of research focused on the wave propagation in the CTO S.A. deepwater towing tank. In the scope of paper, the wavemaker transfer function was determined for regular waves, based on the Biésel Transfer Function and further for irregular waves, based on Hasselman model of nonlinear energy transfer. The phenomena: wave damping, wave breakdown and wave reflection, were measured, analyzed and mathematically...
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Review on the quality of sediments from the stormwater drainage system in the urban area
PublikacjaThe main task of the stormwater drainage system is a safe drainage of rainwater and snowmelt from the urban area to the receiver. The flow of rain water in the drainage pipes is directly related with the formation of sediments in the whole stormwater system. In addition, pollutants from land runoff get adsorbed to the sediments. The sludge is mainly formed in those elements of stormwater drainage system, wherein the flow conditions...
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Quantum-state transfer in spin chains via isolated resonance of terminal spins
PublikacjaWe propose a quantum-state transfer protocol in a spin chain that requires only the control of the spins at the ends of the quantum wire. The protocol is to a large extent insensitive to inhomogeneity caused by local magnetic fields and perturbation of exchange couplings. Moreover, apart from the free evolution regime, it allows one to induce an adiabatic spin transfer, which provides the possibility of performing the transfer...
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Does source matter? Generation of investment expenditures by different types of local government revenues
PublikacjaThe purpose of the article was to investigate the impact of the three fundamental statutory categories of budget revenues, i.e. own revenues, general subsidies and specific grants on the size of investments made by local government units in Poland. The subject scope included the local government subsector in its entirety, as well as divided into 4 groups: communes (gminas), cities with powiat rights, districts (powiats) and province...
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Relationship between semi- and fully-device-independent protocols
PublikacjaWe study the relation between semi and fully device independent protocols. As a tool, we use the correspondence between Bell inequalities and dimension witnesses. We present a method for converting the former into the latter and vice versa. This relation provides us with interesting results for both scenarios. First, we find new random number generation protocols with higher bit rates for both the semi and fully device independent...
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Dipole-driven dynamics for near-threshold electron/positron interactions with pyrimidinic DNA bases: a path to compound formations
PublikacjaCalculations are reported for electron and positron scattering from isolated cytosine and thymine, where the two pyrimidinic single-ring DNA bases, in the gas-phase at energies near the elastic threshold, they reveal the special features of the dipole-driven scattering states. All molecules examined exhibit, in fact, supercritical (>1.67 D) permanent dipoles which can therefore also support, below threshold, excited bound compound...