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Search results for: peptide profile
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Parallel processing of multimedia streams
PublicationRozdział przedstawia platformę KASKADA służącą do przetwarzania strumieni multimedialnych. Został opisany jej projekt: diagramy UML klas i sekwencji obrazujące mechanizmy przetwarzania strumieni, oraz szczegóły komunikacji. Zaprezentowano, również, specjalistyczny framework wspomagający tworzenie i wykonywanie algorytmów, jak również definiowanie scenariuszy usług, wraz z oceną ich użyteczności.
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Przetwarzanie strumieni multimedialnych na klastrze komputerowym Galera
PublicationSformułowano problemy przetwarzania strumieni multimedialnych w czasie rzeczywistym. Rozpatrzono różne możliwości realizacji tego typu przetwarzania i na tej podstawie opracowano wymagania na platformę KASKADA ułatwiające wykonanie tego typu zadań na klastrze komputerowym o wysokiej wydajności przetwarzania. Podano architekturę takiej platformy oraz sposób jej implementacji. Dokonano oceny przydatności tej platformy przetwarzania...
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Category-Based Workload Modeling for Hardware Load Prediction in Heterogeneous IaaS Cloud
PublicationThe paper presents a method of hardware load prediction using workload models based on application categories and high-level characteristics. Application of the method to the problem of optimization of virtual machine scheduling in a heterogeneous Infrastructure as a Service (IaaS) computing cloud is described.
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Prediction of Processor Utilization for Real-Time Multimedia Stream Processing Tasks
PublicationUtilization of MPUs in a computing cluster node for multimedia stream processing is considered. Non-linear increase of processor utilization is described and a related class of algorithms for multimedia real-time processing tasks is defined. For such conditions, experiments measuring the processor utilization and output data loss were proposed and their results presented. A new formula for prediction of utilization was proposed...
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Mobile Offloading Framework: Solution for Optimizing Mobile Applications Using Cloud Computing
PublicationNumber of mobile devices and applications is growing rapidly in recent years. Capabilities and performance of these devices can be tremendously extended with the integration of cloud computing. However, multiple challenges regarding implementation of these type of mobile applications are known, like differences in architecture, optimization and operating system support. This paper summarizes issues with mobile cloud computing and...
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Evaluation of Multimedia Stream Processing Modeling Language from the Perspective of Cognitive Dimensions
PublicationW referacie zawarto opis zastosowania wymiarów poznawczych do oceny języka modelowania przetwarzania strumieni multimedialnych, nazwanego MSP-ML, w trakcie tworzenia tego języka. Poszczególne części referatu prezentują kontekst i motywacje oceny MSP-ML, metodę oceny, rezultaty oceny oraz porównanie rezultatów oceny z wynikami otrzymanymi za pomocą innych metod oceny języków modelowania wizualnego.
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A Model-Driven Solution for Development of Multimedia Stream Processing Applications
PublicationThis paper presents results of action research related to model-driven solutions in the area of multimedia stream processing. The practical problem to be solved was the need to support application developers who make their multimedia stream processing applications in a supercomputer environment. The solution consists of a domain-specific visual language for composing complex services from simple services called Multimedia Stream...
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Modele przetwarzania aplikacji na klastrach obliczeniowych
PublicationW dzisiejszych czasach badania prowadzone w różnych dziedzinach nauki a także różnego rodzaju aplikacje i wdrożone systemy operują na coraz większych wolumenach danych przy jednocześnie rosnących wymaganiach dotyczących czasu wykonania. Z tego powodu coraz częściej do obliczeń wykorzystuje się klastry obliczeniowe, gdzie do dyspozycji użytkowników pozostaje ogromna moc obliczeniowa (liczona w tera a nawet peta flopach), terabajty...
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Influence of YARN Schedulers on Power Consumption and Processing Time for Various Big Data Benchmarks
PublicationClimate change caused by human activities can influence the lives of everybody onthe planet. The environmental concerns must be taken into consideration by all fields of studyincludingICT. Green Computing aims to reduce negative effects of IT on the environment while,at the same time, maintaining all of the possible benefits it provides. Several Big Data platformslike Apache Spark orYARNhave become widely used in analytics and...
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Analyzing energy/performance trade-offs with power capping for parallel applications on modern multi and many core processors
PublicationIn the paper we present extensive results from analyzing energy/performance trade-offs with power capping observed on four different modern CPUs, for three different parallel applications such as 2D heat distribution, numerical integration and Fast Fourier Transform. The CPU tested represent both multi-core type CPUs such as Intel⃝R Xeon⃝R E5, desktop and mobile i7 as well as many-core Intel⃝R Xeon PhiTM x200 but also server, desktop...
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Survey of Methodologies, Approaches, and Challenges in Parallel Programming Using High-Performance Computing Systems
PublicationThis paper provides a review of contemporary methodologies and APIs for parallel programming, with representative technologies selected in terms of target system type (shared memory, distributed, and hybrid), communication patterns (one-sided and two-sided), and programming abstraction level. We analyze representatives in terms of many aspects including programming model, languages, supported platforms, license, optimization goals,...
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A Parallel Genetic Algorithm for Creating Virtual Portraits of Historical Figures
PublicationIn this paper we present a genetic algorithm (GA) for creating hypothetical virtual portraits of historical figures and other individuals whose facial appearance is unknown. Our algorithm uses existing portraits of random people from specific historical period and social background to evolve a set of face images potentially resembling the person whose image is to be found. We then use portraits of the person's relatives to judge...
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Modelling Coarse Particulate Matter PM10 Concentration in the Tricity Area Using GIS
PublicationEnvironmental pollution is an issue of global concern, with Particulate Matter (PM) poisoning being a prime cause of lung cancer. This has led the European Commission to establish strict daily and annual PM concentration limits. The monitoring of air quality in major cities is the responsibility of European Member States. The Tricity, a 414.81 km 2 area in northern Poland, is monitored by a network of only 9 stations operated by...
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Network society: a concept of smart information management
PublicationAutomatic enhancement of Internet broadcasted news has been recently gaining increasing importance and interest. Existing applications and models of textual Event Detection in online media are based on the analysis of news distributed via RSS (Rich Site Summary called also Really Simple Syndication) channels or available at news websites. It assumes that each piece of news is equally available to the reader and, therefore, describes...
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Efektywność energetyczna pojazdu szynowego w różnych warunkach obciążenia
PublicationW artykule zaprezentowano wyniki analizy dotyczącej wpływu obciążenia na efektywność energetyczną miejskiego pojazdu szynowego. Obciążenie zależy od liczby pasażerów i od profilu prędkości – wyższa masa, prędkość i przyspieszenie wymagają większej siły pociągowej, a w konsekwencji wzrostu momentu obrotowego na wale silnika. Ponieważ liczba pasażerów zależy od pory dnia, a prędkość zależy od sytuacji online, uwzględniono odpowiednie...
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Impact of climate change on groundwater recharge in shallow young glacial aquifers in northern Poland
PublicationWe investigated the influence of climate change in the period 1951–2020 on shallow aquifers in the Brda and Wda outwash plains (Pomeranian Region, Northern Poland). There was a significant temperature rise (0.3 °C/10 years), which accelerated after 1980 (0.66 °C/10 years). Precipitation became increasingly irregular – extremely rainy years occurred right after or before extremely dry years, and intensive rainfall events became...
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Low-power microwave-induced fabrication of functionalised few-layer black phosphorus electrodes: A novel route towards Haemophilus Influenzae pathogen biosensing devices
PublicationIn this paper, various passivation schemes were applied at few-layer black phosphorus (FLBP) to achieve covalent functionalisation with 4-azidobenzoic acid, improving its electrochemical response intended for analytical and biosensing applications. The thermal and microwave assisted modification procedures in toluene and dime-thylformamide resulted in high reversibility of reactions on functionalised FLBP using a ferricyanide/ferrocya-nide...
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An Ontology-based Contextual Pre-filtering Technique for Recommender Systems
PublicationContext-aware Recommender Systems aim to provide users with the most adequate recommendations for their current situation. However, an exact context obtained from a user could be too specific and may not have enough data for accurate rating prediction. This is known as the data sparsity problem. Moreover, often user preference representation depends on the domain or the specific recommendation approach used. Therefore, a big effort...
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REVISING ENTREPRENEURIAL ORIENTATION (EO) IN SOCIAL ENTREPRENEURSHIP, QUALITATIVE EVIDENCE FROM WORK INTEGRATION SOCIAL ENTERPRISES (WISES) FROM POLAND
PublicationEntrepreneurial behaviour and entrepreneurial orientation (EO) of (commercial) entrepreneurship. have received significant scholarly attention in entrepreneurship and management research However, there are insufficient attempts discussing such behaviour and EO in non-profit, and particularly social entrepreneurship context, arguing that EO is higher in such contexts, or remains the same, some new EO dimensions are proposed, existing...
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Inverse heat transfer problem solution of sounding rocket using moving window optimization
PublicationAn Inverse Heat Transfer Problem is solved for a sounding rocket module given its geometry and measured temperature profile. The solution is obtained via moving window optimization, a technique for solving inverse dynamics. An analysis is performed to modify the method to avoid oscillatory behavior of the resulting heat flux profile. The method parameters are tuned in relation to characteristic phases of the flight. Results are...
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Opracowanie deskryptora nawierzchni drogowej do oceny oporu toczenia opon samochodowych
PublicationNa początku niniejszej pracy pt. „Opracowanie deskryptora nawierzchni drogowej do oceny oporu toczenia opon samochodowych” przedstawiono zagadnienia dotyczące oporów ruchu pojazdu. Omówiono metody zarówno drogowe, jak i laboratoryjne badań oporu toczenia opon samochodowych. Zaprezentowano przykładowe wartości współczynników oporu toczenia opon na różnych rodzajach nawierzchni. Kolejno omówiono metody pomiaru tekstury nawierzchni....
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KASKADA - środowisko do wytwarzania i uruchamiania multimedialnych aplikacji równoległych
PublicationOpisano podstawowe cechy platformy KASKADA jako środowiska do tworzenia i uruchamiania multimedialnych aplikacji rozproszonych. Przedstawiono funkcjonalność wspierającą konstrukcję algorytmów, zaimplementowanych jako zadania obliczeniowe wykonujące analizę danych wejściowych, usług prostych umożliwiających uruchamianie zadań obliczeniowych oraz usług złożonych agregujących usługi proste za pomocą scenariuszy wykonania. Zaprezentowano...
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Generation and Propagation of Nonlinear Waves in a Towing Tank
PublicationThe paper presents the results of the research focused on linear and nonlinear wave generation and propagation in a deepwater towing tank equipped with a single flap-type wavemaker of variable draft. The problem of wave generation and propagation has been theoretically formulated and solved by applying an analytical method; linear and nonlinear solutions were obtained. The linear solution has been verified experimentally. The...
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Real-time monitoring of the emission of volatile organic compounds from polylactide 3D printing filaments
PublicationEstablishing the emission profile of volatile organic compounds generated during fused deposition modeling 3D printing using polymer filaments is important in terms of both understanding the processes taking place during thermal degradation of thermoplastics, and assessing the user's exposure to potentially harmful volatiles. However, obtaining detailed, real-time qualitative and quantitative results poses a challenge. In this...
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Estimation of Conservative Contaminant Travel Time through Vadose Zone Based on Transient and Steady Flow Approaches
PublicationEstimation of contaminant travel time through the vadose zone is needed for assessing groundwater vulnerability to pollution, planning monitoring and remediation activities or predicting the effect of land use change or climate change on groundwater quality. The travel time can be obtained from numerical simulations of transient flow and transport in the unsaturated soil profile, which typically require a large amount of data and...
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A five-year retrospective study shows increasing rates of antimicrobial drug resistance in Cabo Verde for both Staphylococcus aureus and Escherichia coli
PublicationObjectives Data on baseline drug resistance is important in informing future antimicrobial stewardship programs. So far, no data on the antimicrobial drug resistance of clinical isolates was available for the African archipelago of Cabo Verde. Methods We have performed a retrospective analysis over five-years (2013-17) of the antimicrombial drug susceptibility profiles of clinical isolates in the two main hospitals of Cabo Verde....
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Quest for the Molecular Basis of Improved Selective Toxicity of All-Trans Isomers of Aromatic Heptaene Macrolide Antifungal Antibiotics
PublicationThree aromatic heptaene macrolide antifungal antibiotics, Candicidin D, Partricin A (Gedamycin) and Partricin B (Vacidin) were subjected to controlled cis-trans to all trans photochemical isomerization. The obtained all-trans isomers demonstrated substantially improved in vitro selective toxicity in the Candida albicans cells: human erythrocytes model. This effect was mainly due to the diminished hemotoxicity. The molecular modeling...
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Jacek Krenz : City in my eyes
PublicationSketch City: Tips and Inspiration for Drawing on Location is the companion for any creative traveler, urban explorer, or budding artist. 50 artists scattered around the globe have been brought together to share tips about their favorite urban settings, including locations in South America, Europe, Canada, Asia, and beyond. Citified sketchers are guiding through techniques for capturing frenetic street scenes as well as the rare...
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Decomposition of Acoustic and Entropy Modes in a Non-Isothermal Gas Affected by a Mass Force
PublicationDiagnostics and decomposition of atmospheric disturbances in a planar flow are considered in this work. The study examines a situation in which the stationary equilibrium temperature of a gas may depend on the vertical coordinate due to external forces. The relations connecting perturbations are analytically established. These perturbations specify acoustic and entropy modes in an arbitrary stratified gas affected by a constant...
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Influence of external walls' thermal capacitance on indoor thermal comfort
PublicationThe doctoral thesis presents the results of numerical investigations on the influence of walls’ thermal capacitance on indoor thermal comfort. A proper set of thermal parameters of a building structure can considerably limit the heating / cooling demand, and passively increase the indoor thermal comfort. However the effect of building thermal capacitance on indoor conditions is complex and not always beneficial. Among a great number...
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Open Innovation Competence for a Future-Proof Workforce: A Comparative Study from Four European Universities
PublicationDigital transformation is a key driving force of open innovation to capture and transfer knowledge inside and outside of a company’s bounds. New challenges in organizing multiple knowledge flows imply the need for increased competences related to this paradigm of future employees. In this article, we organize and aggregate the competencies required for open innovation collaboration and develop a competence profile that organizes...
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Recent Developments in Data-Assisted Modeling of Flexible Proteins
PublicationMany proteins can fold into well-defined conformations. However, intrinsically-disordered proteins (IDPs) do not possess a defined structure. Moreover, folded multi-domain proteins often digress into alternative conformations. Collectively, the conformational dynamics enables these proteins to fulfill specific functions. Thus, most experimental observables are averaged over the conformations that constitute an ensemble. In this...
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Synthetic strategies in construction of organic low molecular-weight carrier-drug conjugates
PublicationInefficient transportation of polar metabolic inhibitors through cell membranes of eukaryotic and prokaryotic cells precludes their direct use as drug candidates in chemotherapy. One of the possible solutions to this problem is application of the ‘Trojan horse’ strategy, i.e. conjugation of an active substance with a molecular carrier of organic or inorganic nature, facilitating membrane penetration. In this work, the synthetic...
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THE USE OF ULTRAFAST GAS CHROMATOGRAPHY FOR CLASSIFICATION OF PLUM SPIRITS = SPOSÓB WYKORZYSTANIA ULTRASZYBKIEJ CHROMATOGRAFII GAZOWEJ DO KLASYFIKACJI OKOWIT ŚLIWKOWYCH
PublicationStan środowiska ma znaczny wpływ na jakość upraw. W konsekwencji występowanie zanieczyszczeń w powietrzu ma istotny wpływ na jakość żywności. W skutek złego stanu powietrza zewnętrznego i wewnętrznego zmieniają się m.in. walory sensoryczne i zdrowotne niektórych produktów spożywczych. Z tego powodu należy nieustannie monitorować stan środowiska za pomocą m.in. nowoczesnej aparatury analitycznej jakim jest elektroniczny nos. W...
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Approximate solution for Euler equations of stratified water via numerical solution of coupled KdV system
PublicationWe consider Euler equations with stratified background state that is valid for internal water waves. The solution of the initial-boundary problem for Boussinesq approximation in the waveguide mode is presented in terms of the stream function. The orthogonal eigenfunctions describe a vertical shape of the internal wave modes and satisfy a Sturm-Liouville problem. The horizontal profile is defined by a coupled KdV system which is...
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Surface irregularities as a complex signal of tool representation together with uneven displacement in respect to the workpiece
PublicationIn a dynamic machining process, distortion in surface irregularity is a very complex phenomenon. Surface irregularities form a periodic representation of the tool profile with various kinds of disturbance in a broad range of changes in the height and length of the profile. To discern these irregularity disturbances, interactions of the tool in the form of changes perpendicular and parallel relative to the workpiece were analyzed...
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System oceny efektywności użytkowania aparatów słuchowych
PublicationCelem rozprawy jest opracowanie metody oceny efektywności protezowania słuchu przy użyciu aparatów słuchowych, która pozwoli w łatwy sposób poddawać ocenie korzyść z użytkowania protez słuchowych w najbardziej typowych sytuacjach akustycznych. Przedstawiono genezę podjętych badań i na tej podstawie zaproponowano cele i tezy rozprawy doktorskiej. W pracy w pierwszej kolejności zawarto przegląd dotyczący rodzajów ubytku słuchu i...
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Wpływ nagniatania ślizgowego na udział nośny chropowatości powierzchni
PublicationW pracy przedstawiono studium optymalizacji wielokryterialnej parametrów związanych z udziałem materiałowym profilu chropowatości powierzchni w celu określenia najlepszej nośności powierzchni. Opisano metodykę wielokryterialnej oceny parametrów chropowatości. W studium zawarto przykładowe badania wpływu optymalizacji parametrów obróbkowych nagniatania ślizgowego na wybrane parametry udziału materiałowego, profilu chropowatości...
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Novel Functionalization of Boron-Doped Diamond by Microwave Pulsed-Plasma Polymerized Allylamine Film
PublicationWe report the novel modification of a hydrogen-terminated polycrystalline boron-doped electrode with a microwave pulsed-plasma polymerized allylamine. Boron-doped diamond (BDD) was coated with a very thin layer of adherent cross-linked, pinhole- and additive-free allylamine plasma polymer (PPAAm) resistant to hydrolysis and delamination and characterized by a high density of positively charged amino groups. The pulsed microwave...
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‘Acridines’ as New Horizons in Antifungal Treatment
PublicationFrequent fungal infections in immunocompromised patients and mortality due to invasive mycosis are important clinical problems. Opportunistic pathogenic Candida species remain one of the leading causes of systemic mycosis worldwide. The repertoire of antifungal chemotherapeutic agents is very limited. Although new antifungal drugs such as lanosterol 14α-demethylase and β-glucan synthase inhibitors have been introduced into clinical...
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Permeability of the small intestinal mucus for physiologically relevant studies: Impact of mucus location and ex vivo treatment
PublicationThe small intestinal mucus is a complex colloidal system that coats the intestinal mucosa. It allows passage on nutrients/pharmaceuticals from the gut lumen towards the epithelium, whilst preventing it from direct contact with luminal microorganisms. Mucus collected from intestinal tissue is often used in studies looking at inter-mucosal transport of food particulates, drug carriers, etc. However, detaching the highly hydrated...
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pH-Responsive Drug Delivery Nanoplatforms as Smart Carriers of Unsymmetrical Bisacridines for Targeted Cancer Therapy
PublicationSelective therapy and controlled drug release at an intracellular level remain key challenges for effective cancer treatment. Here, we employed folic acid (FA) as a self-navigating molecule in nanoconjugates containing quantum dots (QDs) and β-cyclodextrin (β-CD) for the delivery of antitumor unsymmetrical bisacridine compound (C-2028) to lung and prostate cancers as well as normal cells. The bisacridine derivative can form the...
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Antifungal activity of thionated analogues of nva-fmdp and lys-nva-fmdp
Publicationotrzymano dwa peptydy w których wiązanie amidowe łączące aminokwasy zamieniono na tioamidowe w wyniku kilkunastoetapowej syntezy chemicznej. do reakcji tionowania zastosowano odczynnik lawessona. otrzymane związki poddano badaniom aktywności z wykorzystaniem pięciu szczepów candida , w tym szczepów opornych na flukonazol. stwierdzono, ze obecniość wiązania tioamidowego znacznie obniża aktywność przeciwgrzybową testowanych związków...
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Niebiałkowe związki azotowe
PublicationNiebiałkowe związki azotowe powstają w żywności wskutek enzymatycznych prze-mian różnych substratów zawierających w swym składzie azot. Są wśród nichprzede wszystkim aminokwasy, peptydy, nukleotydy, tlenek trimetyloaminy orazaminy i ich pochodne. Wywierają one korzystny lub niepożądany wpływ na smak,zapach i barwę żywności, mogą służyć jako wskaźniki świeżości, lub mogą byćspożywane w nadmiernych ilościach, wywierać działanie...
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Zastosowanie bakteriocyn - peptydów o aktywności bakteriobójczej
PublicationBakteriocyny są to peptydy bakteriobójcze produkowane przez wiele rodzajów bakterii w celu eliminacji ze środowiska bakterii innych rodzajów lub konkurowania z nimi. Cechą charakterystyczną tych peptydów jest to, że są one syntetyzowane na rybosomach. Mogą być modyfikowane potranslacyjnie lub nie. W chwili obecnej bakteriocyny stosowane są w przemyśle spożywczym jako dodatek do produktów żywnościowych, jednak ich potencjał aplikacyjny...
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Citropin 1.1 Trifluoroacetate to Chloride Counter-Ion Exchange in HCl-Saturated Organic Solutions: An Alternative Approach
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Ageing-Time Dependent Changes of Angiotensin I-Converting Enzyme-Inhibiting Activity of Protein Hydrolysates Obtained from Dry-Cured Pork Loins Inoculated with Probiotic Lactic Acid Bacteria
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Towards Healthcare Cloud Computing
PublicationIn this paper we present construction of a software platform for supporting medical research teams, in the area of impedance cardiography, called IPMed. Using the platform, research tasks will be performed by the teams through computer-supported cooperative work. The platform enables secure medical data storing, access to the data for research group members, cooperative analysis of medical data and provide analysis supporting tools...
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Contribution of dynamic vehicle loads to pavement failure
PublicationPavement surfaces are not ideally even, which causes dynamic loads of vehicle axles. Distribution of dynamic loads of a given axle is similar to normal distribution and can be described by static load and dynamic load coefficient. The dynamic load coefficient depends on road profile, vehicle speed, properties of suspensions and static load of axle. While for a given road section road profile remains constant, vehicle speed and...
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Platforma KASKADA - proces wytwarzania oprogramowania
PublicationZostał przedstawiony proces wytworzenia Platformy KASKADA służącej do przetwarzania strumieni multimedialnych w rozproszonym środowisku superkom-putera. Przedstawiono wymagania dotyczące Platformy, a następnie opisano przyjętą metodykę wytwarzania. Opi-sano przebieg poszczególnych iteracji procesu. Przedsta-wiono proces wytwarzania usług, od implementacji algo-rytmu, przez wdrożenie na Platformę, aż po akceptację i udostępnienie...