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Search results for: PCR CONTAMINATION
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Characterization of a cryptic plasmid pSFKW33 from Shewanella sp. 33b
PublicationA cryptic plasmid pSFKW33 from psychrotrophic bacterium Shewanella sp. 33B, an isolate from the Gulf of Gdansk (the Baltic Sea), was sequenced and characterized. It is an 8021 bpcircular molecule with 38% GC content, which shows a distinctive nucleotide sequence without homology to other known plasmids. The nucleotide sequence analysis predicts eight open reading frames. The deduced amino acid sequence of ORF-1 shared significant...
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Novel staphylococci nucH taxonomical marker used in identification of human-associated Staphylococcus succinus subsp. casei
PublicationThe aim of our study was to assess the sequencing of unique nucH gene fragment based on performed bioinformatics analysis as a novel diagnostic method for the identification of difficult to identify staphylococcal human pathogenic strains. Initially, PCR-RFLP-rrn analysis specific to the spacers between 16SrDNA and 23SrDNA followed by HhaI restriction analysis was performed. Further, sequencing of nucH and 16S rDNA genes fragments...
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Detekcja obumierania bakterii osadu czynnego
PublicationAnaliza składników głównych (PCA) jest narzędziem służącym wyodrębnieniu podstawowych czynników w rozważanych procesach w oparciu o dostępne pomiary. Zastosowanie PCA w monitorowaniu procesów pozwala na analizę pod kątem diagnostyki nie tylko wielkości mierzonych lecz również wielkości niedostępnych pomiarowo (ograniczenia technologiczne, koszty). Zaleta ta jest szczególnie istotna w przypadku biologicznej oczyszczalni ścieków,...
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Challenges associated with development of AUV - unmanned autonomous underwater vehicles to be operated using the AI-based control systems
PublicationThe last decade has been devoted towards further development of the UUV unmanned underwater vehicles which may be of two types. There are the USV unmanned surface vehicles and UUV unmanned underwater vehicles. There is a growing interest to work out and implement the fully advanced AUV autonomous underwater vehicles. The main drivers towards development of such the vehicles are the technologies of autonomous systems, sensors and...
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Development of a new generation of unmanned surface and underwater vehicles using the advanced technologies and achievements towards the application of control systems by the artificial intelligence AI.
PublicationThe operation of offshore structures at sea requires implementation of the advanced systems of permanent monitoring of work of such the installations. Novel solutions concerning such the systems should be associated with application of unmanned maritime surface and underwater platforms. The unmanned maritime platforms are and will be based on application of the newest achievements of some important technologies. Between these technologies...
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Marine and Cosmic Inspirations for AI Algorithms
PublicationArtificial Intelligence (AI) is a scientific area that currently sees an enormous growth. Various new algorithms and methods are developed and many of them meets practical, successful applications. Authors of new algorithms draw different inspirations. Probably the most common one is the nature. For example, Artificial Neural Networks were inspired by the structure of human brain and nervous system while the classic Genetic Algorithm...
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Review of sewage sludge management: standards, regulations and analytical methods
PublicationThis article presents the most popular methods of sewage sludge management and associated unit operations and processes referring to them. The most popular methods are: Reclamation and adaptation of lands to specific needs; plant cultivation not intended for consumption or for production of food; usage in agriculture; usage in building; recovery of phosphorus, rare earth metals or fats and usage in industry; producing combustible...
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Interrelationship between total volatile organic compounds emissions, structure and properties of natural rubber/polycaprolactone bio-blends cross-linked with peroxides
PublicationNatural rubber/polycaprolactone (NR/PCL) bio-based blends with different organic peroxides were prepared using an internal batch mixer and subsequently cross-linked at 170°C. Two types of commonly used organic peroxides, dicumyl peroxide and di(tert-butylperoxyisopropyl)benzene peroxide, were applied as free-radical initiator. Cross-linking efficiency of NR/PCL blends were investigated using oscillating disc rheometer measurements,...
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Structure and performance properties of environmentally-friendly biocomposites based on poly(ɛ-caprolactone) modified with copper slag and shale drill cuttings wastes
PublicationThe potential application of two types of industrial wastes, drill cuttings (DC) and copper slag (CS), as silica-rich modifiers of poly(ɛ-caprolactone) (PCL) was investigated. Chemical structure and physical properties of DC and CS fillers were characterized using X-ray diffractometer, X-ray fluorescence spectroscopy, particle size and density measurements. PCL/DC and PCL/CS composites with a variable content of filler (5 to 50...
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A simple modification to improve the accuracy of methylation-sensitive restriction enzyme quantitative polymerase chain reaction
PublicationDNA digestion with endonucleases sensitive to CpG methylation such as HpaII followed by polymerase chain reaction (PCR) quantitation is commonly used in molecular studies as a simple and inexpensive solution for assessment of region-specific DNA methylation. We observed that the results of such analyses were highly overestimated if mock-digested samples were applied as the reference.We determined DNA methylation levels in several...
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Rozdział 6. Epidemiologia molekularna - nowe metody typowania diagnostycznego mikroorganizmów = Molecular epidemiology new methods for diagnostic typing of microorganismus
PublicationMolekularne metody diagnostyczne oparte o analizę kwasów nukleinowych dają nowe możliwości laboratoriom w szybkim wykrywaniu i różnicowaniu mikroorganizmów patogennych. W pracy przedstawiono panujące tendencje w zastosowaniach metod typowania genetycznego znaczących klinicznie mikroorganizmów w Europie, a także omówiono niektóre techniki stosowane w laboratoriach mikrobiologicznych, z uwzględnieniem ich zdolności aplikacyjnych,...
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A novel method of Mycobacterium tuberculosis complex strain differentiation using polymorphic GC-rich gene sequences.
PublicationTuberculosis is one of the leading infectious diseases. In this work, a new genotyping method of Mycobacterium tuberculosis (Mtb) complex strain is presented. 27 Mtb genomes were analyzed for the presence of length polymorphism within polymorphic GC-rich gene sequences. Four genes, Rv3345c, Rv3507, Rv0747 and Rv3511, showing variation in length depending on the Mtb strain were selected for designing primer sequences flanking variable...
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Microcapsules and their applications in pharmaceutical and food industry.
PublicationMicroencapsulation is a process in which tiny particles or droplets are surrounded by a coating or embedded in a homogeneous or heterogeneous matrix, to generate small capsules in size range from a few to few thousand micrometers. The material inside the microcapsule is referred to as the core, internal phase, or fill, whereas the wall is sometimes called shell, coating, wall material, or membrane. It has found application in...
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Modeling the global atmospheric transport and deposition of mercury to the Great Lakes
PublicationMercury contamination in the Great Lakes continues to have important public health and wildlife ecotoxicology impacts, and atmospheric deposition is a significant ongoing loading pathway. The objective of this study was to estimate the amount and source-attribution for atmospheric mercury deposition to each lake, information needed to prioritize amelioration efforts. A new global, Eulerian version of the HYSPLIT-Hg model was used...
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Analysis of chiral pharmaceutical residues in influent and effluent samples at racemic and enantiomeric level using liquid chromatography-tandem mass spectrometry
PublicationIn this work, two different chromatographic methods for seasonal monitoring of pharmaceutical residue in wastewater samples were developed. In the case of enantiomeric separation of selected compounds, LC-MS technique combining with vancomycin based chiral stationary phase was used. The performance of chiral analysis enabled to monitor the pharmaceutical contamination at the enantiomeric level. The d-SPE procedure was developed...
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Novel Cold Crucible Ultrasonic Atomization Powder Production Method for 3D Printing
Publication: A new powder production method has been developed to speed up the search for novel alloys for additive manufacturing. The technique involves an ultrasonically agitated cold crucible installed at the top of a 20 kHz ultrasonic sonotrode. The material is melted with an electric arc and undergoes pulverization with standing wave vibrations. Several different alloys in various forms, including noble and metallic glass alloys, were...
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Preconditioners with Low Memory Requirements for Higher-Order Finite-Element Method Applied to Solving Maxwell’s Equations on Multicore CPUs and GPUs
PublicationThis paper discusses two fast implementations of the conjugate gradient iterative method using a hierarchical multilevel preconditioner to solve the complex-valued, sparse systems obtained using the higher order finite-element method applied to the solution of the time-harmonic Maxwell equations. In the first implementation, denoted PCG-V, a classical V-cycle is applied and the system of equations on the lowest level is solved...
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Reduktaza NADPH:cytochrom P450 - nie tylko partner cytochromu P450.
PublicationReduktaza NADPH:cytochrom P450 (CPR) zlokalizowana w siateczce śródplazmatycznej większości komórek eukariotycznych jest przedstawicielem rodziny reduktaz diflawinowych. Białko CPR składa się z trzech domen. Jedna z nich, na C-końcu, wiąże cząsteczkę FAD i NADPH, druga, na N-końcu, cząsteczkę FMN, trzecia jest domeną regulacyjną. Enzym ten posiada zdolność jednoczesnego przyjmowania dwóch równoważników jonu hydroniowego z NADPH...
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Thermal Energy Storage with PCMs in Shell-and-Tube Units: A Review
PublicationThe paper presents a survey of the experimental and numerical studies of shell-and-tube systems in which phase change material (PCM) is used. Due to the multitude of design solutions for shell-and-tube systems, the emphasis is placed on double-tube (DT), triplex-tube (TT), and multitube (MT) units. Additionally, only single-pass systems are considered. Particular attention is paid to the method of heat transfer intensification....
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Solar light driven degradation of textile dye contaminants for wastewater treatment – studies of novel polycationic selenide photocatalyst and process optimization by response surface methodology desirability factor
PublicationThe unplanned anthropogenic activities and raced industrial revolution detrimentally causes serious threat to terrestrial and aquatic life. A high discharge of wastewater from industries using dyes affects living organisms and the environment. This paper presents studies on polycationic selenides (PCS) synthesized by hydrothermal methods for photocatalytic degradation of dyes. The synthesized PCS were confirmed by various characterization...
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Power converter interface for urban DC traction substations - solutions and functionality.
PublicationThis paper focuses on extending an urban DC traction substation functionality by means of an additional power converter interface (PCI). In particular, by enabling bidirectional energy exchange between LV DC traction grid, AC grid and V2G chargers. Among other things, the presented material compares general attributes of the most promising DC/DC converters that can be used in a PCI, meet the requirements of galvanic isolation and...
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Similar concentration of surfactants in rural and urban areas
PublicationSince surfactants are used in various products, they end up in surface and wastewater. Surfactants may therefore impact ecosystems and living organisms. Actually, only few anionic surfactants and some alkylphenols are regulated. There is no comprehensive evaluation of surfactants in the atmosphere, surfaces and waters of areas of increasing anthropic levels. Here, we measured the levels of cationic, anionic and nonionic surfactants...
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Metabolomic and antioxidant properties of different varieties and origins of Dragon fruit
PublicationDragon fruit has appealed much concern from consumers as a novelty fruit with potent nutritional and medicinal benefits. Dragon fruit quality warrants comprehensive evaluation, based on the contents of pigments and health- promoting natural compounds in different varieties. This study was aimed to evaluate the differences among dragon fruit varieties extracted with methanol–water (CD3OD-D2O) and methanol (CD3OD) by proton nuclear magnetic...
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Bezpieczeństwo funkcjonalne i ochrona informacji w obiektach i systemach infrastruktury krytycznej - analiza i ocena
PublicationW niniejszym rozdziale monografii przedstawiono bardzo aktualną problematykę związaną z analizą bezpieczeństwa funkcjonalnego rozproszonych systemów sterowania i automatyki zabezpieczeniowej w obiektach infrastruktury krytycznej, wykorzystujących przemysłową sieć komputerową, z uwzględnieniem zagadnień ochrony informacji. W obiektach tego typu systemy sterowania i automatyki zabezpieczeniowej są projektowane jako systemy rozproszone,...
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Energy Losses Due to Imperfect Payment Infrastructure and Payment Instruments
PublicationOne of the strategic objectives of the European Union is a reduction in greenhouse gas emissions and improvement of energy efficiency by at least 32.5% in different areas of the economy by 2030. However, little is known about the impact of payment in retail on energy consumption. The purpose of this paper is to assess the chain of losses of time and energy, and therefore financial losses, that occur due to the imperfection of payment...
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Rubber wastes recycling for developing advanced polymer composites: A warm handshake with sustainability
PublicationRecycling and management of rubber wastes experiences an early-stage maturity in the quest for sustainable and circular materials. Up to now, solutions proposed for sustainable development of rubber wastes are limited, so that properties and performance features of recycled products are inadequate for practical applications. Herein, an experimental protocol is introduced for manufacturing semi-sustainable polymer composites based...
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BADANIE EFEKTYWNOŚCI WYKRYWANIA ANOMALII PROCESOWYCH W DZIAŁANIU TURBINY PAROWEJ ELEKTROWNI JĄDROWEJ PRZY POMOCY METOD WIELOWYMIAROWEJ ANALIZY STATYSTYCZNEJ
PublicationW artykule przedstawiono analizę możliwości wykrywania anomalii procesowych w działaniu turbiny parowej elektrowni jądrowej przy pomocy metod wielowymiarowej analizy statystycznej. Zasymulowano symptomy dwóch rodzajów uszkodzeń turbiny parowej tj. uderzenie wodne oraz, wyciek pary z zaworu części niskoprężnej. Jako narzędzie diagnostyczne wykorzystano Metodę Składników Podstawowych PCA (z ang. Principal Component Analysis). Jako...
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Physicochemical aspects of the application of surfactants and biosurfactants in soil remediation
PublicationZaprezentowano właściwości zwilżające, emulgujące oraz solubilizujące surfaktantów niejonowych Rokanolu L10, Tritonu X-100 oraz biosurfaktantu JBR 425. Jako modelowe zanieczyszczenia wybrano tetrachloroetylen (PCE) oraz o-dichlorobenzen (o-DCB). Stabilność emulsji rosła wraz ze stężeniem surfaktantu. Rozpuszczalnośc PCE i o-DCB była największa w roztworach micelarnych biosurfaktantu JBR.
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Identyfikacja sekwencji markerowych w mikologicznej diagnostyce molekularnej
PublicationProcedury diagnostyki mikologicznej coraz częściej wykorzystują metody molekularne, oparte na analizie kwasów nukleinowych. Pozwala to na skrócenie czasu analizy oraz polepszenie wielu innych, istotnych dla procesu diagnostycznego parametrów takich jak: czułość, powtarzalność, specyficzność oraz potencjał różnicujący. Istotnym etapem przy projektowaniu układów do diagnostyki molekularnej grzybów jest wybór celu molekularnego. Powszechnie...
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Construction and purification of his6-Thermus thermophilus MutS protein.
PublicationGen mutS z termofilnej bakterii Thermus thermophilus zamplifikowano przy użyciu PCR, sklonowano i przeprowadzono jego ekspresję w E. coli. Rekombinantowe białko MutS zawierające oligohistydynową domenę na N-końcu oczyszczono w jednoetapowej procedurze przy wykorzystaniu chromatografii powinowactwaNi(2+). Zdolność do rozpoznania niekomplementarności białka his(6)-MutS potwierdzono w eksperymentach ochrony DNA przed trawieniem...
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Analysis of the reliability of any-hop star network
PublicationZałożono, że sieć ma wielostopniową strukturę gwiaździstą. Jako oceny niezawodności tych sieci przyjęto: 1) średnią liczbę sprawnych par węzłów, które mogą komunikować się wzajemnie; 2) średnią liczbę sprawnych par węzłów, które mogą komunikować się poprzez węzeł centralny; 3) średnią liczbę sprawnych par węzłów, które mogą komunikować się z węzłem centralnym; 4) prawdopodobieństwo zdarzenia, że sprawne węzły mogą komunikować...
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Plastic Debris in the Stomach of the Invasive Signal Crayfish Pacifastacus leniusculus from a Baltic Coastal River
PublicationPollution by plastic debris, widely recognized as a growing global problem [1-3] is caused by the production of synthetic polymers. Over recent years, the production of plastics has increased, while in Europe, fossil-based plastics production has decreased, and recycled plastics production has increased [4]. There are different types of plastics. Some types of plastic ingredients, applied in a wide variety of cosmetics and personal...
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Offshore surface waters of Antarctica are free of microplastics, as revealed by a circum-Antarctic study
PublicationIn 2018, during a circum navigation of Antarctica below 62° S by the sailing boat Katharsis II, the presence of plastics was investigated with surface sampling nets at ten evenly spaced locations (every 36° of longitude). Although fibres that appeared to be plastic (particles up to 2 cm) were found in numbers ranging from 1 particle (0.002 particles per m3) to 171 particles (1.366 particles per m3) per station, a Fourier-transform...
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Novel method of lung area extraction in chest perfusion computed tomography
PublicationChest perfusion computed tomography (pCT) is a useful technique in the medical diagnosis of how organs function. Perfusion CT scans are used to calculate perfusion parameters. In the case of automated methods of lung perfusion parameters calculation, the prior extraction of the lung area is desired to avoid unnecessary calculation in an area outside the lung cross-section and to avoid wasting time on processing signals of no diagnostic...
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Materiały zmiennofazowe do stabilizowania temperatury nawierzchni asfaltowych
PublicationW artykule przedstawiono możliwość wykorzystania lekkiego kruszywa budowlanego modyfikowanego materiałem zmiennofazowym (PCM), jako dodatku do nawierzchni asfaltowej, w celu zwiększenia jej stabilności termicznej przy zachowaniu dotychczasowych właściwości mechanicznych. Cel ten może zostać osiągnięty przez nasączenie porowatych granulek lekkiego kruszywa odpowiednim materiałem zmiennofazowym, co umożliwi magazynowanie określonych...
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Attachment of silica and alumina nanoparticles as studied by QCM
PublicationNanocząstki są wykorzystywane w mikroelektronice do produkcji bardzo płaskich i gładkich powierzchni. Proces produkcji taki materiałów nazywany jest planaryzacją chemiczno-mechaniczną (CMP). Poniewąż nanocząstki na skutek interakcji z produkowanym materiałem specjalistyczntycznym mogą wiązać do jego powierzchni, na skutek czego powodując zanieczyszczenia. Ze względu na wpływ zanieczyszczeń na wydajność i miarodajność produkowanego...
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Information System Purchase and Integration Contingencies When Companies Merge
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The overview of reactors used for the production of precipitated calcium carbonate via carbonation route
PublicationCarbonation is one of the methods for the production of precipitated calcium carbonate (PCC) on the industrial scale. A gaseous CO2 is used as a reagent in this process. The hydrodynamic conditions gener-ated in the reactor affect the course of the process and the characteristics of the precipitated calcium carbonate particles. This paper discusses the construction of standard reactors and new proposed con-struction used for the...
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Monitoring of organic pollutants in coastal waters of the Gulf of Gdańsk, Southern Baltic.
PublicationPrzedstawiono zmiany zawartości zanieczyszczeń organicznych (np. VOC, PAH, PCB, chlorofenoli) w wodach Zatoki Gdańskiej na przestrzeni 5-ciu lat. Zawartość VOX i VOC zmieniała się od kilku ngdm-3 do kilkuset ngdm-3, podczas gdy zawartość chlorofenoli fenoksykwasów była na poziomie kilku ngdm-3. W większości próbek nie wykryto PCB.
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POLLUTANTS PRESENT IN DIFFERENT COMPONENTS OF THE SVALBARD ARCHIPELAGO ENVIRONMENT
PublicationDuring last years an interest in the processes of transport and fate of pollutants to the polar regions located distantly from industrial centers, has significantly increased. The current analytical techniques enabling conducting studies prove that the Arctic regions (in the past considered as a pollution free area) have become an area of highly intensive anthropopresion. Svalbard archipelago stands out from the other polar regions...
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Two-Dimensional Gas Chromatography Coupled With Mass Spectrometry in Food Analysis
PublicationThe development of instrumental analytical techniques provided the opportunity for in-depth characterization of many food matrices. In particular, the use of gas chromatography coupled with mass spectrometry gives impressive results in terms of quality and authenticity testing, conducting food freshness evaluations and contamination assessments. A new variant of gas chromatography, namely two-dimensional gas chromatography (GC...
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An integral-differential method for impedance determination of the hydrogen oxidation process in the presence of carbon monoxide in the proton exchange membrane fuel cell
PublicationThe impedance of a proton exchange membrane fuel cell powered by hydrogen contaminated with carbon monoxide, ranging from 150 to 300 ppb, is measured and discussed. The tested range of CO concentration complied with the fuel standard specified in the ISO standards. Studies of influence of CO contamination on operation of PEMFC are crucial for further development and commercialization of fuel cells for automotive applications. Based...
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Effectiveness of a dual surface modification of metallic interconnects for application in energy conversion devices
PublicationA dual surface modification of an SOFC metallic interconnect with a Gd2O3 layer and an MnCo2O4 coating was evaluated. The tested samples were oxidized for 7000 h in air at 1073 K. Oxidation products were characterized using XRD, SEM-EDS, and confocal Raman imaging, and ASR was measured. The effect of gadolinium segregation at grain boundaries in Cr2O3 was evaluated using S/TEM-EDS. Area specific-resistance was measured and fuel...
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Photogeneration of charge carriers pairs in pentacene layers.
PublicationAnalizowano mechanizmy odpowiedzialne za powstawanie par nośników ładunku w polikrystalicznych warstwach pentacenu.
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Charakterystyki pojemnościowo-zasięgowo sieci komórkowej LTE wykorzystującej metodę Partial Frequency Reuse
PublicationW referacie przedstawiono wyniki badań charakterystyk pojemnościow-zasięgowych sieci komórkowej LTE, w której zastosowano metodę ponownego wykorzystania pasma PFR. Wyniki badań umożliwiają ocenę efektywności wykorzystania zasobów fizycznych, w zależności od metody podziału obszaru komórki na podobszary o różnym sposobie przydziału tych zasobów. Mogą być one użyteczne do oceny efektywności metody PFR oraz do projektowania i optymalizacji...
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Development of nanoscale morphology and role of viscoelastic phase separation on the properties of epoxy/recycled polyurethane blends
PublicationA novel and cost-effective approach towards the modification of epoxy matrix has been developed using recycled polyurethane for the first time without sacrificing any of the intrinsic properties of the resin. Polyurethane, recycled from waste foam by glycolysis process (RPU), was found to be very effective in improving the properties of the thermosetting resin based on Diglycidyl ether of bisphenol-A (DGEBA). The effect of the...
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Catalytic activity of Ni-MgAl2O4 modified with transition metal (Ti, Mo, W) carbides as potential catalysts for resource recovery via dry reforming of waste plastics
PublicationThe growing amounts of plastic waste and CO2 emissions are two environmental threats that require urgent attention. Pyrolysis combined with dry reforming (PCDR) is a technology that allows both CO2 utilization and resource recovery from waste plastic. New catalysts for PCDR are crucial for developing efficient and stable processes that can be widely implemented in the industry. In this study, Ni/MgAl2O4 catalysts modified using different...
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Synthesis and characterization of novel aliphatic polyurethanes for tissue engineering applications
PublicationSummarizing, in this thesis was described the synthesis of novel PUR system, which was obtained by using aliphatic diisocyanate (HDI), amorphous macrodiol (PEBA) and chain extender (BDO). This PUR system was established as suitable for TE purpose and successfully modified with AA, which as expected improved its biocompatibility. According to this, AA-modified HDI-based PURs is the PUR system ready for further studies including...
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Identification of evolutionary conserved DNA sequence and corresponding S21 ribosomal protein region for diagnostic purposes of all Borrelia spirochetes
PublicationIt is still under investigation, whether all Borrelia sp. causing Lyme borreliosis and other diseases are already identified and properly classified as human pathogens. For this reason, it is of great importance to develop a diagnostic ELISA test that detects all Borrelia sp. The aim of this study was to identify conserved DNA and protein regions present in all currently known Borrelia sp. In experimental studies 31 available Borrelia...
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Structure and the Biochemical Potential of the Bacterial Community in Wastewater Treatment Plant Effluent and in Receiving Waters: Northern Poland Case Study
PublicationWastewater treatment processes are monitored mainly in terms of biogenic substance removal efficiency. Little is known about the treated wastewater microbiome and its influence on the recipient. In this study, a wide range of methods (cultivation, microscopic analysis, New Generation Sequencing and Real Time PCR) were employed to determine the bacterial community composition of the treated wastewater and its receiver. Preliminary...