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Search results for: psychrophilic bacteria
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Crystal structures of the DsbG disulfide isomerase reveal an unstable disulfide
PublicationDsb proteins control the formation and rearrangement of disulfide bonds during the folding of secreted and membrane proteins in bacteria. DsbG, a member of this family, has disulfide bond isomerase and chaperone activity. Here, we present two crystal structures of DsbG at 1.7- and 2.0-Angstrom resolution that are meant to represent the reduced and oxidized forms, respectively. The oxidized structure, however, reveals a mixture...
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The Anti-Staphylococcal Potential of Ethanolic Polish Propolis Extracts
PublicationAbstract: The principal objective of this study was to determine the anti-staphylococcal potential of ethanol extracts of propolis (EEPs). A total of 20 samples of propolis collected from apiaries located in different regions of Poland were used in the study. The two-fold broth microdilution method revealed some important differences in the antimicrobial activity of investigated EEPs. Up to the concentration of 4096 µg/mL no activity...
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Kinetic characterization of hydrogen sulfide inhibition of suspended anammox biomass from a membrane bioreactor
PublicationThe inhibition effects of hydrogen sulfide (H2S) on anammox-enriched biomass from a laboratory membrane reactor were analyzed in a series of batch respirometric experiments. The determined half maximal inhibitory concentration (IC50) was 4.67 mg H2S-S L−1 at the constant pH = 7.0 and the total sulfide concentration varying between 1 and 15 mg TS-S L−1. In another test, the IC50 was found to be 4.25 mg H2S-S L−1 under a constant...
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Surgical Site Infection after Breast Surgery: A Retrospective Analysis of 5-Year Postoperative Data from a Single Center in Poland
PublicationBackground and Objectives: Surgical site infection (SSI) is a significant complication of non-reconstructive and reconstructive breast surgery. This study aimed to assess SSI after breast surgery over five years in a single center in Poland. The microorganisms responsible for SSI and their antibiotic susceptibilities were determined. Materials and Methods: Data from 2129 patients acquired over five years postoperatively by the...
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Antibiotic resistance in wastewater, does the context matter? Poland and Portugal as a case study
PublicationAntibiotic resistance has been considered a major human health threat that may endanger the success of medicine. Recent studies have unveiled worldwide asymmetries of antibiotic resistance occurrence, being factors as diverse as climate, socioeconomic, or antibiotic use possible drivers of such asymmetric distribution. In Europe, where clinical antibiotic resistance is surveyed for more than 20 years, the European Center for Disease...
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Composite Polyurethane-Polylactide (PUR/PLA) Flexible Filaments for 3D Fused Filament Fabrication (FFF) of Antibacterial Wound Dressings for Skin Regeneration
Publicationhis paper addresses the potential application of flexible thermoplastic polyurethane (TPU) and poly(lactic acid) (PLA) compositions as a material for the production of antibacterial wound dressings using the Fused Filament Fabrication (FFF) 3D printing method. On the market, there are medical-grade polyurethane filaments available, but few of them have properties required for the fabrication of wound dressings, such as flexibility...
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Probiotic potential of Bacillus Isolates from Polish Bee Pollen and Bee Bread
PublicationThe main goal of this study was the evaluation of the probiotic potential of 10 Bacillus spp. strains isolated from 5 bee bread and 3 bee pollen samples. The antagonistic interaction with Staphylococcus aureus and Escherichia coli was a primary criterion for the preliminary selection of the isolates. Three out of ten strains—PY2.3 (isolated from pollen), BP20.15 and BB10.1 (both isolated from bee bread)—were found to be possible...
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Construction and purification of his6-Thermus thermophilus MutS protein.
PublicationGen mutS z termofilnej bakterii Thermus thermophilus zamplifikowano przy użyciu PCR, sklonowano i przeprowadzono jego ekspresję w E. coli. Rekombinantowe białko MutS zawierające oligohistydynową domenę na N-końcu oczyszczono w jednoetapowej procedurze przy wykorzystaniu chromatografii powinowactwaNi(2+). Zdolność do rozpoznania niekomplementarności białka his(6)-MutS potwierdzono w eksperymentach ochrony DNA przed trawieniem...
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Hanna Staroszczyk dr hab. inż.
PeopleAbsolwentka Wydziału Inżynierii i Technologii Chemicznej Politechniki Krakowskiej, od 2007 roku pracuje w Katedrze Chemii, Technologii i Biotechnologii Żywności Wydziału Chemicznego Politechniki Gdańskiej. Pracowała w Politechnice Krakowskiej, Akademii Rolniczej w Krakowie, Institute of Food Research w Norwich, Academia Sinica w Tajpej oraz University of Arkansas w Fayetteville. W 2013 roku uzyskała stopień doktora habilitowanego...
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Modelling of dark fermentation of glucose and sour cabbage
PublicationIn the article, modified Anaerobic Digestion Models 1 (ADM-1) was tested for modelling dark fermentation for hydrogen production. The model refitting was done with the Euler method. The new model was based on sets of differential equations. The model was checked for hydrogen production from sour cabbage in batch and semi-batch in 5 g VSS (volatile solid suspension)/L and at the semi-batch process from glucose at 5 and 10 g VSS/L....
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Unmanned mine counter systems for South Baltic conditions.
PublicationPrzedstawiono warunki środowiskowe panujące na Bałtyku Południowego oraz opracowane w Polsce systemy przeciwminowe oparte na bezzałogowych statkach głębinowych. System głębinowy pk. ''Ukwiał'' wykorzystuje zdalnie sterowany, zasilany kablem statek głębinowy do przenoszenia ładunków wybuchowych. Jako alternatywne rozwiązanie przedstawiono urządzenie jednorazowego użytku w postaci statku głębinowego z obrotową głowicą bojową....
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Dostęp do czasopism chemicznych wydawnictwa Thieme
EventsBiblioteka zaprasza do korzystania z dostępu testowego do kolekcji czasopism chemicznych wydawnictwa Thieme. Dostęp jest aktywny ze strony domowej Biblioteki i potrwa do 28 lutego 2018 r.
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BIKO-ESBL Clinically significant bacteria in the aquatic environment in the context of the spread of resistance traits – molecular analysis of the phenomenon
ProjectsProject realized in Department of Sanitary Engineering
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Analiza osadów dennych pod kątem ich właściwości nawozowych
PublicationThe analysis of bottom sediments in terms of their fertilizing properties. In paper the characterize of sediments as product to nature usage was done. Analyzed material was taken from ecological treatment system located in wastewater treatment plant in Swarzewo (Pomerania Region) about flow Q= 6000 m3/d. Measurements of dry matter and organic matter content, as well as nitrogen concentrations and phosphorus fractions: loosely...
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Bioassays as one of the Green Chemistry tools for assessing environmental quality: A review
PublicationFor centuries, mankind has contributed to irreversible environmental changes, but due to the modern science of recent decades, scientists are able to assess the scale of this impact. The introduction of laws and standards to ensure environmental cleanliness requires comprehensive environmental monitoring, which should also meet the requirements of Green Chemistry. The broad spectrum of Green Chemistry principle applications should...
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Recovery of Anammox Biomass at Short Hydraulic Retention Time in a MBR Reactor
PublicationThe anammox system has been consider as an economical option for treating high concentration of nitrogen and poor in biodegradable orgaednic carbon wastewaters. This process is attractive option compared with conventional nitrogen removal because it provides a significant saving in aeration and organic addition for denitrification. The anammox technology has been applied mostly for concentrated nitrogenous wastewater containing...
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Estimating the Impact of Inflow on the Chemistry of Two Different Caldera Type Lakes Located on the Bali Island (Indonesia)
PublicationThis paper is a preliminary attempt to assess the composition of pollutants in two different caldera lakes situated in the Indonesian Archipelago: Batur and Bratan. Both lakes are characterized by largely different physico-chemical regimes; Batur Lake is located in an area that is currently volcanically active, unlike Bratan Lake. The latter is much smaller and shallower than Batur Lake. The concentration of pollutants in the Indonesian...
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The influence of small intestinal mucus structure on particle transport ex vivo
PublicationMucus provides a barrier to bacteria and toxins while allowing nutrient absorption and waste transport. Unlike colonic mucus, small intestinal mucus structure is poorly understood. This study aimed to provide evidence for a continuous, structured mucus layer and assess the diffusion of different sized particles through it. Mucus structure was assessed by histology and immunohistochemistry. Ultra-structure was assessed by scanning...
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The effect of nanoparticles size on photocatalytic and antimicrobial properties of Ag-Pt/TiO2 photocatalysts
PublicationAg-Pt-modified TiO2 nanocomposites were synthesized using the sol–gel method. Bimetallic modified TiO2 nanoparticles exhibited improved photocatalytic activity under visible-light irradiation, better than monometallic Ag/TiO2 and Pt/TiO2 nanoparticles (NPs). All modified powders showed localized surface plasmon resonance (LSPR) in visible region. The photocatalysts’ characteristics by X-ray diffractometry (XRD), scanning transmission...
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Structural and dynamic changes adopted by EmrE, multidrug transporter protein—Studies by molecular dynamics simulation
PublicationEmrE protein transports positively charged aromatic drugs (xenobiotics) in exchange for two protons and thus provides bacteria resistance to variety of drugs. In order to understand how this protein may recognize ligands, the monomer and asymmetric apo-form of the EmrE dimer embedded in a heterogeneous phospholipid (POPE + POPG) membrane were studied by molecular dynamics simulations. Dimer is regarded as a functional form of the...
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The influence of electromagnetic pollution on living organisms – historical trends and forecasting changes
PublicationCurrent technologies have become a source of omnipresent electromagnetic pollution from generated electromagnetic fields and resulting electromagnetic radiation. In many cases this pollution is much stronger than any natural sources of electromagnetic fields or radiation. Wireless and radio communication, electric power transmission or devices in daily use such as smartphones, tablets and portable computers every day expose people...
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Influence of dissolved organic nitrogen on surface waters
PublicationThe aim of this study was to determine the susceptibility of dissolved organic nitrogen (DON) contained in biologically treated wastewater disposed from municipal wastewater treatment plants (WWTPs) to biodegradability and bioavailability in a water environment. Additionally an evaluation was performed of the participation of this organic nitrogen fraction, including bioavailable DON (bDON), in the nitrogen balance for the Baltic...
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Optimization of the Aeration Strategies in a Deammonification Sequencing Batch Reactor for Efficient Nitrogen Removal and Mitigation of N2O Production
PublicationIn deammonification systems, nitrite-oxidizing bacteria (NOB) suppression and nitrous oxide (N2O) mitigation are two important operational objectives. To carry out this multivariable analysis of response, a comprehensive model for the N cycle was developed and evaluated against experimental data from a laboratory-scale deammonification granular sludge sequencing batch reactor. Different aeration strategies were tested, and the manipulated...
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A global multinational survey of cefotaxime-resistant coliforms in urban wastewater treatment plants
PublicationThe World Health Organization Global Action Plan recommends integrated surveillance programs as crucial strategies for monitoring antibiotic resistance. Although several national surveillance programs are in place for clinical and veterinary settings, no such schemes exist for monitoring antibiotic-resistant bacteria in the environment. In this transnational study, we developed, validated, and tested a low-cost surveillance and...
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Stannates, titanates and tantalates modified with carbon and graphene quantum dots for enhancement of visible-light photocatalytic activity
PublicationMost efforts in heterogeneous photocatalysis are focused on development of new and stable photoactive materials efficient in degradation of various pollutants under visible-light irradiation. In this regard, the wide-bandgap perovskite semiconductors, i.e., SrTiO3 (titanate), SrSnO3 (stannate) and AgTaO3 (tantalate), were prepared by a solvothermal method, and then modified with carbon quantum dots (CQDs) or graphene quantum dots...
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The Influence of Sulfate on Anaerobic Ammonium Oxidation in a Sequencing Batch Reactor
PublicationAnaerobic ammonia-oxidizing bacteria have a more comprehensive metabolism than expected - there may be other electron acceptors that oxidize ammonium nitrogen under anaerobic conditions, in addition to the well-known nitrite nitrogen, one of which is sulfate in the sulfammox process. Sulfate-containing compounds are part of the medium for the anammox process, but their concentrations are not particularly high (0.2 g MgSO4 ∙ 7H2O/dm3...
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Checkpoints that regulate balanced biosynthesis of lipopolysaccharide and its essentiality in Escherichia coli
PublicationThe outer membrane (OM) of Gram-negative bacteria, such as Escherichia coli, is essential for their viability. Lipopolysaccharide (LPS) constitutes the major component of OM, providing the permeability barrier, and a tight balance exists between LPS and phospholipids amounts as both of these essential components use a common metabolic precursor. Hence, checkpoints are in place, right from the regulation of the first committed step...
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Multicopy Suppressor Analysis of Strains Lacking Cytoplasmic Peptidyl-Prolyl cis/trans Isomerases Identifies Three New PPIase Activities in Escherichia coli That Includes the DksA Transcription Factor
PublicationConsistent with a role in catalyzing rate-limiting step of protein folding, removal of genes encoding cytoplasmic protein folding catalysts belonging to the family of peptidyl-prolyl cis/trans isomerases (PPIs) in Escherichia coli confers conditional lethality. To address the molecular basis of the essentiality of PPIs, a multicopy suppressor approach revealed that overexpression of genes encoding chaperones (DnaK/J and GroL/S),...
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Synthesis of green benzamide-decorated UiO-66-NH2 for biomedical applications
PublicationMetal-organic frameworks (MOFs) biocompatible systems can host enzymes/bacteria/viruses. Herein we synthesized a series of fatty acid amide hydrolase (FAAH)-decorated UiO-66-NH2 based on Citrus tangerine leaf extract for drug delivery and biosensor applications. Five chemically manipulated FAAH-like benzamides were localized on the UiO-66-NH2 surface with physical interactions. Comprehensive cellular and molecular analyses were...
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Brewery spent grain valorization through fermentation: Targeting biohydrogen, carboxylic acids and methane production
PublicationThis study investigated three different fermentation approaches to explore the potential for producing biohydrogen, carboxylic acids, and methane from hydrolysates of thermally dilute acid pretreated brewer's spent grains (BSG). Initially, the research focused on maximizing the volumetric hydrogen production rate (HPR) in the continuous dark fermentation (DF) of BSG hydrolysates by varying the hydraulic retention time (HRT). The...
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An overview of fermentation in the food industry - looking back from a new perspective
PublicationFermentation is thought to be born in the Fertile Crescent, and since then, almost every culture has integrated fermented foods into their dietary habits. Originally used to preserve foods, fermentation is now applied to improve their physicochemical, sensory, nutritional, and safety attributes. Fermented dairy, alcoholic beverages like wine and beer, fermented vegetables, fruits, and meats are all highly valuable due to their...
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Boron-doped diamond nanosheet volume-enriched screen-printed carbon electrodes: a platform for electroanalytical and impedimetric biosensor applications
PublicationThis paper focuses on the development of a novel electrode based on boron-doped diamond nanosheet full-volume-enriched screen-printed carbon electrodes (BDDPE) for use as an impedimetric biosensor. Impedimetric biosensors offer high sensitivity and selectivity for virus detection, but their use as point-of-care devices is limited by the complexity of nanomaterials’ architecture and the receptor immobilisation procedures. The study...
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Wastewater reuse in agriculture: Prospects and challenges
PublicationSustainable water recycling and wastewater reuse are urgent nowadays considering water scarcity and increased water consumption through human activities. In 2015, United Nations Sustainable Development Goal 6 (UN SDG6) highlighted the necessity of recycling wastewater to guarantee water availability for individuals. Currently, wastewater irrigation (WWI) of crops and agricultural land appears essential. The present work overviews...
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Nowoczesna koncepcja rozwoju transportu trolejbusowego - projekt Slide-In
PublicationEwolucja komunikacji trolejbusowej zachodzi w wielu europejskich miastach. Wraz z rozwojem alternatywnych źródeł zasilania (baterie trakcyjne, supekondensatory, spalinowe agregaty prądotwórcze) trolejbusy stają się mniej uzależnione od sieci trakcyjnej, a przy tym bardziej efektywne ekonomicznie. Jednoczesny rozwój autobusów elektrycznych i wiążące się z nimi problemy eksploatacyjne skłaniają do refleksji nad wykorzystaniem zalet...
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Zastosowanie ultrafiltracji do dezynfekcji i doczyszczania ścieków oczyszczonych = Ultrafiltration process in disinfection and advanced treatment of tertiary treated wastewater
PublicationW pracy przedstawiono wyniki badań nad ultrafiltracją komunalnych ścieków oczyszczonych. Ustalono, że ultrafiltracja jest skuteczną metodą dezynfekcji. W permeacie obserwowano jedynie pojedyncze komórki bakterii wskaźnikowych. Proces ultrafiltracji umożliwia dalszą poprawę parametrów fizyczno-chemicznych ścieków oczyszczonych. Najlepiej usuwane były mętność oraz fosfor ogólny, dobre efekty uzyskano w usuwaniu ChZT oraz BZT5, w...
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Dynamic simulation as a tool for evaluation of the nitrogen removal capabilities at the "Gdańsk-Wschód" WWTP
PublicationCelem badań było przedstawienie możliwości zastosowania złożonego modelu biokinetycznych ASM2d do symulacji procesu usuwania azotu w oczyszczalni ścieków ''Wschód'' w Gdańsku. Szybkość procesów nitryfikacji i denitryfikacji została wyznaczona w warunkach laboratoryjnych za pomocą tzw. testów zlewkowych. Wyniki tych badań zostały wykorzystane do kalibracji modelu, w trakcie której zmieniano wartości tylko 5 parametrów kinetycznych....
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A new cold-active β-galactosidase from Arthrobacter sp. S3* - gene cloning, overexpression, purification and properties
PublicationA psychrotrophic bacterium producing a cold-active β-galactosidase was isolated from Spitsbergen soil and classified as Arthrobacter sp. S3*. The gene encoding β-galactosidase was isolated from the genomic DNA library, sequenced, cloned, expressed in Escherichia coli, purified by ion exchange chromatography and characterized. The Arthrobaster sp. S3* β-galactosidase is a homotrimeric enzyme composed of 74,4 kDa subunits. It is...
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Single-stranded DNA-binding proteins (SSBs) - sources and applicationsin molecular biology
PublicationBiałka wiążące się do jednoniciowego DNA (SSB) odgrywają ważną rolę w replikacji, rekombinacji i naprawie DNA u bakterii, archea i eukariota. Ostatnio wzrosło zainteresowanie białkami SSB jako przydatnymi narzędziami w metodach badawczych biologii molekularnej, analitycznych i diagnostycznych. Większość znanych prokariotycznych białek SSB zbudowanych jest z czterech podjednostek (homotetramer) z jedną domeną wiążąca (OB) jednoniciowe...
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New conjugates of tuftsin and muramyl dipeptide as stimulators of human monocytes-derived dendritic cells
PublicationMuramyl dipeptide (MDP) and tuftsin are known biologically active compound displaying a significant influence on various cell populations of innate immune response. MDP, as a fragment of bacterial cell wall, stimulates not only macrophages and monocytes, but also dendritic cells. In contrast, little is known about tuftsin influence on these cells. Therefore it seemed vital to access whether tuftsin or its derivatives conjugated...
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Molecular modeling and evaluation of novel dibenzopyrrole derivatives as telomerase inhibitors and potential drug for cancer therapy
PublicationDuring previous years, many studies on synthesis, as well as on anti-tumor, anti-inflammatory and anti-bacterial activities of the pyrazole derivatives have been described. Certain pyrazole derivatives exhibit important pharmacological activities and have proved to be useful template in drug research. Considering importance of pyrazole template, in current work the series of novel inhibitors were designed by replacing central...
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C-reactive protein (CRP) evaluation in human urine using optical sensor supported by machine learning
PublicationThe rapid and sensitive indicator of inflammation in the human body is C-Reactive Protein (CRP). Determination of CRP level is important in medical diagnostics because, depending on that factor, it may indicate, e.g., the occurrence of inflammation of various origins, oncological, cardiovascular, bacterial or viral events. In this study, we describe an interferometric sensor able to detect the CRP level for distinguishing between...
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Modelling of axial magnetic field effect on electric arc in ablation capillaries
PublicationBadano wpływ osiowego pola magnetycznego na łuk elektryczny w kapilarze ablacyjnej o średnicy do 3 mm. Wyniki porównywano z kapilarą ceramiczną. Łuk zasilany był z baterii kondensatorów prądem do około 1200 A. Stosowano pole magnetyczne wolnozmienne oraz wysokoczęstotliwościowe o indukcji do 10 T. Stwierdzono nawet 3-krotny wzrost napięcia łukowego pod wpływem osiowego pola magnetycznego w kapilarze gazującej, przy braku reakcji...
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Ocena ekotoksyczności próbek osadów portowych z morskiego portu Gdańsk i morskiego portu Gdynia
PublicationW pracy przedstawiono wyniki badań ekotoksykologicznych (wobec bakterii Vibrio fischeri i małżoraczka Heterocypris incongruens) osadów z portu w Gdańsku i Gdyni. Osady uśrednione z rdzeni z obu portów można określić jako niestwarzające zagrożenia (poza dwiema próbkami z portu w Gdyni). Wybrane próbki pobierane z określonych głębokości wykazywały znacznie wyższą toksyczność wobec organizmów wskaźnikowych niż próbki uśredniane. Niska...
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Application of Peracetic Acid for Biological Foam Elimination in the SBR Bioreactor
PublicationPrzedstawiono wyniki wstępnych badań nad zastosowaniem kwasu nadoctowego (PAA) do likwidacji piany biologicznej, spowodowanej przez bakterię nitkowatą Microthrix parvicella. Wykazano, że okresowe zraszanie powierzchni piany małymi dawkami kwasu nadoctowego (rzędu kilkudziesięciu ml 1% roztworu PAA/na 1 m2 piany o grubości 1 cm) powoduje niemal natychmiastwy zanik piany, wytworzonej na powierzchni osadu czynnego w bioreaktorze...
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Fluctuation-Enhanced Sensing for Biological Agent Detection and Identification
PublicationPrzedstawiono wcześniejsze wyniki badań dotyczące trzech różnych sposobów wykrywania obecności substancji biologicznych za pomocą zjawisk fluktuacyjnych: 1) wirusów wnikających do komórek, 2) zapachów emitowanych przez mikroby, 3) rozkładu widma i wartości chwilowych szumów podczas rozpraszania światła używanego do wykrywania zarodników na podstawie wyznaczenia współczynnika dyfuzji opisująceo ich ruch.We survey and show our earlier...
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Biofumigacja jako alternatywna, przyjazna środowisku technologia ochrony roślin uprawnych
PublicationW dobie rosnącego zainteresowania zdrowym trybem życia coraz częściej buntujemy się przeciwko syntetycznym związkom chemicznym dodawanym do żywności i stosowanym w rolnictwie. Duże kontrowersje od dawna budzi wykorzystywannie syntetycznych pestycydów w ochronie upraw, szczególnie roślin jadalnych, toteż poszukuje się bardziej ekologicznych technologii, wśród których na największą uwagę zasługuje biofumigacja. Polega ona na wykorzystaniu...
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Rationalization of chemicals application in WWTP ''Wschod'' in Gdansk (Poland)- a case study.
PublicationW referacie przedstawiono wyniki z 4 lat doświadczeń z eksploatacji oczyszczalni ścieków 'Wschód' w Gdańsku, związanych z racjonalnym wykorzystaniem reagentów chemicznych w następujących działaniach technologicznych: wspomaganiu biologicznej defosfatacji, strącaniu fosforanów z odcieków odprowadzanych z odwadniania przefermentowanych osadów, zwalczaniu skutków nadmiernego rozwoju bakterii nitkowatych, zmniejszaniu przekroczeń dopuszczalnych...
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Patryk Wiśniewski mgr inż.
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Pojazdy elektryczne - rozwój technologii. Układy ładowania i współpraca z siecią elektroenergetyczną
PublicationW artykule przedstawiono zagadnienia związane z pojazdami elektrycznymi o zasilaniu akumulatorowym. Wskazano aktualne trendy rozwojowe oraz możliwości eksploatacyjne. Pokazano przykładowe rozwiązanie prototypowego pojazdu i zagadnienia sterowania układem napędowym oraz optymalnym rozdziałem energii. Poruszono problemy wpływu dużej liczby samochodów elektrycznych na sieć elektroenergetyczną - wzrost zapotrzebowania na energię. Wskazano...
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Układy zasilania energią resztkową z urządzeń grzewczych
PublicationPozyskiwanie energii resztkowej z różnorodnych źródeł ma za zadanie odzyskanie energii z nietypowych źródeł takich jak np.: drgania, ruch mas powietrza, efekt termiczny. Energia pozyskiwana z tych niekonwencjonalnych źródeł jest obecnie wykorzystywana do zasilania sieci sensorowych, czy mikrokontrolerów o niskich poborach mocy. Stosowanie technologii pozyskiwania energii resztkowej pozwala wyeliminować konieczność doprowadzania...